• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Elucidation of the structural mechanisms of the affinity maturation in the immune response of anti-NP antibodies.

Research Project

Project/Area Number 07407062
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Physical pharmacy
Research InstitutionThe University of Tokyo

Principal Investigator

TAKAHASHI Hideo (1996-1997)  The University of Tokyo Graduate School of Pharmaceutical Sciences, Assistant Professor, 大学院・薬学系研究科, 助手 (60265717)

嶋田 一夫 (1995)  東京大学, 薬学部, 教授 (70196476)

Co-Investigator(Kenkyū-buntansha) NISHIMURA Chiaki  The University of Tokyo Graduate School of Pharmaceutical Sciences, Assistant Pr, 大学院・薬学系研究科, 助手 (70218197)
KATO Koichi  The University of Tokyo Graduate School of Pharmaceutical Sciences, Lecturer, 大学院・薬学系研究科, 講師 (20211849)
Project Period (FY) 1995 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥39,600,000 (Direct Cost: ¥39,600,000)
Fiscal Year 1997: ¥8,300,000 (Direct Cost: ¥8,300,000)
Fiscal Year 1996: ¥10,800,000 (Direct Cost: ¥10,800,000)
Fiscal Year 1995: ¥20,500,000 (Direct Cost: ¥20,500,000)
KeywordsANTIBODY / NMR / AFFINITY MATURATION / KINETIC ANALYSIS / 分子認識 / 相互作用 / 親和性
Research Abstract

It is known that the average affinity of serum generally increases with time after immunization. This phenomenon is called affinity maturation of immune response. It has been demonstrated that the variable region of the primary response anti-NP antibody, NIG9 carry none somatic mutations, and the secondary response anti-NP antibodies are somatically mutated and have a high affinity for NP.By gene analysis it has been shown that a Trp*Leu exchange at position 33 of the heavy chain is plays a crucial role in the affinity maturation of anti-NP antibodies.
On the basis of the data obtained from affinity measurements and kinetic analyzes of anti-NP antibodies, the secondary response antibodies, which have a Trp*Leu exchange at position 33 of the heavy chain, show higher rate constant for association (kon). We performed the NMR analyzes for elucidating the structural basis of this type of "kinetic maturation" by using Fab analogues selectively labeled with ^<15>N.The result of the NP-AmTEMPO binding experiments indicate that H1, H3, L1, and L3 loop form the antigen binding site of both the primary response antibody, Fab (N1G9), and the secondary response antibody, Fab (B2), and the construction of the antibody combining sites ofboth Fabs were closely similar. On the basis of the comparative analyzes of the hydrogen-deuterium exchange rates and transverse relaxation rates between Fab (N1G9) and Fab (B2), we are able to conclude that a conformational flexibility exists in the antigen binding site of Fab (B2) in the absence of the hapten, which leads hapten molecule easily accessible into antigen binding site. We therefore suggest that the conformational flexibility existing in the antigen binding site of the secondary response antibodies gives net increase in bimolecular hapten-antibody association rate constant. This type of kinetic maturation mechanism is thought to be one of the most efficient affinity maturation process.

