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Molecular Mechanisms of Genomic Instability and DNA Repair

Research Project

Project/Area Number 08280103
Research Category

Grant-in-Aid for Scientific Research on Priority Areas (A)

Allocation TypeSingle-year Grants
Research InstitutionOsaka University

Principal Investigator

HANAOKA Fumio  Osaka Univ., IMCB, Professor, 細胞生体工学センター, 教授 (50012670)

Co-Investigator(Kenkyū-buntansha) MAKI Hisaji  Nara Inst. Sci. Tech., Professor, バイオ, 教授 (20199649)
SHINAGAWA Hideo  Osaka Univ., RIMD, Professor, 微生物病研究所, 教授 (40029799)
TANAKA Kiyoji  Osaka Univ., IMCB, Professor, 細胞生体工学センター, 教授 (80144450)
YANAGIDA Mitsuhiro  Kyoto Univ., Grad. Sch. Sci., Professor, 大学院・生命科学研究科, 教授 (80025428)
YASUI Akira  Tohoku Univ., IDAC, Professor, 加齢医学研究所, 教授 (60191110)
Project Period (FY) 1996 – 2000
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥208,900,000 (Direct Cost: ¥208,900,000)
Fiscal Year 2000: ¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 1999: ¥23,900,000 (Direct Cost: ¥23,900,000)
Fiscal Year 1998: ¥58,700,000 (Direct Cost: ¥58,700,000)
Fiscal Year 1997: ¥54,700,000 (Direct Cost: ¥54,700,000)
Fiscal Year 1996: ¥68,600,000 (Direct Cost: ¥68,600,000)
KeywordsDNA repair / Nucleotide excision repair / Recombination repair / Homologous recombination / Mutagenesis / Carcinogenesis / Genetic disease / 組換之修復 / 相同的組換之
Research Abstract

We have studied various DNA repair mechanisms and the consequence of their defects from molecular to organism level. We categorized our studies into the following three subjects.
1. Mechanisms of excision repair and molecular consequence of their defects.
2. Mechanisms of homologous recombination and recombination repair.
3. Molecular mechanisms of mutagenesis.
In order to support this research project effectively, the advisory committee has conducted the following activities.
1. We have financially supported a couple of research groups, when we found that it is better to support them with respect to the progress bf those research areas.
2. We have published research forums and had meetings with all the members in order to facilitate exchange of information.
3. We have financially supported related two workshops, which have been held annually. One is "Workshop on Genetic Recombination and Its Regulation", and the other is "Workshop on DNA Repair and Mutagenesis".
4. We have held advisory committee twice per year in order to evaluate the outcomes of the research groups and to obtain suggestions for future research direction.
5. We have supported researchers to attend international meetings. We have also invited foreign researchers to Japan in order to facilitate the exchange of information.
6. We have published at the final year a book, which describes research activities of all the members of this project including the list of related publications and copies of their representative paper.

Report

(6 results)
  • 2001 Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • 1997 Annual Research Report
  • 1996 Annual Research Report
  • Research Products

    (42 results)

All Other

All Publications (42 results)

