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Screening for genes that respond to environmental stimulus by a real-time monitoring of gene expression by bioluminescence

Research Project

Project/Area Number 07554045
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section試験
Research Field 植物生理
Research InstitutionNagoya University

Principal Investigator

KONDO Takao  Nagoya University, Graduate School of Science, Professor, 大学院・理学研究科, 教授 (10124223)

Co-Investigator(Kenkyū-buntansha) ISHINO Yoshizumi  Institute for Biomolecular engineering Research Leader, 中央研究所, 主任研究員
KATO Akira  Hokkaido Agriculture Station Research Leader, 作物開発部, 研究室長
ISHIURA Masahiro  Nagoya University, Graduate School of Science, Associate Professor, 大学院・理学研究科, 助教授 (20132730)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥6,300,000 (Direct Cost: ¥6,300,000)
Fiscal Year 1996: ¥2,300,000 (Direct Cost: ¥2,300,000)
Fiscal Year 1995: ¥4,000,000 (Direct Cost: ¥4,000,000)
KeywordsBiological Clock / clock gene / cyanobacteria / circadian rhythm / luciferase / bioluminescence / mutant / environment / 遺伝子発現 / スクリーニング / リアルタイムモニター
Research Abstract

To expand a potential of luciferase gene as a reporter of gene expression and technology for screening by bioluminescence with a cooled-CCD camera for a various phenomena that living organisms show, we planed this research project. Luciferase reporter library of promoters in a genome of cyanobacteria Synechococcus sp.PCC 7942 contained DNA fragments that were too long for further analysis. Therefore, we re-constructed a genomic library with luciferase reporter gene. Average DNA fragment of new library was 600 bp and the library contained independent E.coil clone as much as to cover the genome of Synechococcus for five times. We screened for 100,000 Synechococcus transformants that were introduced with this DNA-lux constructs and obtained 800 bioluminescent clones. All of 800 clones displayd a circadian bioluminescence rhythms, that confirmed previous results that circadian clock of cyanobacteria controlled most of gene expressions.
Then, we treated the 800 clones with various environmen … More tal stimulus, such as high temperature, low temperature, alteration in light fluence rate, irradiation of monochromatic light including UV range and selected for clones that displayd unique response. Response of clones as monitored with bioluminescence was similar for most of clones but we found several clones of which response was exceptional. We will analyze the response of these selected clones in detail and analyze the promoters that respond to each stimulus.
We sequenced DNA fragments of 10 clones of which bioluminescence was tightly controlled by the circadian clock and search for homology of insert in the genome of Synechocystis (Kazusa DNA Research Institute). Six genes were identified as clock controlled genes and will analyze physiological significance of the control in relation to environmental responses of these genes. Homologous genes will also be search in higher plant to examined clock control and environmental response of these genes in plants.
In addition to luciferase reporter gene, we demonstrated that aequorin genes which was introduced into higher plant can report free Ca level in plants cells and found that Ca level was under control of the circadian clock and light conditions. Less

