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Study of Pneumocystis carinii : from Molecular Microbiology to Drug Discovery

Research Project

Project/Area Number 07557027
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section展開研究
Research Field Bacteriology (including Mycology)
Research InstitutionThe University of Tokyo

Principal Investigator

NAKAMURA Yoshikazu  The University of Tokyo Instiute of Medical Science, Associate Professor, 医科学研究所, 助教授 (40114590)

Co-Investigator(Kenkyū-buntansha) 伊藤 耕一  東京大学, 医科学研究所, 助手 (10262073)
江川 滉二  東京大学, 医科学研究所, 教授 (00012724)
Project Period (FY) 1995 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥21,000,000 (Direct Cost: ¥21,000,000)
Fiscal Year 1997: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1996: ¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 1995: ¥16,000,000 (Direct Cost: ¥16,000,000)
KeywordsAIDS / pneumonia / Pneumocystis carinii / antigenic variation / major surface glycoprotein / telomere / expression switch / subtilisin-like protease / 日和見感染 / 表面抗原糖蛋白質 / 多重遺伝子
Research Abstract

The major cell surface glycoprotein (MSG) of Pneumocystis carinii plays a crucial role in the host-parasite interaction. We have discovered that genes encoding MSGs are repeated, highly polymorphic, distributed among all of the 14-15 chromosomes, and are expressed from a unique expression site termed UCS,leading to antigenic variation to evade the host immune system. We have shown further that a UCS site is telomeric and that antigenic variation may be generated by site-specific or homologous recombination between the UCS site and multiple MSG repertoires. Telomeric fragments other than the UCS were cloned by screening with the telomere sequence. Non-UCS telomeric clones that were sequenced also contained MSG gene (s) regardless of having been screened with non-MSG probes. Frequent occurrences of these telomeric MSG clones indicate that they represent silent MSG repertoires localized in the telomere regions. The UCS contained the two transcription start sites. The promoter activity of UCS was examined using a UCS-lacZ (beta-galactosidase gene) fusion in the budding yeast Saccharomyces cerevisiae and the fission yeast Shizosaccharomyces pombe because P.carinii is phylogenically close to yeast. UCS allowed beta-galactosidase synthesis in S.pombe but not in S.cerevisiae. The transcript start sites determined by 5'RACE analysis are located slightly upstream of the two authentic start sites in P.carinii. The promoter activity of UCS itself is about one fifth of that of a widely used promoter of S.pombe, nmtl. Three other putative promoter sequences of P.carinii also expressed a reporter gene in S.pombe. These findings indicate that Shizosaccharomyces pombe is useful as a heterologous expression host for native Pneumocystis carinii genes.

Report

(4 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • 1995 Annual Research Report
  • Research Products

    (43 results)

All Other

All Publications (43 results)

