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CHARACTERIZATION OF UNSTABLE INTERMEDIATES OF HEME ENZYMES BY UTILIZING ENZYMES AND THEIR HYBRIDES

Research Project

Project/Area Number 07458147
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioorganic chemistry
Research InstitutionOKAZAKI NATIONAL RESEARCH INSTITUTES

Principal Investigator

WATANABE Yoshihito  OKAZAKI NATIONAL RESEARCH INSTITUTES,INSTITUTE FOR MOLECULAR SCIENCE,PROFESSOR, 分子科学研究所, 教授 (10201245)

Co-Investigator(Kenkyū-buntansha) SHIMADA Hideo  KEIO UNIVERSITY,SCHOOL OF MEDICINE ASSOCIATE PROFESSOR, 医学部, 助教授 (80095611)
OZAKI Shin-ichi  OKAZAKI NATIONAL RESEARCH INSTITUTES,INSTITUTE FOR MOLECULAR SCIENCE,RESEARCH AS, 分子科学研究所, 助手 (40280581)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥5,800,000 (Direct Cost: ¥5,800,000)
Fiscal Year 1996: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1995: ¥4,400,000 (Direct Cost: ¥4,400,000)
KeywordsPEROXIDASE / COMPOUND I / PEG-HRP / MYOGLOBIN / HEME / ヘム蛋白質 / ミューテーション / ハイブリッド
Research Abstract

Polyethylene glycolated horseradish peroxidase (PEG-HRP) can catalyze one- and two-electron oxidation reactions in organic solvents as well as in aqueous buffer. Even though the oxidation of guaiacol in benzene and chlorobenzene is five order of magnitude slower than in phosphate buffer, compound I and II are also involved in the catalytic cycle in organic media. Factor analysis and global fittings of rapid scan data set reveal that the formation of compound I of PEG-HRP in organic media consists of two steps : the first fast and the second slow process, and suggest the involvement of a H2O2-HRP complex in the catalytic cycle. The labile precursor of compound I is stabilized when PEG-HRP reacts with hydrogen peroxide in chlorobenzene at -20゚C.The absorption spectrum of the precursor does not exhibit the features of hyperporphyrin spectrum but has a normal Soret as previously observed in R38L HRP.More importantly, compound I of PEG-HRP can be maintained for more than an hour at -20゚C in chlorobenzene.
Comparison of the X-ray crystal structures of sperm whale myoglobin (Mb) and cytochrome c peroxidase (CcP) allows us to design Mb mutants to mimic the active site of peroxidase. We have found that relocating the distal histidine of Mb from position 64 to 43 increases peroxygenase activities with respect to those of peroxidase as well as wild type Mb. More importantly, a ferryl radical cation like species has been identified as the catalytic intermediate of the Mb mutant for the first time. The relevance of the alignment of distal histidine to the functions of hemoproteins is discussed.

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (36 results)

All Other

All Publications (36 results)

  • [Publications] T.Matsui 他: "Preparation and Reactions of myoglobin Mutants Bearing both proximal Cysteine Ligand and Hydrophobic Distal Cavity : Protein Models for the Active Site of P-450" Biochemistry. 35. 13118-13124 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.Ozaki 他: "Conversion of Myoglobin into a Highly Stereospecific Peroxygenase by the L29H/H64L Mutation" Journal of the American Chemical Society. 118. 9784-9785 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.Nagano 他: "Catalytic Roles of the Distal Site Asparagine-Histidine Couple in Peroxidases" Biochemistry. 35. 14251-14258 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 渡辺芳人, 松井敏高: "合成モデル及び人工変異酵素を用いたヘム酵素による酸素活性化機構の解明-人工ヘム酵素合成への第一歩" 有機合成化学協会誌. 54. 1045-1054 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.Ozaki 他: "Catalytic Intermediates of Polyethylene Glycolated Horseradish Peroxidase in Benzene" The Keio Journal of Medicine. 45. S68 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] M.Mukai 他: "Effects of Concerted Hydrogen Bonding of Distal Histidine on Active Site Structures of Horseradish Peroxidase ; Resonance Raman Studies With Asn-70 Mutants" Journal of the American Chemical Society. 118. 1758-1766 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.Ozaki 他: "Conversion of Myoglobin into a Peroxygenase : A Catalytic Intermediate of Sulfoxidation and Epoxidation by the F43H/H64L Mutant" Journal of the American Chemical Society. 118. 6666-6667 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Y.Watanabe: "Oxygenase and Model Systems" Kluwer Academic Publishers, 223-282 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Nagano, S., Tanaka, M., Watanabe, Y., Morishima, I.: ""Putative Hydrogen Bond Network in the Heme Distal Site of Horseradish Peroxidase."" Biochem.Biophys.Res.Commun.207. 417-423 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Machii, K., Watanabe, Y., Morishima, I.: ""Acylperoxo-Iron (III) Porphyrin Complexes : A New Entry of Potent Oxidants for the Alkene Epoxidation."" J.Am.Chem.Soc.117. 6691-6697 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ozawa, S., Sakamoto, E., Ichikawa, T., Watanabe, Y., Morishima, I.: ""Model Studies of Nitrosyl Intermediates in the Catalytic Cycle of Dissimilatory Nitrite Reductases."" Inorg.Chem.34. 6362-6370 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Matsui, T., Nagano, S., Ishimori, K., Watanabe, Y., Morishima, I.: ""Preparation and Reactions of Myoglobin Mutants Bearing both Proximal Cysteine Ligand and Hydrophobic Distal Cavity : Protein Models for the Active Site of P-450."" Biochemistry. 35. 13118-13124 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ozaki, S., Matsui, T., Watanabe, Y.: ""Conversion of Myoglobin into a Highly Stereospecific Peroxygenase by the L29H/H64L Mutation."" J.Am.Chem.Soc.118. 9784-9785 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Nagano, S., Tanaka, M., Ishimori, K., Watanabe, Y., Morishima, I.: ""Catalytic Roles of Distal Site Aspargine-Histidine Couple in Peroxidases."" Biochemistry. 35. 14251-14258 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Watanabe, Y., Matsui, T.: ""Molecular Mechanism of Oxygen Activation by Heme Enzymes."" J,Syn.Org.Chem.54. 1045-1054 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ozaki, S., Inada, Y., Watanabe, Y.: ""Catalytic Intermediates of Polyethylene Glycolated Horseradish Peroxidase in Benzene."" Keio J.Med.45. S68 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Watanabe, Y., Ozaki, S., Matsui, T.: ""Mechanism Based Molecular Design of Peroxygenases."" Keio J.Med.45. S24 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Mukai, M., Nagano, S., Tanaka, M., Ishimori, K., Morishima, I., Ogura, T., Watanabe, Y., Kitagawa, T.: ""Effects of Concerted Hydrogen Bonding of Distal Histidine on Active Site Structures of Horseradish Peroxidase ; Resonance Raman Studies with Asn-70 Mutants."" J.Am.Chem.Soc.119. 1758-1766 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ozaki, S., Matsui, T., Watanabe, T.: ""Conversion of Myoglobin into a Peroxygenase : A Catalytic Intermediate of Sulfoxidation and Epoxidation by the F43H/H64L Mutant."" J.Am.Chem.Soc.119. 6666-6667 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Matsui, T., Ozaki, S., Watanabe, T.: ""Roles of the Location of Distal Histidine in the Oxidation Activities of Myoglobin."" J.Inorg.Biochem.67. 86 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ozaki, S., Inada, Y., Watanabe, Y.: ""Catalytic Intermediates of Polyethylene Glycolated Horseradish Peroxidase in Organic Media."" J.Inorg.Biochem.67. 87 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Goto, Y., Wada, S., Watanabe, Y., Morishima, I.: ""Oxidation of Aldehydes by Ferric Peroxo Porphyrin Complexes."" J.Inorg.Biochem.67. 96 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Murakami, T., Watanabe, Y., Morishima, I.: ""New Oxidation Reaction of an Iron Porphyrin Complex Related to Heme Catabolism."" J.Inorg.Biochem.67. 97 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ogo, S., Nakamura, S., Chen, H., Isobe, K., Watanabe, Y., Fish, R.H.: ""A New Water Soluble NMR Shift Reagent Based on Molecular Recognition Principles : Non-Covalent pi-pi Interactions of Water Soluble Aromatic Guest Substrates with A Bioorganometallic Host, [Cp^<**>Rh (2'-deoxyadenosine) ]3 (OTf)3."" J.Inorg.Biochem.67. 296 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Wada, S., Iwase, M., Watanabe, Y., Jitsukawa, K., Masuda, H., Einaga, H.: ""Ligand Oxidation by Activation of Hydrogen Peroxide with Non-Heme Iron (III) Complex."" J.Inorg.Biochem.67. 324 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Matsui他: "Preparation and Reactions of myoglobin Mutants Bearing both proximal Cysteine Ligand and Hydrophobic Distal Cavity : Protein Models for the Active Site of P-450" Biochemistry. 35. 13118-13124 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] S.Ozaki他: "Convension of Myoglobin into a Highly Stereospecific Peroxygenase by the L29H/H64L Mutation" Journal of the American Chemical Society. 118. 9784-9785 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] S.Nagano他: "Catalytic Roles of the Distal Site Asparagine-Histidine Couple in Peroxidases" Biochemistry. 35. 14251-14258 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 渡辺芳人、松井敏高: "合成モデル及び人工変異酵素を用いたヘム酵素による酸素活性化機構の解明-人工ヘム酵素合成への第一歩" 有機合成化学協会誌. 54. 1045-1054 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] S.Ozaki他: "Catalytic Intermediates of Polyethylene Glycolated Horseradish Peroxidase in Benzene" The Keio Journal of Medicine. 45. S68 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Y.Watanabe他: "Mechanism Based Molecular Design of Peroxygenases" The Keio Journal of Medicine. 45. S24 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] M.Mukai他: "Effects of Concerted Hydrogen Bonding of Distal Histidine on Active Site Structures of Horseradish Peroxidase ; Resonance Raman Studies with Asn-70 Mutants (印刷中)" Journal of the American Chemical Society. 118. (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Y.Watanabe: "Oxygenase and Model Systems" Kluwer Academic Publishers, 223-282 (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] S.Nagano: "Putative Hydrogen Bond Network inthe Heme Distal Site of Horseradish Peroxidase" Biochemical and Biophysical Research Communications. 207. 417-423 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] K.Machii: "Acylperoxo-Iron (III) Porphyrin Complexes:A New Entry of Potent Oxidants for the Alkene Epoxidation" : Journal of the American Chemical Society. 117. 6691-6697 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] S.Ozawa: "Model Studies of Nitrosyl Intermediates in the Catalytic Cycle of Dissimilatory Nitrite Reductases" Inorganic Chemistry. 34. 6362-6370 (1995)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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