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De novo synthesis of a small globular protein SGP and its insertion into lipid bilay

Research Project

Project/Area Number 07680729
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionFukuoka University

Principal Investigator

LEE Sannamu  Faculty of Science, Fukuoka University, Assistant, 理学部, 助手 (40248472)

Co-Investigator(Kenkyū-buntansha) INOUE Tohru  Faculty of Science, Fukuoka University, Professor, 理学部, 教授 (50078599)
SUGIHARA Gohsuke  Faculty of Science, Fukuoka University, Professor, 理学部, 教授 (50090915)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥2,300,000 (Direct Cost: ¥2,300,000)
Fiscal Year 1996: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 1995: ¥1,700,000 (Direct Cost: ¥1,700,000)
Keywordsstructural biology / membrane protein / artificial protein / ion channel / biomembrane / molten globule / 分子生物学 / ペプチド合成 / 脂質蛋白質相互作用
Research Abstract

The question of how to design a water-soluble globular protein remains. We report here a making of a native-like and pore-forming small globular protein (SGP,69 amino acid residues). The protein was designed to have four helices : a Trp-containing short hydrophobic helix in a middle surrounded by three Tyr-containing long basic amphiphilic helices. Size exclusion chromatography and CD measurement indicated that in buffer solution SGP is monomeric with a 50% helical structure. SGP did not completely denature even at high temperature (90゚C) ard at relatively high Gu-Cl concentration that the denaturant concentration at the midpoint of transition is 5M.Dye-binding studies and fluorescence energy transfer experiments showed that SGP possesses a hydrophobic binding site and its Trp of central helix is present at relatively hydrophobic region and accepts the energy from Tyr (s) in other amphiphilic helices, indicating that SGP takes a stable globular-like structure in aqueous solution. From the depth dependent fluorescent studies using egg PC liposomes containing n-doxyl fatty acids and brominated phospholipid as quenchers, it was found that the hydrophobic central alpha-helix is able to enter spontaneously into the lipid bilayrs and the Trp in central alpha-helix is located at about the middle of the alkyl chain in the outer layr of the phospholipid bilayr. The peptide is also able to increase the membrane permeability with two modes of current (basal current and single ion channel) in planar phospholipid bilayrs, indicating that the spontaneous insertion of the protein into lipid bilayr (basal current) and then the formation of a uniform size of channel pore (14pS). SGP is useful as a basic and starting model to find good amino acid sequences that fold to a desired protein structure and to search translocation mechanisms from aqueous solution into lipid bilayrs.

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] Osamu Oishi(他6名): "Conformations and orientations of aromatic amino acid residues of tachypresin I in phospholipid membranes" Biochemistry. 36(印刷中). (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Sannamu Lee(他8名): "De nivo design,synthesis and characterization of a pore-forming small globular protein SGP and its insertion into lipid bilayers" Biochemistry. 36(印刷中). (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Taira Kiyota(他2名): "Design and synthesis of amphiphilic a-helical model peptides with systematically varied hydrophobic-hydrophilic balance and their interaction with lipid-and bio-membranes" Biochemistry. 35. 13196-13204 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Osamu Shibata(他3名): "Mixed monolayer propertres of tetradecanoic acid with n-perfluorocarboxylic acids with 10,12,14,16 and 18 carbon atoms" Jornal of Colloid and Interface Science. 184. 201-208 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yau-Ichi Araki(他5名): "New cationic surfactants derived from bile acids : synthesis and thermodynamic and biophysicochemical properties such a memnrane perturbation and protein solubilizing abilities″" Colloids and Surface B : Biointerface. 8. 81-92 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] N.G.Park, Y.Yamato, S.Lee, and G.Sugihara: "Interaction of mastoparan-B from venom of a hornet in Taiwan with phospholipid bilayrs and its antimicrobial activity" Biopolymers. 36. 793-801 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] A.Tani, S.Lee, O.Oishi, H.Aoyagi, and M.Ohno: "Interaction of fragments of bactenecin 7 with phospholipid bilayrs and their antimicrobial activity"

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] G.Sugihara, Y.Arakawa, K.Tanaka, S.Lee and Y.Moroi: "Micelle formation and counterion binding of dodecylammonium alkanesulfonates in water at different temperatures" J.Colloid Interface Sci.170. 399-406 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.Ando, M.Nishikawa, H.Nishikawa, H.Takiguchi, S.Lee and G.Sugihara: "Drastic reduction of antimicrobial activity by replacement of Orn residues with Lys in cyclized amphiphilic b-ctructural model peptides" Int. J.Peptide Protein Res.46. 97-105 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.Lee, H.Yoshitomi, M.Morikawa, S.Ando, T.Inoue, G.Sugihara: "Homooligopeptides composed of hydrophobic amino acid residues interact in a specific manner by taking a-helix or b-structure toward lipid bilayrs" Biopolymers. 36. 391-398 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T,Kiyota, S.Lee, and G.Sugihara: "Design and Synthesis of Amphiphilic a-Helical Model Peptides with Systematically Varied Hydrophobic-Hydrophilic Balance and Their Interaction with Lipid-and Bio-membranes" Biochemistry. 35. 13196-13204 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Y.-I.Araki, S.Lee, G.Sugihara, M.Furuichi, S.Yamashita, and F.Ohseto: "New Cationic Surfactant Derived from Bile Acides : Synthesis and Thermodynamic and Biophysicochemical Prioperties such as Membrane Perturbation and Protein Solubilizing Abilities" Colloids Surfaces B : Biointerfaces. 8. 81-92 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] O.Oishi, S.Yamashita, E.Nishimoto, S.Lee, G.Sugihara, & M.Ohno: "Conformations and orientations of aromatic amino acid residues of tachypresin I in phospholipid membranes"" Biochemistry. 36, (in press). (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] S.Lee, T.Kiyota, T.Kunitake, E.Matsumoto, S.Yamashita, K.Anzai & G.Sugihara: "De nivo design, synthesis and characterizationof a pore-forming small globular protein SGP and its insertion into lipid bilayrs" Biochemistry. 36, (in press). (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Osamu Oishi(他6名): "Conformations and orientations of aromatic amino acid residues of tachypresin I in phospholipid membranes" Biochemistry. 36(印刷中). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Sannamu Lee(他8名): "De nivo design,synthesis and characterizationof a pore-forming small globular protein SGP and its insertion into lipid bilayers" Biochemistry. 36(印刷中). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Taira Kiyota(他2名): "Design and synthesis of amphiphilic a-helical model peptides with systematically varied hydrophobic-hydrophilic balance and their interaction with lipid-and bio-membranes" Biochemistry. 35. 13196-13204 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Osamu Shibata(他3名): "Mixed monolayer properties ot tetradecanoic acid with n-perfluorocarboxylic acid with 10,12,14,16 and 18 carbon atoms" Jornal of Colloicl and Interface Science. 184. 201-208 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yau-Ichi Araki(他5名): "New cationic surfactants derived from bile acids : synthesis and thermodynamic and biophysicochemical properties such a memnrane perturbation and protein solubilizing abilities"" Colloids and Surfaces B : Biointerface. 8. 81-92 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 李相男 他6名: "Homooligopeptides composed of hydrophobic amino acid residues interact in a specific manner by taking a-helix or b-structure toward lipid bilavers" Biopolymers. 36. 391-398 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 李相男 他3名: "Interaction of mastoparan-B from venom of a hornet in Taiwan with phospholipid bilayers and its antimicrobial activity" Biopolymers. 36. 793-801 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 李相男 他4名: "Interaction of fragments of bactenecin 7 with phospholipid bilayers and their antimicrobial activity" Jornal of Biochemistry. 117. 560-565 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 李相男 他5名: "Drastic reduction of antimicrobial activity by replacement of Orn residues with Lys in cyclized amphiphilic b-structural model peptides" International Journcl of Reptide Protein Research. 46. 97-105 (1995)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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