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Research and Development of New Enzymes Catalyzing C-C Bond formation By Use of Thermostable Enzymes.

Research Project

Project/Area Number 07555252
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section試験
Research Field 生物・生体工学
Research InstitutionTohoku University

Principal Investigator

KOYAMA Taketoshi  Tohoku University, Faculty of Engineering, Associate Professor, 工学部, 助教授 (20089808)

Co-Investigator(Kenkyū-buntansha) KOIKE Ayumi  Toyota Motor Corp., Division of the 1st.FP,Researcher, 第一FP部, 研究員
OGURA Kyozo  Tohoku University, lnst.for Chem. Reac.Sci., Professor, 反応化学研究所, 教授 (80006303)
NISHINO Takuzo  Tohoku University, Faculty of Engineering, Professor, 工学部, 教授 (90005827)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥6,600,000 (Direct Cost: ¥6,600,000)
Fiscal Year 1996: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1995: ¥4,600,000 (Direct Cost: ¥4,600,000)
Keywordsfarnesyl diphosphate / prenyltransferase / thermostable enzyme / polyprenyl diphosphate / isoprenoid chain elongation / isoprenoid biosynthesis / overexpression / prenyl diphosphate synthase. / ファルネシルニリン酸 / ポリプレニルニリン酸 / 合成酵素 / プレニル二リン酸 / ポリプレノール / 人口基質ホモログ
Research Abstract

1. In order to construct new enzymes catalyzing novel types of C-C bond formation that is useful for application to organic synthesis of many kinds of biologically active compounds, we introduced several kinds of mutations in the structural gene of the thermostable famesyl dihosphate (FPP) synthase of Bacillus stearothermophilus and obtained the following results : (1) Identification of binding sites for an ally lic substrate such as dimethylallyl-or gernyl diphosphate and for the homoally lic substrate, isopentenyl diphosphate. (2) Identification of critical amino acid residues that reside in the catalytic site(s)of this preny ltransferase. (3) Conversion of cataly tic function synthesizing C-15 prenyl diphosphate (famesyl diphsphate) to catalyze the synthesis of longer prenyl chain length up to C-25 (farnesyl geranyl diphosphate). (4) Construction of several kinds of catalytically active FPP synthases comprising heteromeric subunits that contain amino acid replacements in the catalytically important amino acid residues in the catalytic site. (5) Construction of several kinds of chimeric enzymes consisting half of the farnesyl diphosphate synthase subunit and half of the heptaprenyl diphosphate synthase of B.Stearmophilus.
2. Molecular cloning the genes encoding several kinds of bacterial preny ltransferases was carried out. The cloned preny ltransferase genes were : (1) Heptaprenyl diphosphate [(all-E)-C_<35>PP] synthase of B.stearothermophilus. (2) Hexaprenyl diphosphate [(all-E)-C_<30>PP] synthase of Micrococcus luteus B-P 26. (3) Decaprenyl diphosphate [(all-E)-C_<50>PP] synthase of paracoccus denitrificans and (4) Undecaprenyl diphosphate [(Z,E-mixed)-C_<55>PP] synthase of M.luteus B-P 26. Construction of each of these clone expression system which enables overproduction of the encoded preny ltransferase in Escherichia coli cells has also been carried out.

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (40 results)

All Other

All Publications (40 results)

  • [Publications] Koyama,Tanetoshi: "Significance of phe-220 and Gln-221 in the Catalytic Mechanism of Farnesl Diphosphate Synthase of Bacillus stearothermophilus" Biochem.Biophys.Res.Commun.212. 681-686 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Koike-Takeshita,Ayumi: "Molecular Cloning and Nucleotide Sequences of the Genes for Heptaprenyl Diphosphate Synthesis" J.Biol.Chem.270. 18396-18400 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Maki,Yuji: "Substrate Specificity of Farnesyl Diphosphate Synthase from Bacillus stearothermophilus" Bioorg.Med.Chem.Lett.5. 1605-1608 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Inoue,Hitoshi: "Properties of Farnesol Phosphokinase of Botryococcus braunii" Phytochemistry. 40. 377-381 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ohnuma,Shin-ichi: "Conversion from Farnesyl Diphosphate Synthase to Geranylgeranyl Diphosphate Synthase by Random Chemical Mutagenesis" J.Biol.Chem.271. 10087-10095 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Koyama,Tanetoshi: "Identification of Significant Residues in the Substrate Binding Site of Bacillus stearothermophilus Farnesyl Diphosphate Synthase" Biochemistry. 35. 9533-9538 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Koyama,Tanetoshi: "Isopentenyl Diphosphate Isomerase in Rubber Latex" Phytochemistry. 43. 769-772 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yuan-Wei,Zhang: "Two Cistrons of the gerCOperon of Bacillus subtilis Encode the Two Subunits of Heptaprenyl Diphosphate Synthase" J.Bacteriology. 179. 1417-1419 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Koike-Takeshita,Ayumi: "Identification of a Novel Gene Cluster Participating in Menaquinone (Vitamin K_2) Biosynthesis.Cloning and sequence Detemination of the 2-Heptapreny1-1,4-naphthoquinone Methyltransferase Gene of B.stearothermophilus" J.Biol.Chem.(in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 小倉 協三: "現代化学増刊28、新しい酵素研究法 イソプレノイド生合成酵素の分子機構" 東京化学同人, 57-69 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 古山 種俊: "新タンパク質応用工学 バイオサイエンスへの有機化学の寄与" フジテクノシステム, 743-753 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ogura,Kyozo: "Dynamic Aspects of Natural Products Chemistry" Kodansha Scientific, 1-23

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Koyama,Tanetoshi: "Comprehensive Natural Product Chemistry" Elsevier Science (in press),

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Koyama et al.: "Significance of Phe-220 and Gln-221 in the Catalytic Mechanism of Farnesyl Diphosphate Synthase of Bacillus stearothermophilus" Biochem. Biophys. Res. Commun. 212-2. 681-686 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] A.Koike-Takeshita et al.: "Molecular Cloning and Nucleotide Sequences of the Genes for Heptaprenyl Diphosphate Synthesis" J.Biol. Chem.270-31. 18396-18400 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Y.Maki et al: "Substrate Specificity of Farnesyl Diphosphate Synthase from Bacillus stearothermophilus" Bioorg. Med. Chem. Lett.5-15. 1605-1608 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] H.Inoue et al: "Properties of Farnesol Phosphokinase of Botryococcus" Phytochemistry. 40-2. 377-381 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.Ohnuma et al.: "Conversion from Farnesyl Diphosphate Synthase to Geranylgeranyl Diphosphate Synthase by Random Chemical Mutagenesis" J.Biol.Chem. 271-17. 10087-10095 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Koyama et al.: "Identification of Significant Residues in the Substrate Binding Site of Bacillus Stearothermophilus Farnesyl Diphosphate Synthase" Biochemistry. 35-29. 9533-9538 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Koyama, Tanetoshi et al.: "Isopentenyl Diphosphate Isomerase in Rubber Latex" Phytochemistry. 43-4. 769-772 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ogura, Kyozo et al.: "Mechanistic Enzymology and Molecular Genetics of Chain Elongation in Isoprenoid Biosynthesis" Dynamic Aspects of Natural Products Chemistry Kodansha Sientific. 1-23 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Koike-Takeshita, Ayumi et al.: "Identification of a Novel Gene Cluster Participating in Menaquinone (Vitamin K_2) Biosynthesis. Cloning and sequence Determination of the 2-Heptaprenyl 1-1,4-naphtho-quinone Methyltransferase Gene of B.Stearothemophilus" J.Biol. Chem.(in Prsee.).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yuan-Wei, Zhang et al.: "Two Cistrons of the gerC Operon of Bacillus subtilis Encode the Two Subunits of Heptaprenyl Diphosphate synthase" J.Bacteriology. 179-4. 1417-1419 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Koyama et al.: "Isomerase and Prenyltransferases" Comprehensive Natural Product Chemistry, Elsevier Science, Oxford. Vol.2, Chapter 4(in press.).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] K.Ogura et al.: "Enzymatic Mechanism of Chain Elongation in Isoprenoid Biosynthesis" Chem. Rev. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Ogura, Kyozo et al.: Polyprenyl Diphosphate Synthases, Subcellular Biochemistry Vol.28 Cholesterol : Its Functions and Metabolism in Biology and Medicine. Pleunm Publishing Company, (in press),

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Koyama, Tanetoshi: "Identification of Significant Residues in the Substrate Binding Site of Bacillus stearothermophilus Farnesyl Diphosphate Synthase" Biochemistry. 35. 9533-9538 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Ohnuma, Shin-ichi: "Conversion from Famesyl Diphosphate to Geranylgeranyl Diphosphate Synthase by Random Chemical Mutagenesis" J. Biol. Chem.271. 10087-10095 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Koyama, Tanetoshi: "Isopentenyl Diphosphate Isomerase in Rubber Latex" Phytochemistry. 43. 769-772 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yuan-Wei, Zhang: "Two Cistrons of the gerC Operon of Bacillus subtilis Eneode the Two Subunits of Heptaprenyl Diphosphate Synthase" J. Bacteriology. (in press.)

    • Related Report
      1996 Annual Research Report
  • [Publications] Koike-Takeshita, Ayumi: "Identification of a Novel Gene Cluster Participating in Menaquinone (Vitamin K_2) Biosynthesis. Cloning and sequence Determination of the 2-Heptaprenyl-1, 4-naphthoquinone Methyltransferase Gene of B. stearothemophilus" J. Biol. Chem.(in press.).

    • Related Report
      1996 Annual Research Report
  • [Publications] Koyama, Tanetoshi: "Comprehensive Natural Product Chemistry" Elsevier Science (in press.),

    • Related Report
      1996 Annual Research Report
  • [Publications] Ogura, Kyozo: "Dynamic Aspects of Natural Products Chemistry" Kodansha Scientific, 1-23 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Koyama, Tanetoshi: "Significance of Phe-220 and Gln-221 in the Catalytic Mechanism of Farnesyl Diphosphate Synthase of Bacillus stearothermophilus" Biochem. Biophys. Res. Commum.212. 681-686 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Koike-Takeshita, Ayumi: "Molecular Cloning and Nucleotide Sequences of the Genes for Two Essential Proteins Constituting a Novel Enzyme System for Heptaprenyl Diphosphate Synthesis" J.Biol. Chem.270. 18396-18400 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Maki, Yuji: "Substrate Specificity of Famesyl Diphosphate Synthase from Bacillus stearothermophilus" Bioorg. Med. Chem.Ltt.5. 1605-1608 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Inoue, Hitoshi: "Properties of Famesol Phosphokinase of Botryococcus braunii" Phytochemistry. 40. 377-381 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Ohnuma, Shin-ichi: "Conversion from Famesyl Diphosphate Synthase to Geranylgeranyl Diphosphate Synthase by Random Chemical Mutagenesis." J. Biol. Chem.(in press). 271 (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] 小倉,協三: "新しい酵素研究法6:イソプレノイド生合成酵素の分子機構" 東京化学同人(株), 13 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 古山,種俊: "新タンパク質応用工学 バイオサイエンスへの有機化学の寄与" フジテクノシステムズ(株), 11 (1996)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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