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Analysis of an actin-related protein localized in nuclei

Research Project

Project/Area Number 08044188
Research Category

Grant-in-Aid for international Scientific Research

Allocation TypeSingle-year Grants
SectionJoint Research
Research Field 応用微生物学・応用生物化学
Research InstitutionTohoku University

Principal Investigator

HARATA Masahiko  Tohoku University, Facul.Agricul., Lecturer, 農学部, 助手 (70218642)

Co-Investigator(Kenkyū-buntansha) ヴィンタース ベルガー  ウィーン大学, ガン研究所, 準教授
スティルマン デビットJ  ユタ大学, 細胞ウイルス分子生物学, 準教授
クーパー ジョンA  ワシントン大学, 医学部, 準教授
WINTERSBERGER Ulrike  University of Vienna, Inst.Tumorbiol.Cencer Res., Associated Professor
COOPER John A.  Washington University School of Medicine, Associate Professor
STILLMAN David J.  University of Utah Health Science Center, Associated Professor
スティルマン デビッド  ユタ大学, 細胞ウイルス分子生物学, 準教授
クーパー ジョン A  ワシントン大学, 医学部, 準教授
ヴィンタースベルガー ウ  ウィーン大学, ガン研究所, 準教授
Project Period (FY) 1996 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 1997: ¥2,300,000 (Direct Cost: ¥2,300,000)
Fiscal Year 1996: ¥2,000,000 (Direct Cost: ¥2,000,000)
Keywordsactin-related protein / histone / chromatin / regulation of gene expression / budding yeast / nuclear protein / protein-protein interaction / temperature-sensitive mutant / 遺伝子発現
Research Abstract

Recently various actin-related proteins, which show moderate similarity to conventional actins, have been reported, suggesting that actin family is much more diverse than it had been thought. ACT3 in Saccharomyces cerevisiae codes an actin-related protein and is essential for viability. Act3p is an novel actin-family protein in terms of its nuclear localization. According to sequence comparison, the basal core structure of conventional actin may well be conserved in Act3p. On the other hand, Act3p contains two unique hydrophilic segments compared with other actin family proteins. One of the unique segments contains a putative nuclear-targeting signal. The other is abundant in charged amino acids and predicted to form a loop-like structure protruded from surface.
Little is known about function of Act3p in nucleus, however, we got some results suggesting that Act3p was associated with chromatin. For instance, Act3p is released from isolated nuclei by treatment with salt or by digestion of chromatin with DNaseI.In addition, it was shown that point-mutations of ACT3 cause epigenetic effects on both chromatin structure and transcription of some genes in yeast.
It was thought that the unique segments of Act3p would be involved in its distinct function from other actin-family Proteins and we tried to identify proteins which interact with the segments. In the course of the research, we perfbrmed far-western blotting with a labeled peptide containing one of the segments and two-hybrid analysis. As a result, it was shown that the peptide bound mainly to core histones in vitro. In addition, protein-complex (es) containing both Act3p and core histones was isolated from nuclear extract using histidine-tagged Act3p and an anti-Act3p antibody, suggesting that Act3p interacts with core histones in vivo.
These findings show that Act3p is involved in transcriptional regulation through the change and/or maintenance of chromatin structure.

Report

(3 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • Research Products

    (44 results)

All Other

All Publications (44 results)

  • [Publications] Kenji Shimada,et al.: "A nuclear matrix-associated high molecular weight nuclear antigen, HMNA, of chicken and marked decrease of its immunoreactivity during the progression of S-phase" J. Cell Sci.110. 3031-3041 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Viktoria Weber et al.: "Purification and nucleic-acid binding properties of a Saccharomyces cerevisiae protein involved in the control of ploidy" Eur. J. Biochem.249. 309-317 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Frank,P.et al.: "Yeast RNase H(35) is the counterpart of the mammalian RNase HI, and is evolutionarily related to prokaryotic RNase HI" FEBS Lett.421. 23-26 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Heidenreich,E. et al.: "Starvation for a specific amino acid induces high frequencies of rho-mutants in Saccharomyces cerevisiae" Curr. Genet.31. 408-413 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Davis,D.R. et al.: "Altered structure of the DNA duplex recognized by yeast transcription factor Reblp" Nucleic Acids Res.25. 668-674 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Macatee,T. et al.: "Global alterations in chromatin accesibility associated with loss of SIN4 function" Nucleic Acids Res.25. 1240-1247 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] McBride,H.J. et al.: "Long-range interactions at the HO promoter" Mol. Cell. Biol.17. 2669-2678 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kasten,M.M. et al.: "A large protein comples containing the yeast Sin3p and Rpd3p transcriptional regulators" Mol. Cell. Biol.17. 4852-4858 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kasten,M.M. et al.: "Identification of the Saccharomyces cerevisiae genes STB1-STB5 encoding Sin3p: binding protein" Mol. Gen. Genet.256. 376-386 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Hart,M.C. et al.: "Mapping of the mouse actin capping protein alpha subunit genes and pseudogenes" Genomics. 39. 264-270 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Hart,M.C. et al.: "Vertebrates have conserved capping protein alpha isoformes with specific expression patterns" Cell Motil Cytoskelton. 38. 120-132 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Schafer,D.A. et al.: "Rapid and efficient purification of actin from nonmuscle sources" Cell Motil Cytoskelton. 39. 166-171 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kenji Shimada, et al.: "A nuclear matrix-associated high molecular weight nuclear antigen, HMNA,of chicken and marked decrease of its immunoreactivity during the progression of S-phase" J.Cell Sci. 110. 3031-3041 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Viktoria Weber et al: "Purification and nucleic-acid binding properties of a Saccharomyces cerevisiae protein involved in the control of ploidy" Eur.J.Biochem.249. 309-317 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Frank, P.et al.: "Yeast RNase H (35) is the counterpart of the mammalian RNase HI,and is evolutionarily related to prokaryotic RNase HI" FEBS Lett.421. 23-26 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Heidenreich, E.et al.: "Starvation for a specific amino acid induces high frequencies of rhomutants in Saccharomyces cerevisiae" Curr.Genet. 31. 408-413 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Davis, D.R.et al.: "Altered structure of the DNA duplex recognized by yeast transcription factor Reblp" Nucleic Acids Res.25. 668-674 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Macatee, T.et al: "Global alterations in chromatin accesibility associated with loss of SIN4 function" Nucleic Acids Res.25. 1240-1247 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] McBride, H.J.et al.: "Long-range interactions at the HO promoter" Mol.Cell.Biol.17. 2669-2678 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kasten, M.M.et al.: "A large protein comples containing the yeast Sin3p and Rpd3p transcriptional regulators" Mol.Cell.Biol.17. 4852-4858 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kasten, M.M.et al: "Identification of the Saccharomyces cerevisiae genes STB1-STB5 encoding Sin3p binding protein" Mol.Gen.Genet.256. 376-386 (1977)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Hart, M.C.et al.: "Mapping of the mouse actin capping protein alpha subunit genes and pseudogenes" Genomics. 39. 264-270 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Hart, M.C.et al.: "Vertebrates have conserved capping protein alpha isoformes with specific expression patterns" Cell Motil Cytoskelton. 38. 120-132 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Schafer, D.A.et al.: "Rapid and efficient purification of actin from nonmuscle sources" Cell Motil Cytoskelton. 39. 166-171 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Kenji Shimada, et al.: "A nuclear matrix-associated high molecular weight nuclear antigen,HMNA,of chicken and marked decrease of its immunoreactivity during the progression of S-phase" J.Cell Sci.110. 3031-3041 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Viktoria Weber et al.: "Purification and nucleic-acid binding properties of a Saccharomyces cerevisiae protein involved in the control of ploidy" Eur.J.Biochem.249. 309-317 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Frank, P.et al.: "Yeats RNase H(35)is the counterpart of the mammalian RNase HI,and is evolutionarily related to prokaryotic RNase HI" FEBS Lett.421. 23-26 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Heidenreich, E.et al.: "Starvation for a specific amino acid induces high frequencies of rho-mutants in Saccharomyces cerevisiae" Curr.Genet.31. 408-413 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Davis, D.R.et al.: "Altered structure of the DNA duplex recognized by yeast transcription factor Reblp" Nucleic Acids Res.25. 668-674 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Macatee, T:et al.: "Global alterations in chromatin accesibility associated with loss of SIN4 function" Nucleic Acids Res.25. 1240-1247 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] McBride, H.J.et al.: "Long-range interactions at the HO promoter" Mol.Cell.Biol.17. 2669-2678 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kasten, M.M.et al.: "A large protein comples containing the yeast Sin3p and Rpd3p transcriptional regulators" Mol.Cell.Biol.17. 4852-4858 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kasten, M.M.et al.: "Identification of the Saccharomyces cerevisiae genes STB1-STB5 encoding Sin3p binding protein" Mol.Gen.Genet.256. 376-386 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Hart, M.C.et al.: "Mapping of the mouse actin capping protein alpha subunit genes and pseudogenes" Genomics. 39. 264-270 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Hart, M.C.et al.: "Vertebrates have conserved capping protein alpha isoformes with specific expression patterns" Cell Motil Cytoskelton. 38. 120-132 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Schafer, D.A.et al.: "Rapid and efficient purification of actin from nonmuscle sources" Cell Motil Cytoskelton. 39. 166-171 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Achafer,D.A.他: "Dynamics of capping protein and actin assemblyin vitro : Uncapping barbed ends by polyphosphoinositides" J. Cell Biol.135. 169-179 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Sizonenko,G.I.他: "Mutational analysis of capping protein function in Saccharomyces cerevisiae" Mol. Biol. Cell. 7. 1-5 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Hart,M.C.他: "Mapping of the mouse actin capping protein alpha subunit genes and pseudogenes" Genomics. (印刷中). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Hopmann,R.他: "Actin organization,bristle morphology,and viability are affected by actin capping protein mutations in Drosophila" J. Cell Biol.133. 1293-1305 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Waddle,J.A.他: "Movement of cortical actin patches in yeast" J. Cell Biol.132. 861-870 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Dohrmann,P.R.他: "Role of negative regulation in promoter specificity of the homologus transcriptional activators Ace2p and Swi5p" Mol. Cell. Biol.16. 1746-1758 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yu,W.他: "Identification of SLF1 as a new cooper homeostasis gene involved in copper sulfide mineralization in Saccharomyces cerevisiae" Mol. Cell. Biol.16. 2464-2472 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Jiang,Y.W.他: "Epigenetic effects on yeast transcription caused by mutations in an actin-related protein present in the nucleus" Genes Dev.10. 604-619 (1996)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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