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Functional expression and vtilization of denitrification genes from bacteria

Research Project

Project/Area Number 08456047
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionThe University of Tokyo

Principal Investigator

IGARASHI Yasuo  The University of Tokyo, Deportment of Biotechnology, Grad. Sch. of Agri. Life Sci., Professor, 大学院・農学生命科学研究科, 教授 (90114363)

Co-Investigator(Kenkyū-buntansha) ISHII Masaharu  The University of Tokyo, Deportment of Biotechnology, Grad. Sch. of Agri. Life S, 大学院・農学生命科学研究科, 助教授 (30193262)
Project Period (FY) 1996 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥7,200,000 (Direct Cost: ¥7,200,000)
Fiscal Year 1997: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 1996: ¥6,100,000 (Direct Cost: ¥6,100,000)
KeywordsDenitrification / Pseudomonas aeruginosu / nitrite reductase / 緑膿菌 / 脱窒遺伝子 / ヘムd1
Research Abstract

The following results were obtained during the research period.
1. Clarification of denitrifying genes
Before this research period, gene sequences for nirSMCF genes including structural gene for nitrite reductase, nirS,had been clarified. This time, 3-prime further downstream sequences of nirF were determined ; the whole operon sequence could be known as nirAMCFDLGHJEN.Among these genes, nirE gene had a high homology with those for S-adenosyl-L-methionine : uroporphyrinogen III methyltransferase. Furthermore, nirFDLGHJE genes were all needed for Heme d_1 biosynthesis.
2. Function of ANR and DNR
A new regilatory gene, dnr, was discovered and its effect for denitrification was shown as follows.
(1) Cascade system exists (ANR-DNR-denitrification)
(2) DNR does not regulate activity of alginate deiminase nor cyanide formation.
(3) We could not demonstrate if DNR protein has a binding affinity for the promotor region which exists upstream of nirS gene.

Report

(3 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • Research Products

    (6 results)

All Other

All Publications (6 results)

  • [Publications] Shinji kawasaki, Hiroyuki Arai, Tohru Kodama and Yasuo Igarashi: "Gene cluster for dissimilatory nitrite reductase (nir) from Pseudomonas aeruginosa : Sequencing and identificayion of a locus for Heme d_1 biosynthesis." J.Bucteriol.179-1. 235-242 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Hiroyuki Arai, Tohru Kodama, and Yasuo Igarashi: "Cascade regulation of the two CRP/FNR-related transcriptional regulators (CANR and DNR) and the denitrification enzymes in Pseudomonas aeruginosa" Mol.Microbiol.25-6. 1141-1148 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Shinji Kawasaki S: "Gene Cluster for Dissimilatory Nitrite Reductase (mir) from Pseudomonas aeruginosa : Sequencing and Identification of a Locus for Heme d,Biosynthes`s" J.Bacteriol.179・1. 235-242 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Hiroyuki Arai S: "Cascade regulation of the two CRP/FNR-related transcription regulators (ANR and DNR) and the denitrification Enzymes." Mol.Microbiol.25・6. 1141-1148 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] S.KAWASAKI: "Gene cluster of dissimilatory nitrite redactase from Pseadomones aeraginosa" J.Bacleriology. 179・Vol1(印刷中). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] H.Arai: "Molecular Biology of Pseudomonas" ASM Press, 526 (1996)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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