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Systematic isolation and analysis of novel genes that control cell cycle and cell growth.

Research Project

Project/Area Number 08458220
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionOsaka University

Principal Investigator

NOJIMA Hiroshi  Osaka University, Research Institute for Microbial Diseases, Professor., 微生物病研究所 (30156195)

Co-Investigator(Kenkyū-buntansha) KIMURA Shinya  Osaka University, Research Institute for Microbial Diseases, Technical Official, 微生物病研究所, 教務職員 (70273703)
NABESHIMA Kentaro  Osaka University, Research Institute for Microbial Diseases, Research Associate., 微生物病研究所, 助手 (60294120)
TANAKA Seiji  Osaka University, Research Institute for Microbial Diseases, Research Associa, 微生物病研究所, 助手 (50263314)
Project Period (FY) 1996 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥6,400,000 (Direct Cost: ¥6,400,000)
Fiscal Year 1998: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 1997: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 1996: ¥3,600,000 (Direct Cost: ¥3,600,000)
KeywordsSubtraction / cDNA Library / Meiosis / Spermiogenesis / Go phase / Osteoclast / MITF / Metastasis / Gin4 / DNA傷害 / DNA複製開始 / 蛋白質キナーゼ / ヒドロキシ尿素 / 複製ライセンス因子 / サイクリンG / CDK5 / FISH / ウエスタンブロット / モノクローナル抗体
Research Abstract

In order to isolate systematically the genes that control cell cycle and cell growth, we have established an improved protocol to prepare a subtracted cDNA library of high quality that allowed the large-scale isolation of transcriptionally induced mRNA (cDNA) species. Using this protocol, we prepared subtracted cDNA libraries of several experimental systems as described below. To perform the efficient and comprehensive isolation of the clones involved in the subtracted cDNA library, we also developed a stepwise subtraction method. By applying these techniques, we have isolated a large number of novel cDNA clones in the following experimental systems. They are comprehensively named as TISP (Transcription increased in spermiogenesis), meu (meiotic expression upregulated), EPOC (Expressed predominantly in osteoclast), TIGA (Transcription increased by growth arrest), ElM (Epxpression increased in mi mouse), TIB (Transcription increased in BL6 mouse), TRIF (Transcription reduced in F2408) and SSR (shear Stress Responsive). By DNA sequencing, we found that about half of these genes are novel, and some of them have not been registered in the gene bank even as EST (expressed sequence tag). We have examined the functions of these genes and found that many of them displayed biologically important functions. These results indicate that our strategy is applicable to a wide variety of biological phenomena in which the trancriptional up or down regulation play the important role in these phenomena and is useful to understand the regulatory mechanisms of otherwise unresolvable biological problems.

Report

(4 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • 1996 Annual Research Report
  • Research Products

    (33 results)

All Other

All Publications (33 results)

  • [Publications] Ito, A., et al.: "Granzyme B is a transcriptional target of MITF in murine mast cells." Blood. 91. 3210-3221 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobori M., et al.: "Large scale isolation of osteoclast-specific genes by an improved method involving the preparation of a subtracted cDNA library." Genes to Cells. 3. 459-475 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tsubota, Y., et al.: "Negative regulation of the rat cdc2 promoter in G1 by the silencer element" Cell Growth Diff.9. 257-265 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Suzuki, M., et al.: "A novel E2F binding protein with Myc-type HLH motif stimulates E2F-dependent transcription by forming a heterodimer." Oncogene. 17. 853-865 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ohtani, K., et al.: "Cell-growth-regulated expression of mammalian MCM5 and MCM6 genes mediated by the transcription factor E2F." Oncogene. in press.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Fujii, T., et al.: "Sperizin is a murine RING zinc finger protein specifically expressed-in haploid germ cells." Genomics. in press.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ito, A., et al.: "Granzyme B is a transcriptional target of MITF in murine mast cells." Blood. 91. 3210-3221 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobori M., et al.: "Large scale isolation of osteoclast-specific genes by an improved method involving the preparation of a subtracted cDNA library." Genes to Cells. 3. 459-475 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tsubota, Y., et al.: "Negative regulation of the rat cdc2 promoter in G1 by the silencer element." Cell Growth Diff.9. 257-265 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Suzuki, M., et al.: "A novel E2F binding protein with Myc-type HLH motif stimulates E2F-dependent transcription by forming a heterodimer." Oncogene. 17. 853-865 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ohtani, K., et al.: "Cell-growth-regulated expression of mammalian MCM5 and MCM6 genes mediated by the transcription factor E2F." Oncogene. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Fujii, T., et.al.: "Sperizin is a murine RING zinc finger protein specifically expressed in haploid germ cells." Genomics. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ito,A.,et al.: "Granzyme B is a transcriptional target of MITF in murine mast cells." Blood. 91. 3210-3221 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kobori M.,et al.: "Large scale isolation of osteoclast-specific genes by an improved method involving the preparation of a subtracted cDNA library." Genes to Cells. 3. 459-475 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Tsubota,Y.,et al.: "Negative regulation of the rat cdc2 promoter in G1 by the silencer element." Cell Growth Diff.9. 257-265 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Suzuki,M.,et al.: "A novel E2F binding protein with Myc-type HLH motif stimulates E2F-dependent transcription by forming a heterodimer." Oncogene. 17. 853-865 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Ohtani,K.,et al.: "Cell-growth-regulated expression of mammalian MCM5 and MCM6 genes mediated by the transcription factor E2F." Oncogene. (in press).

