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Mechanism of gene expression by two-component regulatory systems and sigma factors

Research Project

Project/Area Number 08454245
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 遺伝
Research InstitutionOsaka University

Principal Investigator

MAKINO Kozo  Research Institute for Microbial Diseases : Osaka University, Associate Professor, 微生物病研究所, 助教授 (20181620)

Project Period (FY) 1996 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥7,600,000 (Direct Cost: ¥7,600,000)
Fiscal Year 1997: ¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 1996: ¥4,000,000 (Direct Cost: ¥4,000,000)
KeywordsTwo-comonent / PhoB / sigma factor / RNA polymerase / cell cycle / stress response / rpoS / DNA binding / 転写活性化因子 / リン酸レギュロン / リン酸ボックス / σ^<70>サブユニット / PCRmutagenesis
Research Abstract

The important results in this project are as belows ;
1) We determined the molecular structure of PhoB protein that is a member of the two-component regulatory systems. Especially we determined the regions of PhoB involved in the interaction with RNA polymerase and DNA binding.
2) By a systematic DNA sequencing of the E.coli hole genome, we revealed the existence of new two-component regulatory genes.
3) We revealed the existence of two-component regulatory genes is Schzosaccharomyces pombe. These genes were related to the cell cycle and stress responses.
4) We have done the molecuar cloning and functional analysis of the rpoS gene of Vibrio cholerae, which encodes the stational-specific sigma factor of RNA polymerase.

Report

(3 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] Makino, K.: "DNA binding of PhoB and its interaction with RNA polymerase." J.Mol.Biol.259. 15-26 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Oshima, T.: "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map." DNA Res.3. 211-223 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Suzuki, M.: "Multi-helical DNA-binding domains:their structures and modes of DNA-binding." Adv.Biophys.32. 31-52 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Shieh J.-C.: "The Mcs4 response regulator coordinately controls the stress-activated Wak1-Wis1-Sty1 MAP kinase pathway and fission yeast cell cycle." Genes.Dev.11. 1008-1022 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Hiratsu K.: "Molecular cloning and functional analysis of an rpoS homologue gene from Vibrio cholerae N86." Genes Genet.Syst.72. 115-118 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Yamamoto, Y.: "A 800 kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 50.1-68.0 min region on the linkage map." DNA Res.4. 91-113 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] 牧野 耕三: "癌研究法ハンドブック" 中外医学社(in press),

