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Establishment of New Breeding Science by Biotechnology

Research Project

Project/Area Number 08306001
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Breeding science
Research InstitutionThe University of Tokyo

Principal Investigator

HIRAI Atsushi  Graduate School of Agricultural and Life Science, Professor, 大学院・農学生命科学研究科, 教授 (60023470)

Co-Investigator(Kenkyū-buntansha) NAGATO Yasuo  Graduate School of Agricultural and Life Sciences, Professor, 大学院・農学生命科学研究科, 教授 (10143413)
IKEHASHI Hiroshi  Kyoto Univ.Agric., Professor, 農学部, 教授 (50193222)
HATTORI Kazumi  Nagoya Univ.Agric., Professor, 農学部, 教授 (40023494)
MIKAMI Tetsuo  Hokkaido Univ.Agric., Professor, 農学部, 教授 (50133715)
SANO Yoshio  Hokkaido Univ.Agric., Professor, 農学部, 教授 (70109528)
岩田 伸夫  九州大学, 農学部, 教授 (50038204)
Project Period (FY) 1996 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥19,200,000 (Direct Cost: ¥19,200,000)
Fiscal Year 1998: ¥5,200,000 (Direct Cost: ¥5,200,000)
Fiscal Year 1997: ¥6,000,000 (Direct Cost: ¥6,000,000)
Fiscal Year 1996: ¥8,000,000 (Direct Cost: ¥8,000,000)
Keywordsbreeding Science / gene expression / mitochondria / ミトコンドリアゲノム / イネ / 発現 / 転移 / tRNA / 転写機構 / 花 / 突然変異
Research Abstract

Many findings for new breeding sciences were reported. One of the important findings was the stability of plant mitochondrial genome. Mitochondrial sequence that contains the chloroplast-derived trnH gene has been highly conserved in the region around one terminus of the junction between chloroplast-derived and mitochondrion-specific sequences in most of the gramineous plant analyzed. The results of RT-PCR, northern hybridization, in vitro capping and ribonuclease protection experiments show that the chloroplast-derived trnH gene is transcribed from a promoter that is located in the mitochondrion-specific sequence. Gene expression in this region seems to be correlated with the conservation of the sequence at the junction between chloroplast-derived fragment and the mitochondrion-specific sequence.
Thus, expression of chloroplast-derived tRNA genes is important for the stability of plant mitochondrial genome. Previous investigations located nine of the genes for rice tRNAs on chloroplast-derived sequences in mitochondrial DNA.We examined whether these genes were also transcribed in the rice mitochondria. Northern blot hybridization revealed that seven of these genes (trnC, trnF, trnH, trnM, trnN, trnS and trnW) are transcribed and are precisely processed to mature tRNAs. One of the other two genes (trnP) is transcribed but cannot be processed efficiently, and the other (trnR), which has 100% identity to the original plastid tRNA_<Arg> gene, is not transcribed in rice mitochondria. These results suggest that seven of the nine pt-derived tRNAs may be utilized for biosynthesis of protein in plant mitochondria, and support for the stability of plant mitochondrial genome.

Report

(4 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • 1996 Annual Research Report
  • Research Products

    (42 results)

All Other

All Publications (42 results)

