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Establishment of a competitive PCR for N-myc amplification in neuroblastoma

Research Project

Project/Area Number 07671958
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 小児外科
Research InstitutionToho University

Principal Investigator

INOUE Akira  Toho Univ., Sch.Med., Assistant Professor, 医学部, 講師 (10151599)

Co-Investigator(Kenkyū-buntansha) WATANABE Kiyoshi  Toho Univ., Sch.Med., Assistant, 医学部, 助手 (80167113)
KANDA Naotoshi  Tokyo Univ.Agr.Tech., Fac.Agr., Professor, 農学部, 教授 (40075429)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥2,200,000 (Direct Cost: ¥2,200,000)
Fiscal Year 1996: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 1995: ¥1,700,000 (Direct Cost: ¥1,700,000)
Keywordsneuroblastoma / N-myc / gene amplification / PCR / competitive PCR / prognosis / N-myc遺伝子 / 小児固型腫瘍
Research Abstract

N-myc amplification correlates well with the poor prognosis of neuroblastoma. Although the detection of N-myc amplification in neuroblastoma is of great importance, Southern hybridization, being employed solely so far, has some disadvantages such as time consuming, the requirement of larger amount of DNA,and somewhat complicated procedure. In order to overcome the disadvantages, we planned to apply competitive PCR (cPCR) to the measurement of N-myc amplification. Although the standard polymerase chain reaction (PCR) is essentially unsuitable for the quantitative detection of a given template DNA,cPCR is an absolute determination of the dose of a given template DNA.In 1995, we established cPCR system for determining N-myc amplification by employing the competitor plasmid pZH2.
In 1996, we examined the availability of cPCR in the copy-number determination using the samples with small amounts. We tested the N-myc copy number in 6 neuroblastoma samples collected by needle biopsy and demonstrated the availability. Taken together, we concluded cPCR established in this study is a rapid, simple, and being applicable to small samples and can be an alternate method of Southern hybridization to determine N-myc copy number.

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (12 results)

All Other

All Publications (12 results)

  • [Publications] Kong,X-T.,et al.: "Genetic alterations of tumor suppressor gene DCC in neuroblastoma." European Journal of Cancer. (予定). (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Inoue,A.,et al.: "Extensive genetic heterogeneity in a neuroblastoma cell lire NB(TV)1" International Journal of Cancer. (予定). (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 井上玲.他: "Competitive PCRによるN-myc増幅の検索" 小児外科. 29. 11-19 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kong, X.-T., Choi, S.-H., Inoue, A., Takita, J., Yokota, J., Hanada, R., Yamamoto, K., Bessho, F., Yanagisawa, M., and Hayashi, Y.: "Genetic alterations of tumor suppressor gene DCC in neuroblastoma." European Journal of Cancer. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Inoue, A., Yokomori, K., Tanabe, H., Mizusawa, H., Sofuni, T., Hayashi, Y., Tsuchida, Y., and Shimatake, H.: "Extensive genetic heterogeneity in a neuroblastoma cell lines NB (TU) 1" International Journal of Cancer. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Inoue, A., Hasan, Z., Tsuchida, Y., and Shimatake, H.: "Detection of N-myc amplification in neuroblastoma by competitive polymerase chain reaction (cPCR)." Japanese Journal of Pediatric Surgery. 29. 11-19 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Inoue,A,et.al.: "Competitive polymerase chain reaction for the quantification of N-myc gene copy in neuro blastoma." Tumor Biology. 17. 262-270 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Kong,x-T.,et al: "Genetic alterations of tumor suppressor gene DCC in neuro blastoma" European Journal of Cancer. (予定). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Inoue,A,et.al.: "Extensive genetic heterogeneity in a nouro blastoma cell line NB (TV) 1." International Journal of Cancer. (予定). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] 井上玲,他: "Competitive PCRによるN-mycの増幅の検索" 小児外科. 29. 11-19 (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yoshiaki Tsuchida: "Genetic Clinical Markers of Human Neuroblastoma with Special Reference to N-myc Oncogene-Amplified or Not Amplifiad?-An Overview" Tumor Biology. 17. 65-74 (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Akira Inoue: "Competitive Polymerase Chain Reaction for the Quantification of N-myc Gene Copy Number in Neuroblastoma" Tumor Biology. (発表予定). (1996)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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