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Structure Formation Mechanism of Helix-Type Membrane Protein

Research Project

Project/Area Number 07458166
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionTokyo University of Agriculture and Technology

Principal Investigator

MITAKU Shigeki  Tokyo University of Agriculture and Technology Dapertment of Biotechnology Professor, 工学部, 教授 (10107542)

Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥4,800,000 (Direct Cost: ¥4,800,000)
Fiscal Year 1996: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 1995: ¥3,100,000 (Direct Cost: ¥3,100,000)
KeywordsMembrane protein / Molecular structure / Activation energy / Kinetics / Nonbonded interaction / Incomplete denaturation / Bacteriorhodopsin / Hydrogen bond / ヘリックス / 立体構造 / 構造予測 / 構造形成 / レセプタータンパク質 / タンパク質変性 / 変性キネティクス
Research Abstract

Three kinds of denaturation experiments were performed for a typical membrane protein, bacteriorhodopsin, in order to estimate the contribution of various factors to the structure formation of membrane proteins. The results were as follow : 1. Bacteriorhodopsin denatured by the addition of alcohols. In the alcohol denaturation, the tertiary structure was destroyed with the secondary structure remained intact. 2. Bacteriorhodopsin did not denature in pure hexane. However, the structure was destroyed by the addition of small amount of alcohol, indicating that the hydroxyl group is responsible for the alcohol denaturation of membrane proteins. 3. The activation energy of the thermal denaturation was estimated from the temperature dependence of the denaturation kinetic constant. The activation energy of about 40 kcal/mol corresponds to about ten hydrogen bonds in membrane. Tihs number is the half of possible hydrogen bonds between transmembrane helices. Consequently, the mechanism of the structural stability is due to the polar interactions such as hydrogen bonds and ion pairs between transmembrane helices.

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] Shigeki Mitaku: "Interaction Stabilizing Tertiary Structure of Bacteriorhodopsin Studied by Denaturation Experiments" Proteins : Structure,Function,aan Genetics. 22. 350-362 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Makiko Suwa: "A Continuum Theory for the Prediction of Lateral and Rotational Positioning of α-Helices in Membrane Proteins" Proteins : Structure,Function,and Genetics. 22. 363-377 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Hiroyasu Itoh: "Estimation of the Hydrophobicity in Microenviroments by Pyrene Fluorescence Measurements : n-β-Octylglucoside Micelles" The Journal of Physical Chemistry. 100. 9047-9053 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Akinori Etoh: "Light-Induced Denaturation of Bacteriorhodopsin Just Above Melting Point of Two-Dimensional Crystal" Journal of The Physical Society of Japan. (印刷中).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Akinori Etoh: "Ultrasonic Absorption Anomaly of Brain Tissue" Japanese Journal of Applied Physics. 33. 2874-2879 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Akinori Etoh: "Anomalous Ultrasonic Absorption of Liposome Suspensions in the Liquid Crystal Phase" Japanese Journal of Applied Physics. (印刷中).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 美宅成樹: "液体および溶液の音波物性(書表)" 超音波テクノ. 第7巻. 67-69 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 美宅成樹(日本物理学会誌編集委員会): "自然の複雑さと階層構造" 日本物理学会誌. 50. 253-254 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 美宅成樹: "階層構造なしに生物を理解することはできない" 日本物理学会誌. 50. 255-262 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 美宅成樹(訳): "Robert Turner and Peter Jezzard(著),“心"を観察する" パリティ. 10. 15-21 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 美宅成樹(訳): "James Purdy(著),等角放射線治療のためのX線照射装置" パリティ. 10. 95-96 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 美宅成樹(訳): "Wlad T.Sobol(著),らせん型コンピューター・トモグラフィー" パリティ. 10. 104-105 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 美宅成樹: "シリーズ・ニューバイオフィジックス (11) ヒューマンゲノム計画 第2章 4 膜タンパク質の分類" 共立出版(印刷中),

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 美宅成樹(訳): "Robert A.Day(著),はじめての科学英語論文" 丸善, 293 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Shigeki Mitaku: "Interaction Stabilizing Tertiary Structure of Bacteriorhodopsin Studied by Denaturation Experiments" Proteins : Structure, Function, and Genetics. 22. 350-362 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Makiko Suwa: "A Continuum Theory for the Prediction of Lateral and Rotational Positioning of alpha -Helices in Membrane Proteins" Proteins : Structure, Function, and Genetics. 22. 363-377 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Hiroyasu Itoh: "Estimation of the Hydrophobicity in Microenviroments by Pyrene Fluorescence Measurements : n- beta -Octylglucoside Micelles" The Journal of Physical Chemistry. 100. 9047-9053 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Akinori Etoh: "Light-Induced Denaturation of Bacteriorhodopsin Just Above Melting Point of Two-Dimensional Crystal" Journal of The Physical Society of Japan. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Akinori Etoh: "Ultrasonic Absorption Anomaly of Brain Tissue" Japanese Journal of Applied Physics. 33. 2874-2879 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Akinori Etoh: "Anomalous Ultrasonic Absorption of Liposome Suspensions in the Liquid Crystal Phase" Japanese Journal of Applied Physics. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Shigeki Mitaku: "Interaction Stabilizing Tertiary Structure of Bacteriorhodopsin Studied by Denaturation Experiments" Proteins : Structure,Function,and Genetics. 22. 350-362 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] Makiko Suwa: "A Continuum Theory for the Prediction of Lateral and Rotational Positioning of α-Helices in Membrane Proteins" Proteins : Structure,Function,and Genetics. 22. 363-377 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] Hiroyasu Itoh: "Estimation of the Hydrophobicity in Microenviroments by Pyrene Fluorescence Measurements : n-β-Octylglucoside Micelles" The Journal of Physical Chemistry. 100. 9047-9053 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Akinori Etoh: "Light-Induced Denaturation of Bacteriorhodopsin Just Above Melting Point of Two-Dimensional Crystal" Journal of The Physical Society of Japan. (印刷中).

    • Related Report
      1996 Annual Research Report
  • [Publications] Akinori Etoh: "Ultrasonic Absorption Anomaly of Brain Tissue" Japanese Journal of Applied Physics. 33. 2874-2879 (1994)

    • Related Report
      1996 Annual Research Report
  • [Publications] Akinori Etoh: "Anomalous Ultrasonic Absorption of Liposome Suspensions in the Liquid Crystal Phase" Japanese Journal of Applied Physics. (印刷中).

    • Related Report
      1996 Annual Research Report
  • [Publications] 美宅成樹: "シリーズ・ニューバイオフィジックス(11)ヒューマンゲノム計画 第2章 4 膜タンパク質の分類" 共立出版(印刷中),

    • Related Report
      1996 Annual Research Report
  • [Publications] 美宅成樹(訳): "Robert A.Day(著),はじめての科学英語論文" 丸善, 293 (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] S.Mitaku: "Interaction Stabilizing Tertiary Structure of Bacteriorhodopsin Studied by Denaturation Experiments" Proteins:Struct.Functl.and Gene.22. 350-362 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] M.Suwa: "A Continuum Theory for rhe Prediction of Latcral and Rotational Positioning of α-Heliccs in Membrane Proteins:Bacteriorhodopsin." Proteins:Struct.Functl.and Gene.22. 363-377 (1995)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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