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Molecular anatomy of protein translocation machineries in yeast mitochondria

Research Project

Project/Area Number 08458180
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Structural biochemistry
Research InstitutionNagoya University

Principal Investigator

ENDO Toshiya  Nagoya University Faculty of Science Professor, 大学院・理学研究科, 教授 (70152014)

Co-Investigator(Kenkyū-buntansha) NISHIKAWA Shuh-ichi  Nagoya University Faculty of Science Research Associate, 大学院・理学研究科, 助手 (10252222)
Project Period (FY) 1996 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥7,500,000 (Direct Cost: ¥7,500,000)
Fiscal Year 1997: ¥2,700,000 (Direct Cost: ¥2,700,000)
Fiscal Year 1996: ¥4,800,000 (Direct Cost: ¥4,800,000)
Keywordsyeast / mitochondria / tarnslocation machinery / the TOM complex / the TIM complex / precursor protein / タンパク質輸送 / 光架橋
Research Abstract

Most of mitochondrial proteins are synthesized as precursor proteins in the cytosol and imported into mitochondria with the aid of protein translocation machineries in the outer and the inner membranes called the TOM complex and the TIM complex, respectively, In the present study, we analyzed subunit arrangements, structures, and precursor interactions of the mitochondrial translocation machineries.
The TOM complex consists of receptor proteins, Tom7O, Tom37, Tom2O and Tom22, a channel protein, Tom4O, and small Tom proteins, Tom5, Tom6 and Tom7, By using differential solubilization methods, we found that Tom7OiTom37 and Tom2O/Tom22/Tom4O form distinct subcomplex structures in the TOM complex. We prepared cytosolic domains of Tom7O and Tom22 in large amounts and analyzed Tom7O-Tom2O interactions by glycerol gradient centrifugation. The results showed that a positively charged segment just downstream of the N-terminal transmembrane segment of Tom22 is important for interactions of Tom2O with possibly a negatively charged domain of Tom7O.Next, a tertiary structure of the cytosolic domain of Tom2O was determined by NMR spectroscopy. A binding site for presequences is also mapped on the NMR structure. In the last, we introduced a photoreactive unnatural amino acids into various positions along mitochondrial precursor protein by suppressor *RNA method, By using these labeled precursor proteins, interactions of the translocating polypeptide chains with components of the mitochondrial translocation machineries were analyzed by photocrosslinking at a high resolution that had not been obtained so far.

Report

(3 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • Research Products

    (42 results)

All Other

All Publications (42 results)

  • [Publications] T.Endo et al.: "Binding of mitochondrial presequences to yeast cytosolic hsp70 depends on the amphiphilicity of the presequence" J.Biol.Chem.271. 4161-4167 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] N.Pfanner et al.: "Uniform nomenclature for the protein stransport machinery of the mitochondrial membranes." Trends Biochem.Sci.21. 51-52 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Nohara et al.: "Cytochrome f encoded by the chloroplast genome is imported into thylakoids via the secA-dependent pathway." Biochem.Biophys.Res.Commun.224. 474-478 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Endo et al.: "Binding of mitochondrial presequences to yeast cytosolic heat shock protein 70 depends on the amphiphilicity of the presequence." J.Biol.Chem.271. 4161-4167 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] M.Sugita et al.: "Organization of a large gene cluster encoding ribosomal proteins in the cyanobacterium Synechococcus sp. strain PCC6301: comparison of gene clusters among cyanobateriua,eubacteria and chloroplast genes." Gene. 195. 73-76 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Kanamori et al.: "Probing the environment along the protein import pathways in yeast mitochondria by site-specific photocrosslinking." Proc.Natl.Acad.Sci.USA. 94. 485-490 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] S.Nishikawa and T.Endo: "The yeast JEMlp is a DnaJ-like protein of the endoplasmic reticulum membrane required for nuclear fusion." J.Biol.Chem.272. 12889-12982 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] J.Iwahashi et al.: "Analysis of the functional domain of the rat liver mitochondrial import receptor Tom20" J.Biol.Chem.272. 18467-18472 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] 遠藤斗志也ら: "ミトコンドリアへのターゲティングと膜透過" 細胞工学. 6. 1275-1281 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] S.Nishikawa and T.Endo: "Reinvestigation of the functions of the hydrophobic segment of Jemlp,a yeast endoplasmic reticulum membrane protein mediating nuclear fusion." Biochem.Biophys.Res.Commun.244. 785-789 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] 野原哲也,遠藤斗志也: "in vitro転写・翻訳系を用いたタンパク質合成" 細胞工学別冊. 9. 37-45 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] M.Oka et al.: "Loss of hsp70-hsp40 chaperone activity causes abnormal nuclear distribution and aberrant microtubule formation in M-phase of Saccharomyces cerevisiae." J.Biol.Chem.273. 29727-29737 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Kubo et al.: "Two distinct mechanisms opearte in reactivation of heat-denatured proteins by the mitochondrial Hsp70/Mdjlp/Ygelp chaperone system." J.Mol.Biol.286. 447-464 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Kanamori et al.: "Uncoupling of transfer of the presequence and unfolding of the mature domain in precursor translocation across the mitochondrial outer membrane." Proc.Natl.Acad.Sci.USA. 96in press. (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Endo(分担執筆): "Membrane Proteins: Structure, Function and Expression Control.(N.Hamasaki and K.Mihara eds) Kyushu University Press / S.Karger AG, Fukuoka / Basel" Assembly of thylakoid membrane proteins in chloroplasts., 191-197 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Endo(分担執筆): "Molecular Chaperones in Proteins: Structure,Function,and Mode of Action (A. Fink and Y.Goto,eds) Marcel Dekker,Inc. New York" Roles of molecular chaperones in mitochondrial protein import., 435-466 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] 西川周一,遠藤斗志也(分担執筆): "酵母ラボマニュアル:酵母分子細胞生物学実験法(山本正幸,大矢禎一編) シュプリンガーフェアラーク(東京)" オルガネラの機能解析:ミトコンドリア, 191-211 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] 西川周一,遠藤斗志也(分担執筆): "新版 微生物学実験法(大和田紘一,黒岩常祥,杉村純多,高橋秀夫,徳田元,渡辺 信著)高段者サイエンティフィック(東京)" 酵母の細胞内構造体の調整法印刷中, (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] 西川周一,遠藤斗志也(分担執筆): "生物化学実験法シリーズ(江尻慎一郎,平 秀晴,堤 賢一,志村憲介編) 学会出版センター" 無細胞蛋白質生合成系:蛋白質生産システム印刷中, (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Endo et al.: "Binding of mitochondrial presequences to yeast cytosolic hsp70 depends on the amphiphilicity of the presequence" J.Biol.Chem.271. 4161-4167 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] N.Pfanner et al.: "Uniform nomenclature for the protein transport machinery of the mitochondrial membranes" Trends Biochem.Sci.21. 51-52 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Nohara et al.: "Cytochrome f encoded by the chloroplast genome is imported into thylakoids via the SecA-dependent pathway" Biochem.Biophys.Res.Commun.224. 474-478 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Kanamori et al.: "Probing the environment along the protein import pathways in yeast mitochondria by site-specific photocrosslinking" Proc.Natl.Acad.Sci.U.S.A.94. 485-490 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] M.Sugita et al.: "Organization of a large gene cluster encoding ribosomal proteins in the cyanobacterium Synechococcus sp.strain PCC6301" Gene. 195. 73-79 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Endo et al.: "Mitochondrial protein targeting and translocation across the membranes" Cell Technology (in Japanese). 16. 1275-1281 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Endo: "Roles of molecular chaperones in mitochondrial protein import" In Molecular Chaperones in Proteins : Structure, Function, and Mode of Action, A.Fink and Y.Goto, eds. (New York : Marcel Dekker, Inc.). 435-466 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Endo: "Assembly of thylakoid membrane proteins in chloroplasts." In Membrane proteins : Structure, Function and Expression Control, N.Hamasaki and K.Mihara, eds. (Basel : Karger). 191-197 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] J.Iwahashi et al.: "Analysis of the functional domain of the rat liver mitochondrial import receptor Tom20" J.Biol.Chem.272. 18467-18472 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] S.Nishikawa and T.Endo: "The yeast JEM1p is a DnaJ-like protein of the endoplasmic reticulum membrane required for nuclear fusion." J.Biol.Chem. 272. 12889-12892 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] S.Nishikawa and T.Endo: "Reinvestigation of the functions of the hydrophobic segment of Jem1p, a yeast endoplasmic reticulum membrane protein mediating nuclear fusion." Biochem.Biophys.Res.Commun.244. 785-789 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] M.Oka et al.: "Loss of hsp70-hsp40 chaperone activity causes abnormal nuclear distribution and abberrant microtubule formation in M-phase of Saccharomyces cerevisiae." J.Biol.Chem.273. 29727-29737 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Y.Kudo et al.: "Two distinct mechanisms operate in reactivation of heat-denatured proteins by the mitochondrial Hsp70/Mdj1p/Ygelp chaperone system." J.Mol.Biol. 286. 447-464 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Kanamori et al.: "Uncoupling of transfer of the presequence and unfolding of th mature domain in precursor translocation across the mitochondrialmembrane." Proc.Natl.Acod.Sci.USA. 96, (in press). (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] T.Kanamori et al.: "Probing the environment along the protein import pathways in yeast mitochondria by site-specific photocrosslinking." Proc.Natl.Acad.Sci.USA. 94. 485-490 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] S.Nishikawa and T.Endo: "The yeast JEMlp is a DnaJ-like protein of the endoplasmic reticulum membrane required for nuclear fusion" J.Biol.Chem.272. 12889-12982 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] J.Iwahashi et al.: "Analysis of the functional domain of the rat liver mitochondrial import receptor Tom20" J.Biol.Chem.272. 18467-18472 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 遠藤斗志也ら: "ミトコンドリアへのターゲティングと膜透過" 細胞工学. 6. 1275-1281 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] S.Nishikawa and T.Endo: "Reinvestigation of the functions of the hydrophobic segment of Jemlp,a yeast endoplasmic reticulum membrane protein mediating nuclear fusion." Biochem.Biophys.Res.Commun.(in press). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] T.Endo(分担執筆): "Membrane Proteins:Structure,Function and Expression Control.(N.Hamasaki and k.Mihara eds)Kyusyu University Press/S.Karger AG,Fukuoka/Basel" Assembly of thylakoid membrane proteins in chloroplasts., 191-197 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] T.Endo(分担執筆): "Molecular Choperones in Proteins:Structure, Function, and Mode of Action(A.Fink and Y.Goto, eds) Marcel Dekker, Inc.New York" Roles of molecular chaperones in mitochondrial protein import., 435-466 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] T.Endo et al.: "Binding of mitochondrial presequences to yeast cytosolic hsp70 depends on the amphiphilicity of the presequence." J.Biol.Chem.271. 4161-4167 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] T.Kanamori et al.: "Probing the environment along the protein import pathways in yeast mitochondria by site-specific photocrosslinking." Proc.Natl.Acad.Sci.USA. 94. 485-490 (1997)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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