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Mechanisms of viral RNA replication in the Sindbis-virus superfamily

Research Project

Project/Area Number 08457092
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Virology
Research InstitutionThe University of Tokyo

Principal Investigator

SHIRAKO Yukio  Asian Natural Environmental Science Center, Professor, アジア生物資源環境研究センター, 教授 (90143023)

Project Period (FY) 1996 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 1997: ¥1,200,000 (Direct Cost: ¥1,200,000)
KeywordsRNA virus / Virus Replication / RNA polymerase / Viral genome analysis / infectious cDNA clone / 分子進化 / 遺伝子解析 / 塩基配列
Research Abstract

The alphavirus superfamily includes several families of positive-stranded, plant and animal RNA viruses. To study mechanisms of viral RNA replication in the alphavirus superfamily, full-length cDNA clones from which infectious RNA transcripts are produced in vitro were constructed.
The two full-length cDNA clones to RNA 1 and RNA 2 of soil-borne wheat mosaic virus (Japan-Tochigi isolate), pJS1 and pJS2 respectively, were constructed in a bacterial plasmid. In both clones, the 5' end of the cDNA insert was placed immediately downstream of the SP6 promoter and the 3'end was followed by a unique SpeI site for plasmid linearization. When in vitro transcripts from pJS1 and pJS2 were mixed and inoculated mechanically on Chenopodium quinoa leaves, typical chlorotic spots with 2 to 3 mm in diameter appeared on the inoculated leaves in 7 to 10 days. From the chlorotic spots, the capsid protein was detected by Western blot analysis and the infectious virus was recovered from the sap. In vitro transcripts from the pJS1 and pJS2 were also infectious to wheat plants and the capsid protein was detected from uninoculated upper leaves by Western analysis, indicating that the virus spread systemically.
The full-length cDNA clones of Sagiyama virus, an alphavirus isolated in Japan in 1956, were also constructed in a bacterial plasmid downstream of the SP6 or T7 promoter. In vitro transcripts from a full-length cDNA clone pSAG2 was infectious to BHK21 cells and a virus with the wild-type phenotype was recovered from the medium after RNA transection.

Report

(3 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • Research Products

    (9 results)

All Other

All Publications (9 results)

  • [Publications] Y., Shirako: "NonAUG translation initiation in a plant RNA virus genomo:a forty-amino-acidextention is added to the N terminus of the soi Home uheat mosaic virus capsid protein" Journal of Virology. 72. 1677-1682 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y., Shirako: "Requiremout for an aromatic amino acid or histidine at the N terminus of Sindbis virus RNA pdymernse" Journal of Virology. 72. 2310-2315 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Weaver, S.C.: "Recombinational history and molecular evolution of western equine encophalomyelitis complex alphaviruses" Journal of Virology. 613-623 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Yukio Shirako: "Non-AUG translation., initiation in a plant RNA virus genome : a forty-amino-acid extention is added to the N terminus of the Soil-borne wheat mosaic virus capsid protein." Journal of Virology. vol.72. 1677-1682 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Yukio shirako and James H.Strauss: "Requirement for an aromatic amino acid or histidine at the N terminus of Sindbis virus RNA polymerase." Journal of Virology. vol.72. 2310-2315 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Weaver, SC., Kang, W., Shirako, Y., Rumenapf, T., Strauss, E.G.and Strauss: "J.H.Recombinational history and molecular evolution of Western equine encepholo-myelitis complex alphaviruses." Journal of Virology. vol.71. 613-623 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Shirako: "Non AUG translation initiation in a plant RNA virus genome : a forty-amino-acid extension is added to the N terminus of the soil-borne wheat masaic virus capsid protein" Journal of Virology. 72. 1677-1682 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Y.Shirako: "Requirement for an aromatic amino acid or histidine at the N terminus of Sindbis virus RNA polymerase" Journal of Virology. 72. 2310-2315 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Weaver,S.C.et al: "Recombinational history and molecular evolution of Western equine encephalomyelitis complex alphaviruses" Journal of Virology. 71. 613-623 (1997)

    • Related Report
      1996 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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