  • [Publications] Kusaka,M.et al.: "Characterization of two rice genes for nuclear-encoded chloroplast ribosomal protein L12 and phylogenetic analysis of the acquisition of transit peptides" Theor.Appl.Genet.97. 110-115 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Arimura,S.et al.: "Genomic structures and the 5'-flanking regions of the nuclear genes for chloroplast ribosomal proteins L13 and L24 of rice(Oryza sativa L.)." Breed.Sci.48. 145-149 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Miyata,S.et al.: "Transcription of plastid-derived tRNA genes in rice mitochondria." Curr.Genet.34. 216-2〓 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Senda M.et al.: "Recombination events across the atpA-associated repeated sequences in the mitochondrial genomes of beets." Theor.Appl.Genet.96. 964-968 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] L.V.Dung et al.: "Dissection of a major QTL for photoperiod sensitivity in rice : Its association with a gene expressed in an age-dependent manner." Theor.Appl.Genet.97. 714-720 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Yamaguchi,J.et al.: "Characterization of β -amylase and its deficiency in various rice cultivars." Theor.Appl.Genet.(in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Nakazono, M., et al.: "Multiple initiation sites for transcription of a gene for subunit 1 of F1-ATPase (atp1) in rice mitochondria." Curr.Genet.29. 417-422 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Nakazono, M., et al.: "A chloroplast-derived sequence is utilized as a source of promoter sequences for the gene for subunit 9 of NADH dehydrogenase (nad9) in rice mitochondria." Mol.Gen.Genet.252. 371-378 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kadowaki, K., et al.: "Targeting presequence acquistion after mitochondrial gene transfer to the nucleus occurs by duplication of existing targeting signal." EMBO J. 15. 6652-6661 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kanno, A., et al.: "Chloroplast derived trnH gene is expressed in the mitochondrial genome of gramineous plants." Plant Mol.Biol.34. 353-356 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Saisho, D., et al.: "Characterization of the gene family for altenative oxidase from Arabidopsis thaliana." Plant Mol.Biol.35. 585-596 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kanno, A., et al.: "Maintenance of chloroplast-derived sequences in the mitochondrial DNA of Gramineae." Curr.Genet.32. 413-419 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ito, Y., et al.: "Transcript levels of tandem-arranged alternative oxidase genes in rice are increased by low temperature." Gene. 203. 121-129 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Miyata, S.et al.: "Transcription of plastid-derived tRNA genes in rice mitochondria." Durr.Genet.34. 216-220 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kishima Y., et al.: "Immobilized copies with a nealy intact structure of the transposon Tam3 in Antirrhinum majus : implications for the cis-element related to the transposition" Theor.Appl.Genet.95. 1246-1251 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] L.V.Dung, et al.: "Dissection of a major QTL for photoperiod sensitivity in rice : Its association with a gene expressed in an age-dependent manner." Theor.Appl.Genet.97. 714-720 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Sakamoto K,et al.: "Polymorphism of the S-locus glycoprotein gene (SLG) and the S-locus related gene (SLR1) in Raphanus sativus L.and self-incompatible ornamental plants in the Brassicaceae." Mol.Gen.Genet.258. 397-403 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Itoh, J-I.et al.: "A recessive heterochronic mutation plastochron 1, shortens the plastochron and elongates the vegetative phase in rice." Plant Cell. 10. 1511-1521 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kawai, M., et al.: "Cellular dissection of the degradation pattern of cortical cell death during aerenchyma formation of rie roots." Planta. 204. 277-287 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] J.C.Bespalhok F.and K.Hattori: "Friable embryogenic callus and somatic embryo formation from cotyledon explants of African marigold (Tagetes erecta L.)" Plant Cell Rep. 17. 870-875 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] J.Wan, et al.: "Identification of marker loci for seed dormancy in rice (Oryza sativa L.)" Crop Sci. 37. 1759-1763 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kaga, A.et al.: "A genetic linkage map of azuki bean constrcted with molecular and morphological markers using an interspecific population (Vigna angularis x V.nakashimae)." Theor, Appl.Genet.93. 658-663 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Doi, K., et al.: "RFLP mapping and QTL analysis of heading date and pollen sterility using backcross populations between O.sativa L.and Oryza glaberrima Steud." Breed.Sci.49. 395-399 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Akashi, R., et al.: "Embryogenic callus formation from protoplasts derived from suspension cells of apomictic guineagrass." Breed.Sci.45. 445-448 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kusaka,M.et al.: "Characterization of two rice genes for nuclear-encoded chloroplast ribosomal protein L12 and phylogenetic analysis of the acquisition of transit peptides" Theor.Appl.Genet.97. 110-115 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Arimura,S.et al.: "Genomic structures and thr 5′-flanking regions of the nuclear genes for chloroplast ribosomal proteins L13 and L24 of rice(Oryza sativa L.)." Breed.Sci.48. 145-149 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Miyata,S.et al.: "Transcription of plastid-derived tRNA genes in rice mitochondria." Curr.Genet.34. 216-220 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Senda M.et al.: "Recombination events across the atpA-associated repeated sequences in the mitochondrial genomes of beets." Theor.Appl.Genet.96. 964-968 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] L.V.Dung et al.: "Dissection of a major QTL for photoperiod sensitivity in rice:Its association with a gene expressed in an age-dependent manner." Theor.Appl.Genet.97. 714-720 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Yamaguchi,J.et al.: "Characterization of β-amylase and its deficiency in various rice cultivars." Theor.Appl.Genet.(in press).

    • Related Report
      1998 Annual Research Report
  • [Publications] Miyata,S.and A.Hirai: "Four kinds of plasmid-like DNA of rice mitochondria are transcribed." Breed.Sci.47. 51-55 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kanno,A.et al.: "Chloroplast derived trnH gene is expressed in the mitochondrial genome of gramineous plants." Plant Mol.Biol.34. 353-356 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kanno,A.et al.: "Maintenance of chloroplast-derived sequences in the mitochondrial DNA of Gramineae." Curr.Genet.32. 413-419 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Abe,F.et al.: "Isolation of a cDNA clone encoding the altermative oxidase expressed in rice anthers." Sex.Plant Reprod.10. 374-375 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Yamada,T.et al.: "Characterization of somatic hybrids between tetraploid Solanum tuberosum L.and dihaploid S.acaule" Breeding Science. 47. 229-236 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Wan,J.and H.Ikehashi: "Identification of two types of differentiation in cultivated rice (Oryza sativa L.) detected by polymorphism of isozymes and hybrid sterility." Euphytica. 94. 151-161 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Nakazono,M.et al.: "The gene for a subunit of the ABC-type heme transporter is transcribed together with the gene for subunit 6 of NADH dehydrogenase in rice mitochondria" Curr.Genet.29. 412-416 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Kubo,T,et al.: "A duplicated sequence in sugarbeet mitochondria transcripts is differentially edited:Analysis of orfB and its derivative orf324 mRNAs." Biochim.Biophys.Acta. 1307. 259-262 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Zeltz,P.et al.: "A promiscuous chloropast DNA fragment is transcribed in plant mitochondria but the encoded RNA is not edited." Plant Mol.Biol.31. 647-656 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Nakazono,M.et al.: "A chloroplast-derived sequence is utilized as a source of promoter sequences for the gene for subunit 9 of NADH dehydrogenase(nad9)in rice mitochondria." Mol.Gen.Genet.252. 371-378 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Kadowaki,K.et al.: "Targeting presequence acquisiton after mitochondrial gene transfer the nucleus occurs by duplication of existing targeting signal." EMBO J.15. 6652-6661 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Hong,S.K.et al.: "How is embryo size genetically regulated in rice." Development. 122. 2051-2058 (1996)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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