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Developement of User-Friendly System of Theoretical Calculations for Organic Experimentalists

Research Project

Project/Area Number 07554029
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section試験
Research Field Organic chemistry
Research InstitutionMIE UNIVERSITY

Principal Investigator

TOMIOKA Hideo  Mie University, Faculty of Engineering, Professor, 工学部, 教授 (20024599)

Co-Investigator(Kenkyū-buntansha) YAMADA Tomozumi  Asahi Kasei Co.Ltd., Director, サイエンスソフト事業部, 取締役事業部長
KOSEKI Shiro  Mie University, Faculty of Education, Assistant Professor, 教育学部, 助教授 (80252328)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥9,100,000 (Direct Cost: ¥9,100,000)
Fiscal Year 1996: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 1995: ¥7,400,000 (Direct Cost: ¥7,400,000)
KeywordsMolecular Orbital Theoretical Calculations / Software / Interface / Menue / User-Friendly / Open-shell Organic Molecules / Radicals / Triplet Carbenes
Research Abstract

We have been developing a general system of theoretical calculations for organic experimentalists. We employed the quantum chemistry program code GAMESS (General atomic and molecular electronic structure system) and three-dimensional graphic code MOLMOLIS (Daikin Industrial Co.) in order to construct this system. Interface routines have been developed by ourselves between these codes. By using this system, one can theoretically calculate ground states of stable molecules as well as those of radical intermediates and electronically excited chemical species without learning computer systems and UNIX commands.
So far, we succeeded in constructing the first version of the interface routines and installing MOLMOLIS and GAMESS with these routines. The processes of theoretical calculations are using a graphic window of MOLMOLIS and a mouse are the followings : 1.Modeling a molecular structure. 2.Transforming the molecular structure into GAMESS input data. 3.Selecting methods of theoretical calculation and its purpose : MCSCF and CI methods, as well as RHF,UHF,ROHF,GVB,and MP2, can be used.Most of common basis sets and effective core potential (ECP) basis sets can be selected. Total energy, energy minimum geometry, transition-state geometry, normal modes (vibrational frequency analysis), can be obtained. The default and sample input files are also prepared. 4.Submitting a job of theoretical calculation only by pushing a button. The molecular data and the options are automatically sent to GAMESS.5.When the GAMESS job is finished, MOLMOLIS receives a signal from GAMESS.6.Reading a molecular (optimized) structure and its molecular orbitals obtained using GAMESS.More than one orbital can be drawn at a time. 7.Selecting graphic options in order to illustrate a better picture. Since there are still some difficulties in selecting methods of theoretical calculation by using MOLMOLIS,we will continue developing this system.

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (20 results)

All Other

All Publications (20 results)

  • [Publications] K.Furukawa: "An ESR and MO Study of Stable Triplet Diphenylmethylene with Perpendicular Conformations" Mol. Cryst. Liq. Cryst.271. 183-190 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.Koseki: "Main Group Effective Nuclear Charges for Spin-Orbit Calculations" J. Phys. Chem.99. 12764-12772 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] H.Tomioka: "Photochemistry of Phenyl Azides Bearing 2-Hydroxy and 2-Amino Groups Studied by Matrix-Isolated Spectroscopy : Generation and Characterization of Reactive o-Quinoid Compounds" Liebigs Ann.1971-1980 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] A.Toyota: "Energy Component Analysis of the Pseudo Jahn-Teller Effect in Bicyclic Nonalternant Hydrocarbons : The Pentalenoid and Heptalenoid Systems" J. Phys. Chem.100. 2100-2106 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] N.Matsunaga: "Relativistic Potential Energy Surfaces of XH_2 (X=C, Si, Ge, Sn, and Pb) Molecules : Coupling of ^1A^1 and ^3B_1 States" J. Chem. Phys.104. 7988-7996 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] A.Toyota: "Structural Properties of 3, 10-Diazadispiro [5.0.5.3] pentadeca-1, 4, 8, 11-tetraene and Its Congeners" J. Mol. Structure (THEOCHEM). (印刷中).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] K.Furukawa: "An ESR and MO Study of Stable Triplet Diphenylmethylene with Perpendicular Conformations" Mol.Cryst.Liq.Cryst.271. 183-190 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.Koseki: "Main Group Effective Nuclear Charges for Spin-Orbit Calculations" J.Phys.Chem.99. 12764-12772 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] H.Tomioka: "Photochemistry of Phenyl Azides Bearing 2-Hydroxy and 2-Amino Groups Studied by Matrix-Isolated Spectroscopy : Generation and Characterization of Reactive o-Quinoid Compounds" Liebigs Ann.1971-1980 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] A.Toyota: "Energy Component Analysis of the Pseudo Jahn-Teller Effect in Bicyclic Nonalternant Hydrocarbons : The Pentalenoid and Heptalenoid Systems" J.Phys.Chem.100. 2100-2106 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] N.Matsunaga: "Relativistic Potential Energy Surfaces of XH_2 (X=C,Si, Ge, Sn, and Pb) Molecules : Coupling of ^1A_1 and ^3B_1 States" J.Chem.Phys.104. 7988-7996 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] A.Toyota: "Structural Properties of 3,10-Diazadispiro [5.0.5.3] pentadeca-1,4,8,11-tetraene and Its Congeners" J.Mol.Structure (THEOCHEM). (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] K.Furukawa: "An ESR and MO Study of Stable Triplet Diphenylmethylene with Perpendicular Conformations" Mol.Cryst.Liq.Cryst.271. 183-190 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] H.Tomioka: "Photochemistry of Phenyl Azides Bearing 2-Hydroxy and 2-Amino Groups Studied by Matrix-Isolated Spectroscopy:Generation and Characterization of Reactive o-Quinoid Compounds" Liebigs Ann.1971-1980 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] S.Koseki: "Main Group Effective Nuclear Charges for Spin-Orbit Calculations" J.Phys.Chem.99. 12764-12772 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] A.Toyota: "Energy Component Analysis of the Pseudo Jahn-Teller Effect in Bicyclic Nonalternant Hydrocarbons:The Pentalenoid and Heptalenoid Systems" J.Phys.Chem.100. 2100-2106 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] N.Matsunaga: "Relativistic Potential Engrgy Surfaces of XH_2(X=C,Si,Ge,Sn,and Pb)Molecules:Coupling of ^1A_1 and ^3B_1 States" J.Chem.Phys.104. 7988-7996 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] A.Toyota: "Structural Properties of 3,10-Diazadispiro[5.0.5.3]pentadeca-1,4,8,11-tetraene and Its Congeners" J.Mol.Structure(THEOCHEM). (印刷中). (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] S.Koseki: "Main Group Effective Nuclear Charges for Spin-Orbit Calculations" J. Phys. Chem.99. 12764-12772 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] K.Furukawa: "An ESR and MO Study of Stable Triplet Dephenylmethylene with Perpendicular Conformations" Mol. Cryst. Liq. Cryst.271. 183-190 (1995)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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