• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Development and Utilization of Biosenser by Means of Genetic Marker of Harmful and Noxious Microalgae

Research Project

Project/Area Number 07456096
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Fisheries chemistry
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

UCHIDA Aritsune  Kyoto Univ., Graduate School of Agriculture, Professor, 農学研究科, 教授 (50027190)

Co-Investigator(Kenkyū-buntansha) HIROISHI Shingo  Fukui Pref.Univ.Facul.Bioresource, Professor, 生物資源学部, 教授 (00114190)
YOSHINAGA Ikuo  Kyoto Univ., Graduate School of Agriculture, Instructor, 農学研究科, 助手 (40230776)
SAKO Yoshihiko  Kyoto Univ., Graduate School of Agriculture, Asoc.Professor, 農学研究科, 助教授 (60153970)
石田 裕三郎  京都大学, 農学部, 教授 (20026488)
Project Period (FY) 1995 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥7,100,000 (Direct Cost: ¥7,100,000)
Fiscal Year 1997: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 1996: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1995: ¥4,100,000 (Direct Cost: ¥4,100,000)
Keywordsbiosensor / genetic informations / monoclonal antibody / 18SrDNA / 5.8SrDNA / Alexandrium tamarense / Gymnodinium mikimotoi / Flow cytometry / Gymnodiniummikimotoi / Chattonella
Research Abstract

Harmful and noxious microalgae in costal weaters and cause serious problems in publich health and fisheries. The morphological taxonomy of these microalgae, however, remains controversial because of the similarity and changeability of morphological features. Accordingly, a objective and precise method for identification is really reqiured. In this study we established the base of monitoring of these noxious species by flow cytometry using a monoclonal antibody and DNA probes. The results obtained are as follows ;
# We enumerated the microorganisms which killed the noxious red tide phytoplankton Heterosigma akashiwo (raphidophyceae) and Gymnodinium mikimotoi, (dinophyceae) haduring their blooms which occurred in Hiroshima Bay and Uranouchi Bay or Tanabe Bay, Osaka Bay'Japan, in 1995,1996 and 1997 using the MPN method. At every sampling site in these years, the rapid increase of the algicidal microorganisms in the seawater fractions less than 0.8mum was observed at the termination period of the blooms.
# We cloned and sequenced 5.8SrDNA and ITS1 / ITS2 regions of several strains of Alexandrium spp. In this experiments we it became clear that the nucleotide sequences of 3'-region of ITS1 were similar in the intratypes but not in entertypes. So, it is possible to discriminate Alexandrium tamarense and A.catenella by means of PCR methods with specific primers.
# The nucleotides sequence of 18SrDNA of G.mikimotoi had 97% abd 94% similarity against Prorocentrum micans and Symbiodinium sp., respectively.
# We developed a new DNA probe which is very specific for G.mikimotoi.
# The G.mikimotoi cells labeled with the specific DNA brobe were easily discriminate from other microalgae by means of flowcytomete.

Report

(4 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • 1995 Annual Research Report
  • Research Products

    (43 results)

All Other

All Publications (43 results)