Report

(4 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • 1995 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] H.Gouda: "NMR study of the interoction between the B doinain of Staphylucacol protein A and the Fc partits of immunoglolbalin G" Biochemistry. 37. 129-136 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Kobayashi: "Sporificities and rates of binding of anti-(6-4) photoproduot antibody frugmonts to synthetic thymine photo products" J.Biochemistry. 123. 182-188 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] S.Akashi: "Structural characterization of mouse monoclonal antibody 13-1 againot a porphyrin derirative:Identification of adisulfide bond in COR-H3 of MAb 13-1" Biochem.Biophys.Res.Commun.240. 566-572 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] J.Enokizono: "NMR analyore of the interaction between protein L and Ig lighe chains" J.Mol.Biol.270. 8-13 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.-A.Hsu: "Differential N-glycan putterns of secreted and tntracellular IgG produced in Trichoplusia ns cells" J.Biol.Chem. 272. 9052-9070 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] S.Akashi: "Characterigation of mouse switch vanant antibodies by matrix-assisted lager desonption ionization mass spectrometry and decrrospray ionzation wass spepectomeny" J.Am.Soc.Mass.Spectrom.7. 707-721 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] J.Y.Leen: "Purtffcation and characterization of N-β-alanyl-5-S-glutathanyl-3,4-dihyohoxyphey wlanmc a novel antibacterial substauce of Sarcophage peregrina (flesh fly)" J.Biol.Chem.271. 13573-13577 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] C.Nishimura: "Folding Topologies of hummen interleukin-6 and its matants as studred byNMR spectroscopy" Biochemistry. 35. 273-281 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Yamaguchi: "Proteolytic frogmentation with high specificity of mouse immunoglobulin G,Mopping of proteolytic clearage sites in the hinge region" J.Immunol.Methods. 181. 259-267 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Nakagawa: "Identification of neutral and sialyl N-linlced digosacoba ride stnrotures from humman serem glyooproteing using threc kinds of high-persormance lignid dnometogrophy" Anal.Biochem.226. 130-138 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] K.Kato: "A anodel for the complex betweenprotein G and an antibody Fc fragmont in solntin" Structure. 3. 79-85 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Gouda al.: "NMR study of the interaction between the B domain of Staphylococcal protein A and the Fc portion of immunoglobulin G" Biochemistry. 37. 129-136 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Kobayashi et al.: "Specificities and rates of binding of anti- (6-4) photoproduct antibody fragments to synthetic thymine photoproducts." J.Biochem.123. 182-188 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] S.Akashi et al.: "Structural characterization of mouse monoclonal antibody 13-1 against a porphyrin derivative : Indentification of a disulfide bond in CDR-H3 of Mab13-1." Biochem.Biophys.Res.Commun.240. 566-572 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] J.Enokizono et al.: "NMR analysis of the interaction between protein L and Ig light chains." J.Mol.Biol.270. 8-13 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.-A.Hsu et al.: "Differential N-glycan patterns of secreted and intracellular IgG produced in Trichoplusia ni cells." J.Biol.Chem.272. 9062-9070 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] S.Akashi et al.: "Characterization of mouse switch variant antibodies by matrix-assisted laser desorption ionization mass spectrometry and electrospray ionization mass spectrometry." J.Am.Soc.Mass Spectrom.7. 707-721 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] J.Y.Leem et al.: "Purification and characterization of N-bata-alanyl-5-S-glutathionyl-3,4-dihydroxyphenylalanine, a novel antibacterial substance of Sarcophaga peregrina (flesh fly)." J.Biol.Chem.271. 13573-13577 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] C.Nishimura et al.: "Folding topologies of human interleukin-6 and its mutants as studied by NMR spectroscopy." Biochemistry. 35. 273-281 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Yamaguchi et al.: "Proteolytic fragmentation with high specificity of mouse immunoglobulin G,Mapping of proteolytic cleavage sites in the hinge region." J.Immunol.Methods. 181. 259-267 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Nakagawa et al.: "Identification of neutral and sialyl N-linked oligosaccharide structures from human serum glycoproteins using three kinds of high-performance liquid chromatography." Anal.Biochem.226. 130-138 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] K.Kato et al.: "A model for the complex between protein G and an antibody Fc fragment in solution." Structure. 3. 79-85 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Hiroaki Gouda: "NMR Study of the Interaction between the B Domuin of Stuphylococal Protein A and the Fc Portion of Immunoglobulin G" Biochemistry. 37. 129-136 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Hiroaki Nakagawa,et al.: "Determination of Neutral and Sialyl N-Linked Oligosaccharide Structure from Human Serum Glycoproteins Using Three Kinds of HPLC" Analytical Biochemistry. 226. 130-138 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Nobuhisa Shimba et al.: "Comparative Thermodynamic Analysis of The Fv,Fab^* and Fab Fragments of Anti-Dansyl Mouse Monoclonal Antibody." FEBSLetters. 360. 1247-1250 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Koichi Kato et al.: "Model for the complex between protein Gand an antibody Fc fragmnentin solution." Structure. 3. 79-85 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Jae ll Kim et al.: "Three-dimensional Solution Structure of the Calcium Channel Antagonist w-Agatoxin IVA:Consensus Molecular Folding of Calcium Channel Blockers" J.Mol.Biol.250. 659-671 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Hidetaka Torigoe et al.: "The Affinity Maturation of Anti-4-Hydoroxy-3-Nitrophenylacetyl Mouse Monoclonal Antibody; A Calorimetric Study of the Antigen-Antibody interaction" J.Biol.Chem.270. 22218-22222 (1995)

    • Related Report
      1995 Annual Research Report

URL: 

Published: 1995-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi