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Development of in situ PCR method and its application to histochemistry

Research Project

Project/Area Number 07557001
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section展開研究
Research Field General anatomy (including Histology/Embryology)
Research InstitutionShiga University of Medical Science

Principal Investigator

KIMURA Hiroshi  Shiga University of Medical Science, Molecular Neurobiology Research Center, Professor, 分子神経生物学研究センター, 教授 (40079736)

Co-Investigator(Kenkyū-buntansha) TOOYAMA Ikuo  Shiga University of Medical Science, Molecular Neurobiology Research Center, Ass, 分子神経生物学研究センター, 助教授 (20207533)
Project Period (FY) 1995 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥11,800,000 (Direct Cost: ¥11,800,000)
Fiscal Year 1997: ¥2,400,000 (Direct Cost: ¥2,400,000)
Fiscal Year 1996: ¥4,500,000 (Direct Cost: ¥4,500,000)
Fiscal Year 1995: ¥4,900,000 (Direct Cost: ¥4,900,000)
KeywordsmRNA / in situ hybrydization / PCR method / reverse transcription / cDNA / primers / histochemistry / image analysis / 核酸 / 組織固定 / 画像解核 / 細胞
Research Abstract

The aim of this resaerch project is to develop a technique for in situ detection of mRNA with high specificity and sensitivity, using the amplification of mRNA by the polymerase chain reaction (PCR) method. In the first step of this study, we were able to establish an optimal condition for in situ reverse transcription. Then we further tried to utilize the cRNA,produced by the in situ reverse transcription on tissue sections of the rat brain, as templates for PCR amplification. For this purpose, it is first required to determine the optimal reaction condition of PCR which allows us to amplify cRNAs with the highest efficacy. Namely, 1)the determination of the optimal in situ condition for PCR,2)the examination of efective biotinylation, either by the introduction of biotin into polymerase chain reaction or by the use of biotin-labeled primers, 3)the determination of optimal condition for the visualization of labelled PCR products, and 4)quantitative morphometric analysis using a computor-assisted image analysisincluding the development of a computor-software. Concerning the determination for 1)we were able to obtain generally satisfactory condition. However, the determined condition differed from the known condition for in vitro PCR,and we have been trying to find out the reason for the discrepancy. As to the experiment for 2), it was clear that the introduction of biotin in the process of in situ PCR method is far effective than to use biotin-labeled primers. It should be noted, however, the introduction of excess labelling by biotin gives poor efficacy in in situ hybrydization. This means the labeling ratio has a key in the successful achievement for the in situ hybrydization histochemistry. The remainders, 3)and 4), have been done with successful results. We will be able to publish the details of this project, when we can cope with occasionally non-reproducible results due to yet unknown reasons.

Report

(4 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • 1995 Annual Research Report
  • Research Products

    (31 results)

All Other

All Publications (31 results)

  • [Publications] Nakajima K: "Immunohistochemical demonstration of GABAB receptors in the rat gastrointestinal tract." Neurochem.Res.2. 211-215 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Hirouchi M: "Molecular biological approaches to the GABAB receptor." Pharmacol.Rev.Comm.8. 151 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kimura H: "Immunohistochemical demonstratio of GABAB receptors in the rat brain" Pharmacol.Rev.Comm.8. 167 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Ding WG: "Development of neuropeptide Y innervation in the liver." Microscopy Research and Technique. 39. 365-371 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Ding WG: "Neuropeptide Y and peptide YY immunoreactivities in the pancreas of various vertebrates." Peptides. 18. 1523-1529 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Terai K: "Immunohistochemical localization of GABA-immunoreactive structures in the nucleus tractus solitarii of the rat." Neuroscience. 82. 843-852 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Takahashi M,Yamada T,Tooyama I,Morro I,Kimura H,Yamamoto T,Okada H.: "Insulin receptor mRNA in the substantia nigra in Parkinson's disease." Neurosci.Lett.204. 201-204 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kitamura Y,Takahashi H,Matsuoka Y,Tooyama I,Kimura H,Nomura Y,Taniguch T: "In vivo induction of inducible nitric oxide synthase by microinjection with interferon-g and lipopolysaccharide in rat hippocampus." Glia. 18. 233-243 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Suzuki M,Kitano H,Kitanishi T,Yazawa Y,Kitajima K,Takeda T,Kimura H,Tooyama I: "Detection of natriuretic peptides (ANP-B) receptor mRNAs in rat inner ear." Neuroreport. 8. 439-443 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Tooyama I,Sasaki K,Oomura Y,Li AJ,Kimura H: "Effect of acidic fibroblast growth factor on basal forebrain cholinergic neurons in senescence accelerated mice." Exp.Gerontol.32. 171-179 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kitano H,Takeda T,Suzuki M,Kitanishi T,Yazawa Y,Kitajima K,Kimura H,Tooyama I: "Vasopressin and oxytocin receptor mRNAs are expressed in the rat inner ear." Neuroreport. 8. 2289-2292 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Takenaka H,Kishimoto S,Tooyama I,Kimura H,Yasuno H: "Protein expression of fibroblast growth factor receptor-1 in keratinocytes during wound healing in rat skin." J Invest Dermatol.109. 108-112 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kimura H,Yasuhara O,Tooyama I: "Recent advances in neuroscience for Alzheimer's disease." Adv.Legal.Med. 3. 280-283 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Aimi Y,Wakabayashi Y,Yasuhara O,Matsuo A,Kwok YN,McGeer PL,Kimura H: "Immunohistochemical localization of low-affinity nerve growth factor receptor in the enteric nervous system of adult rats." Histochem.J.29. 529-537 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kitamura Y,Furukawa M,Matsuoka Y,Tooyama I,Kimura H,Nomura Y,Taniguchi T: "In vitro and in vivo induction of heme oxygenase-1 in rat glial cells : Possible involvement of nitric oxide production from inducible nitric oxide synthase." Glia. 22. 138-148 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Suzuki M: "Detection of C-type natriuretic peptide (CNP) and atrial natriuretic peptide (ANP-B) receptor mRNAs in rat inner ear." Neuroreport. 8. 439-443 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kitano H: "Vasopressin and oxytocin receptor mRNAs are expressed in the rat inner ear." Neuroreport. 8. 2289-2292 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Matsuoka Y: "In vivo hypothermia-induced neuronal damage in dentate gyrus of rat hippocampus : changes in NMDA receptors and the effect of MK-801." Neurochem.Int.30. 533-542 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Matsuoka Y: "In vivo hypothermia-induced neuronal damage with an enhancement of neuronal nitric oxide synthase immunoreactivity in hippocampus." Exp.Neurol.146. 57-66 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Takenaka H: "Protein expression of fibroblast growth factor receptor-1 in keratinocyte during wound healing in rat skin." J.Invest.Dermatol.109. 108-112 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Aimi Y: "Immunohistochemical localization of low-affinity nerve growth factor receptor in the enteric nervous system of adult rats." Histochem.J.29. 365-371 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Renda T: "Recent Advances in Microscopy of Cells,Tissues and Organs." Motta P.M., 239-246 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Takahash,M: "Insulin receptor mRNA in the substemtia nigra in Parkinson´s disease" Neurosci.Lett.204. 201-204 (1966)

    • Related Report
      1996 Annual Research Report
  • [Publications] Li;A-J: "Fibroblast growth facton receptor-1 in the leteral hypothalamic area regalate food intake." Exp.Neurol.137. 318-323 (1966)

    • Related Report
      1996 Annual Research Report
  • [Publications] Terada,H: "Distribution of nitric oxide synthase-immunoreactive neurons in fetal rat brain at embryonic day 15 and day 19." J.Chem.Neuroanat.10. 273-278 (1966)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yasuhara O.et al.: "Pick's disease immunohistochemistry: new alterations and Alzheimer's disease comparisions." Acta Neuropathol.89. 322-330 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Nakayasu H.et al.: "Cerebral GABA_A and GABA_B receptors." Ann. NY Acad. Sci.757. 516-527 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Tooyama I,et al.: "Subcellular localization of low density lipoprotein receptor‐related protein(a2‐macroglubulin receptor)in human brain." Brain Res.691. 235-238 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Hamaguch A.et al.: "Demonstration of fibroblast growth factor receptor‐1 in human prostate by polymerase chain reaction and immunohistochemistry." Prostate. 27. 141-147 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Araki,M.et al.: "High potassium promotes differentiation of retinal neurons but does not favor and differentiation of rods." Brain Res.89. 103-114 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Matsuoka Y.et al.: "Neuroprotective effects of NBOX on hypoxia‐induced neuronal damage in rat hippocampus." Neuroreport. 6. 2205-2208 (1995)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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