  • [Publications] I.Yoshinaga et al.: "Analysis of algicidal ranges of thebacteria killing the marine dinoflagellate Gymnodinium mikimotoi isolted from Tanabe Bay,Wakayama Pref.,Japan" Fisheries Science. 63. 94-98 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] 左子 芳彦: "モノクローナル抗体およびリボソーマルRNA遺伝子による有毒微細藻の分子識別" 海洋. 29. 725-7312 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] M.Adachi et al.: "Analysis of Gymnodinium catenatum Dinophyceae using sequences of the 5.8SrDNA-ITS regions and random amplified polymorphic DNA" Fisheries Science. 63. 701-731 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Yoshikawa et al.: "Molecular cloning and nucleotide sequence analysis of the gene coding for chloroplast-type ferredoxin from the dinoflagellates Peridinium bipes and Alexandrium tamarense." Fisheries Science. 63. 692-700 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] 吉永 郁生: "赤潮の動態に関る従属栄養細菌の分子生態学的研究" 日本水産学会誌. 63. 502-505 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] M.Shin et al.: "Phylogenetic analysis by 16SrRNA gene seqauncing of obligate oligotrophs isolated from the Northern Basin of Lake Biwa (mesotrophic lake)." Microbes and Environments. 12. 27-36 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Sako et al.: "Phylogenetic relationship of ciguatera-causing dinoflagellate Gambierdisucus toxicus with 18S ribosomal DNA sequence comparison" Harmful and Toxic Algal Blooms. 7. 443-446 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Sako et al.: "Detection of the toxic dinoflagellates Alexandrium species by flow cytometry using a monoclonal antibody" Harmful and Toxic Algal Blooms. 7. 463-466 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Yoshida et al.: "Purification and properties on paralytic shellfish poisoningtoxins sulfotransferase from toxic dinoflagellate Gymnodinium catenatum" Harmful and Toxic Algal Blooms. 7. 499-502 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] K.Nakanishi et al.: "Detection of the red tide-causing plankton Alexandrium affine by a piezo electric immunosensor using a novel method of immobilizing antibodies" Analytical Letters. 29. 1247-1258 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] M.Adachi et al.: "Identification of the toxic dinoflagellates Alexandrium catenella and A.tamarense (Dinophyceae) using DNA probes and whole-cell hybridization" J.Phycol.32. 1049-1052 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Ishida et al.: "Algal Blooms,and Toxins" Progress in Microbial Ecology, 568 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Sako et al.: "Phylogenetic relationship of ciguatera-causing dino flagellate Gambierdisucus toxicus with 18S ribosomal DNA sequence comparison" Harmful and Toxic Algal Blooms. 7. 443-446 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Sako et al.: "Detection of the toxic dinoflagellates Alexandrium species by flow cytometry using a monoclonal antibody" Harmful and Toxic Algal Blooms. 7. 463-466 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Yoshida et al.: "Purification and properties on paralytic ahellfish poisoningtoxins sulfotransferase from toxic dinoflagellate Gymnodinium catenatum" Harmful and Toxic Algal Blooms. 7. 499-502 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] K.Nakanishi et al.: "Detection of the red tide-causing plankton Alexandrium affine by a piezoelectric immunosensor using a novel method of immobilizing antibodies." Analytical Letters. 29-(8). 1247-1258 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] M.Adachi et al.: "Identification of the toxic dinoflagellates Alexandrium catenella and A.tamarense (Dinophyceae) using DNA probes and whole-cell hybridization" J.Phycol. 32. 1049-1052 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] I.Yoshigana et al: "Analysis of algicidal ranges of the bacteria killing the marine dinoflagellate Gymnodinium mikimotoi isolated from Tanabe Bay, Wakayama Pref.Japan" Fisheries Sciece. 63. 94-98 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Yoshikawa et al: "Molecular cloning and nucleotide squence analysis of the gene coding for chloroplast-type ferredoxin from the dinoflagellates Peridinium bipes and Alexandrium tamrense." Fiesheries Science. 63. 692-700 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] M.Shin et al: "Phylogenetic analysis by 16SrRNA gene sequencing of obligate oligotrophs isolated from the Northern Basin of Lake Biwa (mesotrophic lake)" Microbes and Environments. 12(2). 27-36 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Ishida et al: "Algala Blooms and Toxins" Progress in Microbial Ecology. (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] I.Yoshinaga et al.: "Analysis of algicidal ranges of thebacteria killing the marine dinoflagellate Gymnodiniummikimotoi isolted from Tanabe Bay,Wakayama Pref.,Japan" Fisherie Science. 