  • [Publications] Sugasawa, K.: "HHR23B,a human Rad23 homolog,stimulates XPC protein in nucleotide excision repair in vitro"Mol.Cell.Biol.. 16. 4852-4861 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Masutani, C.: "Identification and characterization of XPC-binding domain of hHR23B"Mol.Cell.Biol.. 17. 6915-6923 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Masutani, C.: "Xeroderma pigmentosum variant(XP-V)correcting protein from HeLa cells has a thymine dimer by pass DNA polymerase activity"EMBO J.. 18. 3491-3501 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Masutani, C.: "The XPV(xeroderma pigmentosum variant)gene encodes human DNA polymerase η"Nature. 399. 700-704 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Masutani, C.: "Mechanisms of accurate translesion synthesis by human DNA polymerase η"EMBO J.. 19. 3100-3109 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Sugasawa, K.: "Multi-step recognition mechanism in the global genomic nucleotide excision repair"Genes Dev.. 15. 507-521 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Sugasawa, K., Masutani, C., Uchida, A., Maekawa, T., van der Spek, P. J., Bootsma, D., Hoeijmakers, J. H. J., and Hanaoka, F.: "HHR23B, a human Rad23 homolog, stimulates XPC protein in nucleotide excision repair in vitro."Mol. Cell. Biol.. 16(9). 4852-4861 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Masutani, C., Araki, M., Sugasawa, K., van der Spek, P. J., Yamada, A., Uchida, A., Maekawa, T., Bootsma, D., Hoeijmakers, J. H. J., and Hanaoka, F.: "Identification and characterization of XPC-binding domain of hHR23B."Mol. Cell. Biol.. 17(12). 6915-6923 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Masutani, C., Araki, M., Yamada, A., Kusumoto, R., Nogimori, T., Maekawa, T., Iwai, S., and Hanaoka, F.: "Xeroderma pigmentosum variant (XP-V) correcting protein from HeLa cells has a thymine dimer bypass DNA polymerase activity."EMBO J.. 18(12). 3491-3501 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Masutani, C., Kusumoto, R., Yamada, A., Dohmae, N., Yokoi, M., Yuasa, M., Araki, M., Iwai, S., Takio, K., and Hanaoka, F.: "The XPV(xeroderma pigmentosum variant) gene encodes human DNA polymerase η."Nature. 399(6737). 700-704 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Masutani, C., Kusumoto, R., Iwai, S., and Hanaoka, F.: "Mechanisms of accurate translesion synthesis by human DNA polymerase η."EMBO J.. 19(12). 3100-3109 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Sugasawa, K., Okamoto, T., Shimizu, Y., Masutani, C., Iwai, S., and Hanaoka, F.: "Multi-step recognition mechanism in the global genomic nucleotide excision repair."Genes Dev.. 15(5). 507-521 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Matsuda,T.: "Low fidelity DNA synthesis by human DNA polymeraseη"Nature. 404. 1011-1013 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Masuitani,C.: "Mechanisms of accurate translesion synthesis by human DNA polymerase η"EMBO J. 19. 3100-3109 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yamada,A.: "Complementation of defective translesion synthesis and ultraviolet light sensitivity in xeroderma pigmentosum variant cells by human and mouse DNA polymerase η"Nucl.Acids Res.. 28. 2473-2480 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yuasa,M.: "Genomic structure, chromosomal localization and identification of mutations in the xeroderma pigmentosum variant gene"Oncogene. 19. 4721-4728 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Tissier,A.: "Misinsertion and bypass of thymine-thymine dimers by human DNA polymerase L."EMBO J. 19. 5259-5266 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kannouche,P.: "Domain structure, localisation and function of DNA polymerase η, defective in xeroderma pigmentosum variant cells"Genes Dev.. 15. 158-172 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Masutani, C.: "The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase η"Nature. 399. 700-704 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Masutani, C.: "Xeroderma pigmentosum variant (XP-V) correcting protein from HeLa cells has a thymine dimer bypass DNA polymerase activity"EMBO J.. 18. 3491-3501 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Miyauchi-hashimoto, H.: "Ultraviolet radiation-induced suppression of natural killer cell activity is enhanced in xeroderma pigmentosum group A (XPA) model mice"J. Invest. Dermatol.. 112. 965-970 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Hishida, T.: "Role of Walker motif A of Ruv B protein in promoting branch migration of holiday junction"J. Biol. Chem.. 274. 25335-25342 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Fuji, S.: "DNA replication errors produced by the replicative apparatus of Escherichia coli"J. Mol. Biol.. 289. 835-850 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] yasuhira, S.: "Transcription dependence and the roles of two excision repair pathways for UV damage in fission yeast schizosaccaharomyces pombe"J. Biol. Chem.. 274. 26822-26827 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Sugasawa,K.: "Xeroderma pigmentosum group C protein complex is the initiator of global genome nudeotide axcision repair." Mol.Cell. 2. 223-232 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kai,M.: "A new Drosophila ultravidet light-dauaged DNA recognition endonucloase that selectively nicks a (6-4)photoproduct site." Biochim.Biophys.Acta. 1397. 180-188 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Carrier,F.: "Evidewe for distinct kiuase-mediated pathways in gadd gene responses." Biochem.Pharmacol.55. 853-861 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Takeuchi,S.: "Strand specificity and absewe of hot spots for p53 mutations in ultravidet B-induced skin tumors of XPA-deficient mice." Cancer Res.58. 641-646 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Ishioka,K.: "Abortive recombination in Escherichia colirur mutants blocks chromosome partitioning" Genes Cells. 3. 209-220 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Takao,M.: "Mitochondrial targeting of human DNA glycosylases for repair of oxidative DNA damage." Nucl.Acids Res.26. 2917-2922 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Masutani,C.et al.: "Identification and characterization of XPC-binding domain of hHR23B" Mol.Cell.Biol.17. 6915-6923 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Sugasawa,K.et al.: "Two human homologs of Rad23 are functionally interchangeable in complex formation and stimulation of XPC repair activity." Mol.Cell.Biol.17. 6924-6931 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Withers-Ward,E.S.et al.: "Human immunodeficiency virus type1 Vpr interacts with HHR23A,a cellular protein implicated in nucleotide excision DNA repair." J.Virol.71. 9732-9742 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Nocentini,S.et al.: "DNA damage recognition by XPA protein promotes afficient recruitement of TFIIH" J.Biol.Chem.272. 22991-22994 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Fukuoh,A.et al.: "ATP-dependent resolution of R-loop at the ColEl replication origin by Escherichia coli RecG protein a Holiday junction-specific helicase" EMBO J.16. 203-209 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Yonemasu,R.et al.: "Characterization of the alternative axcision repair pathway of UV-damaged DNA in Schizosaccharomyces pombe." Nud.Acids Res.25. 1553-1558 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ikehata,H.et al.: "Incubation at the nonpermissive tenyerature induces deficiencies in UV resistance and mutagenesis in mouse mutant cells expressing a tenperature-sensitive ubiquitin-activating anzyme El." Mol.Cell.Biol.17. 1484-1489 (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Fukuoh,A.et al.: "ATP-depandent resolution of R-loops at the ColEl replication origin by Escherichia coli RecG protein,a Holliday junction-spacific helicase." EMBO J.16. 203-209 (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Saijo,M.et al.: "Seguential binding of DNA repair proteins RPA and ERCCl to XPA in vitro." Nucl,Acids Res.24. 4719-4724 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Sugasawa,K.et al.: "HHR23B,a human Red23 homolog,stimulates XPC protoein in nucleotide excision rapair in vitro." Mol.Cell.Biol.16. 4852-4861 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] van der Spek,P,J,et al.: "XPC and human homologs of RAD23:intracellular localization and relationship to other nucleotide excision repair complexes." Nucl.Acids Res.24. 2551-2559 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Shinagawa,H.& Iwasaki,H.: "Processing the Holliday junction in homologous recombination" Treads Biochem.Sci.21. 107-111 (1996)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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