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Makino K., M.Amemura, T.Kawamoto, S.Kimura, H.Shinagawa, A.Nakata and M.Suzuki.: "DNA binding of PhoB and its interaction with RNA polymerase." J.Mol.Biol.259. 15-26 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Oshima T., H.Aiba, T.Baba, T.Fujita, K.Hayashi, A.Honjo, K.Ikemoto, T.Inada, T.itoh, M.Kajihara, K.Kanai, K.Kashimoto, S.Kimura, M.Kitagawa, K.Makino, S.Masuda, T.Miki, K.Mizobuchi, H.Mori, K.Motomura, Y.Nakamura, H.Nashimoto, Y.Nishio, N.Saito, G.Sampei, Y.Seki, H.Tagami, K.Takemoto, C.Wada, Y.Yamamoto, M.Yano and T.Horiuchi.: "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map." DNA Res.3 (Supplement, 211-223). 137-155 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Suzuki, M., J.Suckow, B.Kisters-Woike, H.Aramaki and K.Makino.: "Multi-helical DNA-binding domains : their structures and modes of DNA-binding." Adv.Biophys.32. 31-52 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Aiba H., T.Baba, K.Hayashi, T.Inada, K.Isono, T.Itoh, H.Kasai, K.Kashimoto, S.Kimura, M.Kitakawa, M.Kitagawa, K.Makino, T.Miki, K.Mizobuchi, H.Mori, T.Mori, K.Motomura, S.Nakade, Y.Nakamura, H.Nashimoto, Y.Nishio, T.Oshima, N.Saito, G.Sampei, Y.Seki, S.Sivasundaram, H.Tagami, J.Takeda, K.Takemoto, Y.Takeuchi, C.Wada, Y.Yamamoto and T.Horiuchi.: "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map." DNA Res.3 (Supplement, 435-440). 363-377 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Itoh T., H.Aiba, T.Baba, K.Hayashi, T.Inada, K.Isono, H.Kasai, S.Kimura, M.Kitakawa, K.Makino, T.Miki, K.Mizobuchi, H.Mori, T.Mori, K.Motomura, S.Nakade, Y.Nakamura, H.Nashimoto, Y.Nishio, T.Oshima, N.Saito, G.Sampei, Y.Seki, S,Sivasundaram, H.Tagami, J.Takeda, K.Takemoto, C.Wada, Y.Yamamoto and T.Horiuchi.: "A 460-kb DNA sequence of the Escherichis coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map." DNA Res.3 (Supplement, 441-445). 379-392 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Shieh J.-C., M.G.Wilkinson, V.Buck, B.A.Morgan, K.Makino and J.B.Millar.: "The Mcs4 response regulator coordinately controls the stress-activated Wak1-Wis1-Sty1 MAP kinase pathway and fission yeast cell cycle." Genes Dev.11. 1008-1022 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Yamamoto Y., H.Aiba, T.Baba, K.Hayashi, T.Inada, K.Isono, Takesgi Itoh, S.Kimura, M.Kitakawa, K.Makino, T.Miki, N.Mitsuhashi, K.Mizobuchi, H.Mori, S.Nakade, Y.Nakamura, H.Nashimoto, T.Oshima, S.Oyama, N.Saito, G.Sampei, Y.Satoh, S.Sivasundaram, H.Tagami, H.Takahashi, J.Takeda, K.Takemoto, K.Uehara, C.Wada, S.Yamagata and T.Horiuchi.: "Construction of a contiguous 874-kb sequence of the Escherichia coli K-12 genome corresponding to the 50.0-68.8 min on the linkage map and analysis of its sequence factures." DNA Res.4 (Supplement, 169-178). 91-113 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Hiratsu K., K.Yamamoto and K.Makino.: "Molecular cloning and functional analysis of an rpoS homologue gene from Vibrio cholerae N86." Genes Genet.Syst.72. 115-118 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Makino, K., K.Ishii, T.Yasunaga, M.Hattori, K.Yokoyama, C.Yutsudo, Y.Kubota, Y.Yamaichi, T.Iida, K.Yamamoto, T.Honda, C.-G.Han, E.Ohtsubo, M.Kasamatsu, T.Hayashi, S.Kuhara and H.Shinagawa.: "Complete nucleotide sequences of 93-kb and 3.3-kb plasmids of an enterohemorrhagic Escherichia coli O157 : H7 derived from Sakai outbreak." DNA Res.(in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Makino,K.: "DNA binding of PhoB and its interaction with RNA polymerase." J.Mol.Biol.259. 15-26 (1996)

    • Related Report
      1997 Annual Research Report
  • [Publications] Oshima,T.: "A 718-kb DNA sequence of the Escherichia coli K-12 gen ome corresponding to the 12.7 28.0 min region on the linkage map." DNA Res.3. 211-223 (1996)

    • Related Report
      1997 Annual Research Report
  • [Publications] Suzuki,M.: "Multi-helical DNA-binding domains:their structures and modes of DNA-binding." Adv.Biophys.32. 31-52 (1996)

    • Related Report
      1997 Annual Research Report
  • [Publications] Shieh J,-C.: "The Mcs4 response regulator coordinately controls the stress-activated Wak1-Wis1-Sty1 MAP kinase pathway and fission yeast cell cycle." Genes Dev.11. 1008-1022 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Hiratsu K.: "Molecular cloning and functional of an rpoS homologue gene from Vibrio cholerae N86." Genes Genet.Syst.72. 115-118 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Yamamoto,Y.: "A 800 kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 50.1-68.0 min region on the linkage map." DNA Res.4. 91-113 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 牧野耕三: "癌研究法ハンドブック" 中外医学社(in press),

    • Related Report
      1997 Annual Research Report
  • [Publications] Makino,K.: "DNA binding of PhoB and its interaction with RNA polymerase." J.Mol.Biol.259. 15-26 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Oshima,T.: "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map." DNA Res.3. 211-223 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Suzuki,M.: "Multi-helical DNA-binding domains : their structures and modes of DNA-binding" Adv.Biophys.32. 31-52 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Aiba,H.: "A 570 kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.7 min region on the linkage map." DNA Res.(in press).

    • Related Report
      1996 Annual Research Report
  • [Publications] Itoh,T.: "A 460 kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.7-50.1 min region on the linkage map." DNA Res.(in press).

    • Related Report
      1996 Annual Research Report
  • [Publications] Yamamoto,Y.: "A 800 kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 50.1-68.0 min region on the linkage map." DNA Res.(in press).

    • Related Report
      1996 Annual Research Report
  • [Publications] 牧野耕三: "癌研究法ハンドブック" 中外医学社(in press),

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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