  • [Publications] Mita, K., Morimyo, M., Ito, K., Sugano, K., Ebihara, K., Hongo, E., Higashi, T., Hirayama, Y., Nakamura, Y.: "Comprehensive cloning of Schizosaccharamyces pombe genes encoding translation elongation factors." Gene. 187. 259-266 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Ito, K., Nakamura.Y.: "Cloning and overexpression of polypeptide release factor 1 of Thermus thermophilus." Biochimie. 79. 287-292 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Nakamura, Y., Wada, M.: "Molecular pathobiology and antigenic variation of Pneumocystis carinii." Adv.Parasitol. 41. 63-107 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Wada, M., Nakamura, Y.: "Closing and overexpression of cell surface subtilisin-like proteases(SSP) of Pneumocystis carinii." J.Euk.microbiol.54. 54S (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Wada, M., Nakamura, Y.: "Heterologous expression of Pneumocystis carinii genes in fission yeast." J.Euk.Microbiol.44. 55S-56S (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Moffat, J.G, Pel, H.J., Ito, K., Nakamura, Y., Tate, W.P.: "Escherichia coli reease factor-3:resolving the paradox of a typical G protein structure and atypical guanine nucleotide effects on function" RNA. 4. 47-54 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Nakamura, Y.: "The major surface antigen of Pneumocystis carinii." FEMS Immun.Med.Microbiol.(In press). (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Nakamura, Y.: "Molecular microbiology of Pneumocystis carinii." Jpn J.Med.Mycol.(In press). (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Desgupta, S., Fernandez, L., Kameyama, L., Inada, T., Nakamura, Y., Pappas, A., Court, D: "Genetic uncoupling of the dsRNA-binding and RNA-cleavage activities of the Escherichia coli endoribonuclease RNaseIII-the effect of dsRNA binding on gene expression." Mol.Microbiol.(In press). (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Ito, K., Ebihara, K.Nakamura, Y.: "Dissection if tRNA mimicry element of protein release factor eRFl of fission yeast:eRF3 binding is not necessaryfor eRFl function and cell viability." RNA. (In press). (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Yasuoka, A., Oka, S., Komuro, K., Shimizu, H., Kitada, K., Nakamura, Y., Shibahara, S., Takeuchi, T., Kondo, S., Shimada, K., Kimura, S.: "Successful treatment of Pneumocystis carinii pneumonia in mice with benanomicin A (ME1451)" Antimicro.Agent.Chemother.39. 720-724 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Wada, M., Sunkin, S.M., Stringer, J.R., Nakamura, Y: "Antigenic variation by positional control of major-surface-glycoprotein gene expression in Pneumocystis carinii." J.Infect.Dis.171. 1563-1568 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Wada, M., Nakamura, Y.: "Unique telomeric expression site of major-surface-glycoprotein genes of Pneumocystis carinii." DNA Res.3. 55-64 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Wada, M., Nakamura, Y: "Antigenic variation by telomeric recombination of major-surface-glycoprotein genes of Pneumocystis carinii." J.Euk.Microbiol.43. 8S (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Nakamura, Y., Ito, K., Isaksson, L.A.: "Emerging understanding of translation termination (Minireview)." Cell. 87. 147-150 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Mita, K., Morimyo, M., Ito, K., Sugano, K., Ebihara, K., Hongo, E., Higashi, T., Hirayama, Y., Nakamura, Y.: "Comprehensive cloning of Schizosaccharamyces pombe genes encoding translation elongation factors." Gene. 187. 259-266 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Nakamura, Y., Wada, M.: "Molecular pathobiology and antigenic variation of Pneumocystis carinii." Adv.Parasitol.41. 63-107 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Wada, M., Nakamura, Y.: "Cloning and overexpression of cell surface subtilisin-like proteases (SSP) of Pneumocystis carinii." J.Euk.Microbiol.44. 54S (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Wada, M., Nakamura, Y.: "Heterologous expression of Pneumocystis carinii genes in fission yeast/" J.Euk.Microbiol.44. 54S-56S (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Nakamura, Y.: "The major surface antigen of Pneumocystis carinii." FEMS Immun.Med.Microbiol.(In Press). (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Nakamura, Y.: "Molecular microbiology of Pneumocystis carinii." Jpn.J.Med.Mycol.(In Press). (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Mita,K., Morimyo,M., Ito,K., Sugano,K., Ebihara,K., Hongo,E., Higashi,T., Hirayama,Y., Nakamura,Y.: "Comprehensive cloning of Schizosaccharamyces pombe genes encoding translation elongation factors." Gene. 187. 259-266 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ito,K., Nakamura.Y.: "Cloning and overexpression of polypeptide release factor l of Thermus thermophilus." Biochimie. 79. 287-292 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Nakamura,Y., Wada,M.: "Molecular pathobiology and antigenic variation of Pneumocystis carinii." Adv.Parasitol. 41. 63-107 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Wada,M., Nakamura,Y.: "Closing and overexpression of cell surface subtilisinlike proteases (SSP) of Pneumocystis carinii." J.Euk.microbiol. 54. 54S (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Wada,M., Nakamura,Y.: "Heterologous expression of Pneumocystis carinii genes in fission yeast." J.Euk.Microbiol.44. 55S-56S (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Moffat,J.G, Pel,H.J., Ito,K., Nakamura,Y., Tate,W.P.: "Escherichia coli release factor-3 : resolving the paradox of a typical G protein structure and atypical guanine nucleotide effects on function" RNA. 4. 47-54 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Nakamura,Y.: "The major surface antigen of Pneumocystis carinii." In PrFEMS Immun.Med.Microbiol.(In Press). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Nakamura,Y.: "Molecular microbiology of Pneumocystis carinii." Jpn J.Med.Mycol.(In Press). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Desgupta,S., Fernandez,L., Kameyama,L., Inada,T., Nakamura,Y., Pappas,A., Court,D: "Genetic uncoupling of the dsRNA-binding and RNA-cleavage activities of the Escherichia coli endoribonuclease RNaseIII-the effect of dsRNA binding on gene expression." Mol.Microbiol.(In Press). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ito,K., Ebihara,K., Nakamura,Y.: "Dissection of tRNA mimicry element of protein release factor eRFI of fission yeast : eRF3 binding is not necessary for eRFI function and cell viability." RNA. (In Press). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Nakamura,Y.,Ito,K.and Isaksson,L.A.: "Emerging understanding of translation termination (Minireview)." Cell. 87. 147-150 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Ito,K.,Ebihara,K.,Uno,M. and Nakamura,Y.: "Conserved motifs of prokaryotic and eukaryotic polypeptide release factors:tRNA-protein mimicry hypothesis." Proc.Natl.Acad.Sci.USA. 93. 5443-5448 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Matsumura,K.,Ito,K.,Kawazu,Y.,Mikuni,O.and Nakmura,Y.: "Suppression of temperature-sensitive defects of polypeptide release factors RF-1 and RF-2 by mutations or by an excess of RF-3 in Escherichiacoli." J.Mol.Biol.258. 588-599 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yanofsky,C.,Horn,V.and Nakamura,Y.: "Loss or overproduction of polypeptide releasefactor 3 influences expressionof the tryptophanase operon of Escherichia coli." J.Bacteriol.178. 3755-3762 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Nakamura,Y.: "Regulation of peptide chain termination." In:Posttranscriptional Control of Gene Expression.edited by Resnekov,O.& von Gabain,A.(Springer-Verlag,NY).73-81 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Inada,T.and Nakamura,Y.: "Autogenous control of the suhB gene expression of Escherichia coli." Biochimie. 78. 209-212 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yasuoka, A.: "Successful treatment of Pneumocystis carinii pneumonia in mice with benanomicin A(MEl451)" Antimicro. Agent. Chemother.39. 720-724 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Wada, M: "Antigenic variation by positional control of major-surface-blycoprotein gene expression in Pneumocystis carinii" J. Infect. Dis.171. 1563-1568 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Mori, A: "A transcription terminator signal necessary for plasmid ColIb-P9 replication" Mol. Microbiol.17. 291-301 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Kawazu, Y: "Comparative characterization of release factor RF-3 genes of Escherichia coli, Salmonella. typhimurium and Dichilobacter nodosus" J. Bacteriol.177. 5547-5553 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Matsumura, K: "Suppression of temperature-sesitive defects of polypeptide release factors RF-1 and RF-2 by mutations or by an excess of RF-3 in Escherichia coli" J. Mol. Biol.(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Ito, K: "Conserved motifs of prokaryotic and eukaryotic polypeptide release factors: tRNA-protein mimicry hypothesis" Proc. Nat1.Acad. Sci. USA. (in press). (1996)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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