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Molecular design of AIDS therapeutics based on molecular recognition of enzymes.

Research Project

Project/Area Number 07308067
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section総合
Research Field Bioorganic chemistry
Research InstitutionKyoto Pharmaceutical University

Principal Investigator

KISO Yoshiaki  Faculty of Pharmaceutical Sciences, Kyoto Pharmaceutical University, Professor, 薬学部, 助教授 (40089107)

Co-Investigator(Kenkyū-buntansha) KIMURA Tooru  Faculty of Pharmaceutical Sciences, Kyoto Pharmaceutical University, Assistant, 薬学部, 助手 (70204980)
FUJIWARA Yoichi  Faculty of Pharmaceutical Sciences, Kyoto Pharmaceutical University, Assistant, 薬学部, 助手 (60199396)
AKAJI Kenichi  Faculty of Pharmaceutical Sciences, Kyoto Pharmaceutical University, Associate P, 薬学部, 助教授 (60142296)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥4,000,000 (Direct Cost: ¥4,000,000)
Fiscal Year 1996: ¥4,000,000 (Direct Cost: ¥4,000,000)
KeywordsHIV Protease Inhibitors / Enzyme・Inhibitor Complex / Substrate Transition State Analog / Peptide synthesis / Conformational Analysis / X-ray Crystallography / Drug Resistant Virus / Anti-AIDS Drug / コンフォメーション解析 / コンフォーメーション解析
Research Abstract

Based on the substrate-transition state concept, we have succeeded to design and synthesize a highly selective and potent HIV protease inhibitor (KNI-272). Since KNI-272 was rationally designed based on the action mechanism of HIV protease, it exhibits low cytotoxicity and interacts selectively with HIV protease active site. These results strongly attracted the attention of the Directro of National Cancer Institute, U.S.A., and we have already started research collaboration with a research group there.
In order to make a further progress of our research, we carried out the molecular structural analysis of mutant viruses and anti-AIDS drug complexed with mutant enzymes, and rationally designed novel anti-AIDS drugs considering the drug-enzyme interactions. The results of our research are highly expected as the strategy against resistant HIV.The compounds obtained by our research are considered as promising anti-AIDS drugs to overcome side effect and resistance.
KNI-272-insensitive virus strains were identified. Based on the amino acid sequence, the mutated proteases were synthesized by genetic engineering or chemical methods. We analyzed the interaction between mutant enzymes and anti-AIDS drugs and examined the active conformation of the drugs. Potent inhibitors such as KNI-272 were shown to have highly constrained conformation by x-ray crystallography, NMR and molecular modeling.
Furthermore, based on the analysis of enzyme-inhibitor interaction, we have analyzed the essential functional groups of the inhibitor participating in the interaction. We designed and synthesized HIV protease inhibitors aiming at ideal anti-AIDS drugs without resistance and side effects. Dipeptide derivatives with high HIV protease inhibiting activity were obtained.

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (24 results)

All Other

All Publications (24 results)