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] Kondo, T., et al, .: "Circadian rhythms in rapidly dividing cyanobacteria." Science. 275. 224-227 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Liu, Y., et al.: "Circadian expression of genes involved in the purine biosynthetic pathway of cyanobacterium Synechococcus sp. strain PCC 7942." Mol. Microbiol.20. 1071-1081. (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Tsinoremas, N. F., et al.: "A sigma factor that modifies the circadian expression of a subset of genes in cyanobacteria." EMBO. J.15. 2488-2495 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Liu, Y., et al.: "Bacterial luciferase as a reporter of circadian gene expression in cyanobacteria" J. Bacteriol.177. 2080-2086 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Liu, Y., et al.: "Circadian orchestration of gene expression in cyanobacteria." Genes and Development.9. 1469-1478 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Johnson, C. H., et al.: "Circadian oscillations of cytosolic and chloroplastic free calcium in plants." Science. 269. 1883-1887 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Liu, Y., N.F.Tsinoremas, C.H.Johnson, N.V.Lebedeva, S.S.Golden, M.Ishiura, and T.Kondo: "Circadian orchestration of gene expression in cyanobacteria" Genes and Development. 9. 1469-1478 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Aoki, S., T.Kondo and M.Ishiura: "Circadian rhythm of dnaK gene expression in cyanobacteria Synechocystis sp.PCC 6803." J.Bacteriol.177. 5606-5611 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Johnson, C.H., M.R.Knight, T.Kondo, P.Masson, J.Sedbrook, A.Haley and A.Trewavas: "Circadian oscillations of cytosolic and chloroplastic free calcium in plants." Science. 269. 1863-1865 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Liu, Y., N.F.Tsinoremas, S.S.Golden, T.Kondo, and C.H.Johnson: "Circadian expression of genes involved in the purine biosynthetic pathway of cyanobacterium Synechococcus sp.strain PCC 7942." Mol.Microbiol. 20. 1071-1081 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Tsinoremas, N.F., Ishiura M., Kondo, T., Andersson, C.R., Tanaka, K., Takahashi H., Johnson, C.H.and Susan S.Golden: "A sigma factor that modifies the circadian expression of a subset of genes in cyanobacteria." EMBO J.15. 2488-2495 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kondo, T., T.Mori, N.V.Lebedeva, S.Aoki, M.Ishiura and S.S.Golden: "Circadian rhythms in rapidly dividing cyanobacteria." Science. 275. 224-227 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Aoki, S., T.Kondo H.Wada and M.Ishiura: "Circadian rhythm of the cyanobacterium Synechocystis sp.PCC 6803 in the dark." J.Bacteriol.179. 5751-5755 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kutsuna S., T.Kondo, S.Aoki, M.Ishiura: "A Period-Extender Gene pex that Extends the Period of the Circadian Clock in the Cyanobacterium Synechococcus sp.Strain PCC 7942. J." Bacteriol. (in press). (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] C.H.Johnson, S.S.Golden, M.Ishiura, and T.Kondo: "Circadian clocks in prokaryotes." Molecular Microbiol. 21. 5-11 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kondo, T.Circadian Clock of Cyanobacteria.: "In Circadian organization and oscillatory coupling, Eds K.Honma and S.Honma" Hokkaido Univ.Press. 25-38 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.S.Golden, M.Ishiura, C.H.Johnson and T.Kondo: "Cyanobacterial Circadian Rhythms." Ann Rev.Plant Physiol. 48. 327-354 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kondo,T.,et al,.: "Circadian rhythms in rapidly dividing cyanobacteria." Science. 275. 224-227 (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Liu,Y.,et al.: "Circadian expression of genes involved in the purine biosynthetic pathway of cyanobacterium Synechococcus sp.strain PCC7942." Mol.Icrobiol.20. 1071-1081 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Tsinoremas,N.F.,et al.: "A sigma factor that modifies the circadian expression of a subset of genes in cyanobacteria." EMBO J.15. 2488-2495 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Liu,Y.,et al.: "Bacterial luciferase as a reporter of circadian gene expression in cyanobacteria" J.Bacteriol.177. 2080-2086 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] Liu,Y.,et al.: "Circadian orchestration of gene expression in cyanobacteria." Genes and Development. 9. 1469-1478 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] Johson,C.H.,et al.: "Circadian oscillations of cytosolic and chloroplastic free calcium in plants." Science. 269. 1883-1887 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] Liu,Y.et al.: "Bacterial luciferase as a reporter of circadian gene expression in cyanobacteria" J.Bacteriol.177. 2080-2086 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Liu,Y.et al.: "Circadian orchestration of gene expression in cyanobacteria." Genes and Development.9. 1469-1478 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Aoki,S.et al.: "Circadian rhythn of dnak gene expression in cyanobacteria Synechocystis sp.PCC 6803." J.Bacteriol.177. 5606-5611 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Johnson,C.H.et al.: "Circadian oscillation of cytosolic and chloroplastic free calcium in plants." Scinece. 269. 1883-1887 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Tsinoremas,N.F et.al.: "A sigma factor that modifies the circadian expression of a subset of genes in cyanobacteria." EMBOJ.(印刷中). (1996)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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