63. 94-98 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 佐子芳彦: "モノクローナル抗体およびリボソーマルRNA遺伝子のよる有毒微細藻の分子識別" 海洋. 29. 725-731 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] M.Adachi et al.: "Analysis of Gymnodinium catenatum Dinophyceae using sequences of the 5.8S rDNA-ITS regions and randomamplified polymorphic DNA" Fisheries Science. 63・5. 701-731 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] T.Yoshikawa et al.: "Molecular cloning and nucleotide sequence analysis of the gene coding for chloroplast-type ferredoxin from the dinoflagellates Peridinium bipes and Alexandrium tamarense." Fisheries Science. 63・5. 692-700 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 吉永郁生: "赤潮の動態に関る従属栄養細菌の分子生態学的研究" 日本水産学会誌. 63・4. 502-505 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] M.Shinet al.: "Phylogenetic analysis by 16S rRNA gene seqauncing of obligate oligotrophs isolated from the Northern Basin of Lake Biwa(mesotrophic lake)." Microbes and Environments. 12・2. 27-36 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Y.Ishida et al.: "Algal Blooms,and Toxins" Progress in Microbial Ecology, 568 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] T.Yoshikawa et al.: "There are 4 introns in the gene coding the DNA-binding protein HCc of Crypthecodiniumcohnii (Dinophyceae)" Fisheries Science. 62・2. 204-209 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] C.Riquelme et al.: "Isolation of a native bacterial strain from the escallop Argopecten purpuratums with inhibitory effects against pathogenicvibrios." J.Shell fish Res.15・2. 369-374 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Y.Sako et al.: "Phylogenetic relationship of ciguatera-causing dinoflagellate Gambierdiscus toxicus with 18S ribosomal DNA sequence comparison." Harmful and Toxic Algal Blooms. 7. 443-446 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Y.Sako et al.: "Detection of the toxic dinoflagellates Alexandrium species by flow cytometry using a monoclonal antibody." Harmful and Toxic Algal Blooms. 7. 463-466 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] K.Nakanishi et al.: "Detection of the red tide-causing plankton Chattonella marina using a piezoelectric,immunosensor" Analytica Chimica Acta. 325. 73-80 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] K.Nakanishi et al.: "Detection of the red tide-causing plankton Alexandrium affine by a piezoelectric imunosensor using a novel method of immobilizing antibodies." Analytical Lett.29・8. 1247-1258 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] A.Uchida et al.: "Enviromental and Biological Chemistry of Dimethylsulfoniopropionate and Related Sulfonium Compounds" Plenum Press New York,364 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Vrieling, E. G. et al.: "Chattonella and Fibrocapsa(Raphidophyceae): First observation of, potentially harmful, red tide organisms in Dutch coastal waters." Netherlands Journal of Sea Research. 32. 183-191 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Nagasaki, K. et al.: "Virus-like particles in unicellular apochlorotic microorganisms in the coastal water of Japan." Fisheries Science. 61. 235-239 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Yamaguchi, M. et al.: "Arapid and precise technique for enumeration of resting cysts of Alexandrium spp. (Dinophyceae)in natural sediments." Phycolgia. 34. 207-214 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Imai, I. et al.: "Algicidal marine bacteria isolated from Northrm Hiroshima Bay, Japan." Fisheries Science. 61. 628-636 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Yoshinaga, I. et al.: "Distribution and fluctuation of bacteria inhibiting the growth of a marine redtide phytoplankton Gymnodiniummikimotoi in Tanabe Bay." Fisheries Science. 61. 780-786 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Yoshikawa, T. et: "There are 4 introns in the gene coding the DNA-bindingprotein HCcof Crypthecodiniumcohnii(Dinophyceae)" Fisheries Science. 62. 152-157 (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Sako, Y. et al.: "Harmful Marine Algal Blooms Proceedings of the Sixth International Conference on Toxic Marine Phytoplankton" Lavoisier Publishing Inc., 952 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Uchida, A. et al.: "Environmental and Biological Chemistry of Dimethylsulfoniopropionate and Related Sulfonium Compounds" Plenum Press New York, 364 (1996)

    • Related Report
      1995 Annual Research Report

URL: 

Published: 1995-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi