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Population genetics analysis of blood group-related genes

Research Project

Project/Area Number 07454206
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 遺伝
Research InstitutionNational Institute of Genetics

Principal Investigator

SAITOU Naruya  National Institute of Genetics, Laboratory of Evolution of Genetics, Associate Professor, 集団遺伝研究系, 助教授 (30192587)

Co-Investigator(Kenkyū-buntansha) UEDA Shintaroh  University of Tokyo, Granduate School of Science, Associate Professor, 大学院・理学系, 助教授 (20143357)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥6,100,000 (Direct Cost: ¥6,100,000)
Fiscal Year 1996: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 1995: ¥4,400,000 (Direct Cost: ¥4,400,000)
Keywordsmolecular evolution / ABO blood group / chimpanzee / Network method / molecular phylogenetic analysis / sugar transferase
Research Abstract

There are three common alleles (A,B,and O) at the human ABO blood group locus. We compared nucleotide sequences of these alleles, and relatively large numbers of nucleotide differences were found among them. These differences correspond to the divergence time of at least a few million years, which is unusually large for a human allelic divergence under neutral evolution. We constructed phylogenetic networks of human and non-human primate ABO alleles, and at least three independent appearances of B alleles from the ancestral A form were observed. These results suggest that some kind of balancing selection may have been operating at the ABO locus. We also constructed phylogenetic trees of ABO and their evolutionarily related alpha-1,3-galactosyltransferase genes, and the divergence time between these two gene families was estimated to be roughly 400 million years ago.

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] Saitou N.and Yamamoto F.: "Evolution of primate ABO blood group genes and their homologous genes" Molecular Biology and Evolution. 14(印刷中). (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Sumiyama K.et al.: "Evolution of class III POU genes : amplification of characteristic amino acid residues by G+C pressure in mammals" Journal of Molecular Evolution. 43. 170-178 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ohtsuka H.et al.: "The presence/absence polymorphism and evolution of p53 pseudogene within the genus Mus" Molecular Phylogenetics and Evolution. 5. 548-556 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kitano T.et al.: "The phylogenetic relationship of the genus Oncorhynchus species inferred from nuclear and mitochondrial markers" Genes and Genetic Systems. 72(印刷中). (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ogasawara K.,Saitou N.,et al.: "Extensive polymorphism of ABO blood group gene : 1. Three major lineages of the alleles for the common ABO phenotypes." Human Genetics. 97. 777-783 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ogasawara K.,Saitou N.,et al.: "Molecular genetic analysis of the Variant phenotypes of ABO blood group system." Blood. 88. 2732-2737 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Saitou N.: "In Doolittle R. (ed,),Methods in Enzymology,Vol.266" Academic Press,Inc.,Orlando, 736 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Saitou N.: "Molecular Biology and Human Diversity" Cambridge University Press,Cambridge, 305 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 斎藤成也: "大和書房" 遺伝子は35億年の夢を見る一生命の誕生から人間の進化まで-, 238 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Oota H., Saitou N., Matsushita T., and Ueda S.: "A genetic study of 2,000-year-old human remains from Japan using mitochondrial DNA sequences." American Journal of Physical Anthropology. Vol.98. 133-145 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Saitou N.: "A genetic affinity analysis of human populations." Human Evolution. Vol.10, No.1. 17-33 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ogasawara, K., Bannai M., Saitou N., Yabe R., Nakata K., Takenaka M., Fujisawa K., Uchikawa M., Ishikawa Y., Juji T., and Tokunaga K.: "Extensive polymorphism of ABO blood group gene : 1. Three major lineages of the alleles for the common ABO phenotypes." Human Genetics. Vol.97. 777-783 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ogasawara K., Yabe R., Uchikawa M., Saitou N., Bannai M., Nakata K., Takenaka M., Fujisawa K., Juji T., and Tokunaga K.: "Molecular genetic analysis of the variant phenotypes of ABO blood group system." Blood. Vol.88, No.7. 2732-2737 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ohtsuka H., Oyanagi M., Mafune Y., Miyashita N., Shiroishi T., Moriwaki K., Kominami R., Saitou N.: "The presence/absence polymorphism and evolution of p53 pseudogene within the genus Mus." Molecular Phylogenetics and Evolution. Vol.5, No.3. 548-556 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Sumiyama K., Washio-Watanabe K., Saitou N., Hayakawa T., and Ueda S.: "Evolution of class III POU genes : amplification of characteristic amino acid residues by G+C pressure in mammals." Journal of Molecular Evolution. Vol.43, No.3. 170-178 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Saitou N., and Yamamoto F.: "Evolution of primate ABO blood group genes and their homologous genes." Molecular Biology and Evolution. Vol.14, No.4(in press). (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Saitou N.and Yamamoto F.: "Evolution of primate ABO blood group genes and their homologous genes" Molecular Biology and Evolution. 14・4(印刷中). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Ogasawara K.et al.: "Extensive polymorphism of ABO blood group gene : 1.Three major lineages of the alleles for the common ABO phenotypes" Human Genetics. 97. 777-783 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Ogasawara K.et al.: "Molecular genetic analysis of the variant phenotypes of ABO blood group system" Blood. 88・7. 2732-2737 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Sumiyama K.et al.: "Evolution of class III POU genes : amplification of characteristic amino acid residues by G+C pressure in mammals" Journal of Molecular Evolution. 43・3. 170-178 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Ohtsuka H.et al.: "The presence/absence polymorphism and evolution of p53 pseudogene within the genus Mus" Molecular Phylogenetics and Evolution. 5・3. 548-556 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Kitano T.et al.: "The phylogenetic relationship of the genus Oncorhynchus species inferred from nuclear and mitochondrial markers" Genes and Genetic Systems. 72(印刷中). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Saitou N.: "Doolittle R. (ed.),Methods in Enzymology,Vol.266" Academic Press,Inc.,Orlando, 736 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Saitou N.: "Molecular Biology and Human Diversity" Cambridge University Press,Cambridge, 305 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Saitou N.: "A genetic affinity analysis of human populations." Human Evolution. 10. 17-33 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Ishida N.et al.: "Mitochondrial DNA sequences of various species of the genus Equus with a special reference to the phylogenetic relationship between Przewalskii's wild horse and domestic horse" Journal of Molecular Evolution. 41. 180-188 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Ogasawara K.et al.: "Extensive polymorphism of ABO blood group gene:1.Three major lineages of the alleles for the common ABO phenotypes." Human Genetics. (印刷中). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Kurosaki K.et al.: "Sequence variation found in the flanking refion of a trimeric short tandem repeat at the PLA2 locus:its considerable effect on estimating alleles" Jpn.J.Legal Med.50. 1-5 (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Tanabe H.et al.: "Comparative gene mapping of orthologous immunoglobulin Cε1 gene (IGHE)in five species of non-human primates by fluorescence in situ hybridization" Cytogenet.Cell Genet.70. 239-242 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Tanabe H.et al.: "Molecular anatomy of human chromosome 9:comparative mapping of the immunoglobulin processed pseudogene Cε3 (IGHEP2)in primates" Cytogenet.Cell Genet.(印刷中). (1996)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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