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Molecular Evolution of Denitrifying Systems of Fungi and Actinomycetes

Research Project

Project/Area Number 08406008
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionUniversity of Tsukuba

Principal Investigator

SHOUN Hirofumi  Institute of Applied Biochemistry, University of Tsukuba, Professor, 応用生物化学系, 教授 (70012036)

Co-Investigator(Kenkyū-buntansha) TAKAYA Naoki  Institute of Applied Biochemistry, University of Tsukuba, Research Associate, 応用生物化学系, 助手 (50282322)
Project Period (FY) 1996 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥35,000,000 (Direct Cost: ¥35,000,000)
Fiscal Year 1998: ¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 1997: ¥9,100,000 (Direct Cost: ¥9,100,000)
Fiscal Year 1996: ¥22,100,000 (Direct Cost: ¥22,100,000)
Keywordsdenitrification / Fusarium oxysporum / mitochondria / actinomycetes / cytochrome P450nor / nitric oxide reductase / nitrate reductase / nitrite reductase / 転写調節 / カビ
Research Abstract

(1) The denitrifying systems of the fungus Fusarium oxysporum and Cylindrocarpon tonkinense were shown to be localized at the mitochondrion and denitrifying enzyme activities such as nitrate reductase and nitrite reductase activities were detected in the denitrifying mitochondria coupling to the synthesis of ATP.The results resulted in the finding of an anaerobic respiration system in the fungal mitochondrion. We observed the mitochondria in the fungal cells grown under denitrifying conditions also by electron microscopy as well as the immuno-fluorescent staining, and found that the fungal mitochondria are normally progressed even under such oxygen-restricted conditions and denitrifying systems are localized to the mitochondria.
(2) Cytochrome P45Onor catalyzes a unique reaction as P450 although it belongs to the P450 superfamily. We succeeded in determining the crystal structure of P450nor, which afforded a great advance in clarifying its reaction mechanism.
(3) Although we found denitr … More ifying activities in fungi, such activities had not been found in important microbial taxa, yeasts and actinomycetes. So we screened the activities among those microorganisms and found many denitrifiers in yeasts and actinomycetes. We clarified the denitrifying systems of the actinomycete Streptomyces thioluteus and the yeasts Trichosporon cutaneum and Fellomyces fuzhouensis, We found the occurrence of P450nor in T.cutaneum and purified nitrite reductase (Nir) and azurin from S.thioluteus.
(4) We isolated and charactgerized components of the denitrifying systems of fungi that were not isolated so far, such as nitrate reductase (Nar), flavohemoglobin, and cytochrome c_<549> from F.oxysporum and Nir from C.tonkinense.
These results demonstrated for the first time the occurrence of denitrifying activities among fungi, yeasts, and actinomycetes. The eukaryotic denitrifying systems were shown to be localized at the mitochondrion coupling to the synthesis of ATP and thus act as an anaerobic respiration. These results presented not only the existence of a novel respiration system in the mitochondrion but also important aspects and subjects to be elucidated concerning the evolution of the respiratory systems Less

Report

(4 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • 1996 Annual Research Report
  • Research Products

    (26 results)

All Other

All Publications (26 results)

  • [Publications] M.Kobayashi: "Denitrification,a novel type of respiratory metabolism in fungal mitochondrion." Journal of Biological Chemistry. 271・27. 16263-16267 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] N.Takaya: "Purification and characterization of a flavohemoglobin from the denitrifying fungus Fusarium oxysporum." FEBS Letters. 414. 545-548 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] S.-Y.Park: "Crystal structure of nitric oxide reductase from denitrifying fungus Fusarium oxysporum." Nature Structural Biology. 4・10. 827-832 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] H.Shoun: "Denitrification by actinomycetes and purification of dissimilatory nitrite reductase from Streptomyces thioluteus." Journal of Bacteriology. 180・17. 4413-4415 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] S.Tsuruta: "Denitrification by yeasts and occurrence of cytochrome P450nor in Trichosporon cutaneum." FEMS Microbiology Letters. 168. 105-110 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Y.Kubota: "Membrane-associated,dissimilatory nitrite reductase of the denitrifying fungus Cylindrocarpon tonkinense." Archive Microbiology. (in press). (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] N.Takaya: "Horizontal Gene Transfer (Syvanen,M.,and Kado,C.,eds.)" Chapman and Hall,London, 474 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi, M.: "Denitrification, a novel type of respiratory metabolism in fungal mitochondrin." J.Biol.Chem.271 (27). 16263-16267 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Takaya, N.: "Purification and characterization of a flavohemoglobin from the denitrifying fungus Fusarium oxysporum." FEBS Lett.414. 545-548 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Park, S.-Y.: "Crystal structure of nitric oxide reductase from denitrifying fungus Fusarium oxysporum." Nature Str.Biol.4 (10). 827-832 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] H.Shoun: "Denitrification by actinomycetes and purification of dissimilatory nitrite reductase and azurin from Streptomyces thioluteus." J.Bacteriol.180 (17). 4413-4415 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tsuruta, S.: "Denitrification by yeasts and occurrence of cytochrome P450nor in Trichosporon cutaneum." FEMS Microbiol.Lett.168. 105-110 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kubota, Y.: "Membrane-associated, dissimilatory nitrite reductase of the denitrifying fungus Cylindrocarpon tonkinense." Arch.Microbiol.(in press.).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] N.Takaya: "Horizontal Gene Transfer (Syvanen, M., and Kado, C., eds.)" Chapman and Hall, London. 474. (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] H.Shoun: "Denitrification by actinomycetes and purification of dissimilatory nitrite reductase from Streptomyces thioluteus." Journal of Bacteriology. 180・17. 4413-4415 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Tsuruta: "Denitrification by yeasts and occurrence of cytochrome P450nor in Trichosporon cutaneum." FEMS Microbiology Letters. 168. 105-110 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Kubota: "Membrane-associated,dissimilatory nitrite reductase of the denitrifying fungus Cylindrocarpon" Archive Microbiology. (in press). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] N.Takaya: "Purification and characterization of a flavohemoglobin from the denitrifying fungus Fusarium oxysporum." FEBS Letters. 414・3. 545-548 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] N.Toritsuka: "Functional and structural comparison of nitric oxide reductases from denitrifying fungi Cylindrocarpon tonkinense and Fusarium oxysporum." Biochimica Biophysica Acta. 1338・1. 93-99 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Y.Shiro: "Nitric oxide reductase of denitrifying fungus:its structure and mechanism" Joual of inorganic Biochemistry. 67・1-4. 282-282 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] N.Takaya: "Horizontal Gene Transfer" M.Syvanen and C.Kado (in press), (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] N.Takaya: "Oxygen Homeostasis and Its Dynamics" Y.Ishimura,H.Shimada,and M.Suematsu, 620 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] M.Kobayashi: "Denitrification,a novel type of respiratory metabolism in fungal mitochondrian." Journal of Biological Chemistry. 271・27. 16263-16267 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] T.Kudo: "Two isozymes of P450nor of Cylindrocarpon tonkinense : Molecular cloning of the cDNAs and genes,expressions in the yeast,and the putative NAD(P)H." Biochimie. 78. 792-796 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] K.Nakahara: "N-terminal processing and amino acid sequence of two isoforms of nitric oxide reductase cytochrome P450nor from Fusarium Dxysporum." Journal of Biochemistry. 120・6. 1082-1087 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] N.Toritsuka: "Functional and structural comparison of nitric oxide reductases from denitrifying tungi Cylindrocarpon tonkinense and Fusarium oxyspoeum." Biochimica Biophysica Acta. (in press). (1997)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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