    • Related Report
      1998 Annual Research Report
  • [Publications] Fujii,T.,et al.: "Sperizin is a murine RING zinc finger protein specifically expressed in haploid germ cells." Genomics. (in press).

    • Related Report
      1998 Annual Research Report
  • [Publications] Konaoka,Y., et al.: "GAK : a cyclin G associatde kinase contains a tensin/auxilin-like domain." FEBS Lett.402. 73-80 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ishida,A., et al.: "Induction of the cyclin-dependent kinase inhibitor p21^<Sdi/Cip1/Wafl> by nitric oxide-generating vasodilator in vascular smooth muscle cells." J.Biol.Chem.272. 10050-10057 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kubota,Y., et al.: "Licensing of DNA replication by a multi-protein complex of MCM/P1 proteins in Xenopus eggs." EMBOJ.16. 3320-3331 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Tsuruga,H., et al.: "HsMCM6 : a new member of the human MCM/P1 family encodes a protein homologous to fission yeast Mis5." Genes to Cells. 2. 381-399 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Tsuruga,H., et al.: "Expression,nuclear localization and interactions of human MCM/P1 proteins." Biochem.Biophys.Res.Commun.236. 118-125 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kimura,S.H., et al.: "Structure,expression,and chromosomal localization of human GAK." Genomics. 44. 179-187 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kondoh,N., et al.: "Assignment of synaptonemal complex protein 1 (SCP1) to human chromosome 1p 13 by fluorescence in situ hybridization and its expression in the testis." Cytogenet.Cell Genet.78. 103-104 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Satoh,T., et al.: "Assignment of the human CDC21 (MCM4) gene to chromosome 8q11.2." Genomics. 46. 525-526 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Matsui,M., et al.: "Mapping of six germ cell-specific genes to mouse chromosomes." Mamm.Genome. 8. 873-874 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Okuzaki,D., et al.: "Gin4 of S.cerevisiaeis a bud neck protein that interacts with the Cdc28 complex." Genes to Cells. 2. 753-770 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ito,A., et al.: "Granzyme B is a transcriptional target of MITF in murine mast cells." Blood. (in press).

    • Related Report
      1997 Annual Research Report
  • [Publications] Sasaguri,T.,et al.: "Phorbol ester inhibits the phosphorylation of the retinoblastoma protein without suppressing cyclin D-associated kinase in vasucular smooth muscle cells." J.Biol.Chem.271. 8351-8354 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Tanaka,S.,et al.: "a Nim1-like protein kinase of S.cerevisiae interacts with the Cdc28 complex and regulated cell cycle progression." Genes to Cells. 1. 905-921 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Endo,Y.,et al.: "Structure and chromosomal assignment of the human cyclin G gene." Genomics. 38. 92-95 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Kanaoka,Y.,et al.: "GAK : a cyclin G associatde kinase contains a tensin/auxilin-like domain." FEBS Lett.402. 73-80 (1997)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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