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Hymidity-induced phase transition of nucleotide hydrates

Research Project

Project/Area Number 07454246
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 物性一般(含基礎論)
Research InstitutionKitasato University

Principal Investigator

SUGAWARA Yoko  Kitasato University, School of Science, Professor, 理学部, 教授 (10167455)

Co-Investigator(Kenkyū-buntansha) URABE Hisako  Tokyo Kasei Gakuin University Faculty of Home Economics Associate Prfessor, 家政学部, 助教授 (00193970)
Project Period (FY) 1995 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 1997: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 1996: ¥900,000 (Direct Cost: ¥900,000)
Keywordsnucleotide / humidity / first order phase transition / hydrate / crystal structure / intermolecular interaction / phonon / イノシン / 熱分析 / シチジン5'ーリン酸二ナトリウム / ヌクレオチド結晶 / 相転移
Research Abstract

Humidity-induced first order phase transition of nucleotides, which are repeating units of nucleic acid, was examined by X-ray analysis and Raman spectroscopy. Main results are as follows :
1.In crystals, nucleotides make a molecular layr. Between molecular layrs, there is a region which consists of crystal water molecules and cations.Number of crystal water molecules is a function of humidity. Increase or decrease of crystal water molecules accompanies change of inter layr distances and switching of hydrogen-bond networks and coordination scheme around sodium ions. Amartensite-like transformation was observed in the casa of Na_2CMP.
2.Diffused scattering along rows of the reciprocal lattice normal to the molecular plane was observed in the case of Na_2CMP.9H_2O.Static or dynamic fluctuation of number of crystal water molecules should cause layr disorder.
3.Intermolecular interactions within a molecular layr in a low hydrated state was found to be essential for reversible transition.
4.Rman spectra of a phonon region were measured. S-mode, whose character is common to that of the collective mode of nucleic acid, was conserved through the stepwise transition. The irreducible representation of S-mode was determined based on the polarized Raman spectra.
5.Calorimetric measureements revealed that the transition is classified into two groups. For the first group, the observed enthalpy change is in the same order to the latent heat of water. For the second group, the enthalpy change is about a half. Transformation of molecular layrs of the latter group is fairly small.

Report

(4 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • 1995 Annual Research Report
  • Research Products

    (8 results)

All Other

All Publications (8 results)

  • [Publications] H.Urabe, Y.Sugawara, and T.Kasuya: "Humidity-dependent structural transition of guanosine and Na2ATP crystals studied by low frequency Raman spectroscopy" Phys.Rev.B51(9). 5666-5672 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Sugawara et al.: "Crystal structure and humidity-induced phase transition of disodium salt of adenosine 5′-monophosphate" Mol.Cryst.Liq.Cryst.227. 255-258 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Urabe, Y.Sugawara, M.Ataka, and A.Rupprecht: "Low-frequency Raman spectra of lysozume crystals and oriented DNA films:Dynamics of crystal water" Biophys.J.74(in press). (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Urabe, Y.Sugawara, and T.Kasuya: "Humidity-dependent structural transition of guanosine and Na_2ATP crystals studied by low frequency Raman spectroscopy" Phys.Rev.B51 (9). 5666-5672 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Sugawara, H.Urabe, K.Kobayashi, Y.Iimura, and H.Iwasaki: "Crystal structure and humidity-induced phase transition of disodium salt of adenosine 5'-monophosphate" Mol.Cryst.Liq.Cryst.227. 255-258 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Urabe, Y.Sugawara, M.Ataka, and A.Rupprecht: "Low-frequency Raman spectra of lysozyme crystals and oriented DNA films-Dynamics of crystal water-" Biophys.J.74 (in press). (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Urabe,Y.Sugawara,M.Ataka,A.Rupprecht: "Low-frequency Raman spectra of lysozume crystals and oriented DNA films:Dynamics of crystal water" Biophys.J.74(in press). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Yoko Sugawara: "Crystal structure and humidity-induced phase transition of disodium salt of adenosine 5'-monophosphate" Mol.Cryst.Liq.Cryst.(印刷中). (1996)

    • Related Report
      1995 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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