  • [Publications] Yoshiaki Kiso: "Design and synthesis of substrate-based peptidomimetic HIV protease inhibitors containing the hydroxymethylcarbonyl isostere." Biopolymers. 40・2. 235-244 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yun-Xing Wang: "Solution NMR Evidence That the HIV-1 Protease Catalytic Aspartyl Groups Have Different Ionization States in the Complex Formed with the Asymmetric Drug KNI-272." Biochemistry. 35・31. 9945-9950 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yasushi Ohno: "Solution conformations of KNI-272,a tripeptide HIV protease inhibitor designed on the basis of substrate transition state : Determined by NMR spectroscopy and simulated annealing calculations." Bioog.Med.Chem.4・9. 1565-1572 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yun-Xing Wang: "Bound water molecules at the interface between the HIV-1 protease and a potent inhibitor,KNI-272,determined by NMR." J.Am.Chem.Soc.118・49. 12287-12290 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] A.Kiriyama: "Binding characteristics of KNI-272 to plasma proteins,a new potent tripeptide HIV protease inhibitor." Biopharmaceut.Drug Disp.17・9. 739-751 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Satoshi Yamaguchi: "Synthesis of HIV protease dipeptide inhibitors and prodrugs." Peptide Chemistry. 1996. 297-300 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yoshiaki Kiso: "Design and synthesis of substrate-based peptidominetic HIV protease inhibitors containing the hydroxymethylcarbonyl isostere." Biopolymers. 40-2. 235-244 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yun-Xing Wang: "Solution NMR Evidence That the HIV-1 Protease Catalytic Aspartyl Groups Have Different Ionization States in the Complex Formed with the Asymmetric Drug KNI-272" Biochemistry. 35-31. 9945-9950 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yasushi Ohno: "Solution conformations of KNI-272, a tripeptide HIV protease inhibitor designed on the basis of substrate transition state : Determined by NMR spectroscopy and simulated annealing calculations." Bioorg.Med.Chem.4-9. 1565-1572 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yun-Xing Wang: "Bound water molecules at interface between the HIV-1 protease and a potent inhibitor, KNI-272, determined by NMR." J.Am.Chem.Soc.118-49. 12287-12290 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] A.Kiriyama: "Binding characteristics of KNI-272 to plasma proteins, a new potent tripeptide HIV protease inhibitor." Biopharmaceut.Drug Disp. 17-9. 739-751 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Satoshi yamaguchi: "Synthesis of HIV protease dipeptide inhibitors and prodrugs." Peptide Chemistry. 1996. 297-300 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yoshiaki Kiso: "Design and synthesis of substrate-based peptidomimetic HIV protease inhibitors containing the hydroxymethylcarbonyl isostere." Biopolymers. 40・2. 235-244 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 木曽良明: "AIDS治療薬としてのHIVプロテアーゼ阻害薬-変異ウイルスと人類の共生は可能か-." 医学のあゆみ. 177・13. 962-968 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yun-Xing Wang: "Solution NMR Evidence That the HIV-1 Protease Catalytic Aspartyl Groups Have Different Ionization States in the Complex Formed with the Asymmetric Drug KNI-272." Biochemistry. 35・31. 9945-9950 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yasushi Ohno: "Solution conformations of KNI-272,a tripeptide HIV protease inhibitor designed on the basis of substrate transition state : Determined by NMR spectroscopy and simulated annealing calculations." Bioorg.Med.Chem.4・9. 1565-1572 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yun-Xing Wang: "Bound water molecules at the interface between the HIV-1 protease and a potent inhibitor,KNI-272,determined by NMR." J.Am.Chem.Soc.118・49. 12287-12290 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] A.Kiriyama: "Binding characteristics of KNI-272 to plasma proteins,a new potent tripeptide HIV protease inhibitor." Biopharmaceut.Drug Disp.17・9. 739-751 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yoshiaki Kiso: "Design and synthesis of HIV protease inhibitors containing allophenylnorstatine as a transition-state mimic." Adv. Exp. Med. Biol.362. 413-423 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] E. T. Baldwin: "Structure of HIV-1 protease with KNI-272: A transition state mimetic inhibitor containing allophenylnorstatine." Adv. Exp. Med. Biol.362. 445-449 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] M. Sugawara: "Absorption of new HIV-1 protease inhibitor, KNI-272, after intraduodenal and intragastric administrations to rats: Effect of solvent." Biopharmaceut. Drug Disp.16. 269-277 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] E. T. Baldwin: "Structure of HIV-1 protease with KNI-272, a tight-binding transition-state analog containing allophenylnorstatine." Structure. 3. 581-590 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 木曽良明: "ウイルス蛋白プロセッシングの阻害,HIVプロテアーゼインヒビター." Mebio. 12. 78-86 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Kenichi Akaji: "Efficient synthesis of alamethicin F-30 using a chloro imidazolidium coupling reagent, CIP." Tetrahedron Letters. 36. 9341-9344 (1995)

    • Related Report
      1995 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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