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Molecular mechanism of antizyme frameshifting

Research Project

Project/Area Number 08458223
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionJikei University School of Medicine

Principal Investigator

MATSUFUJI Senya  Jikei University School of Medicine, Faculty of Medicine, Associate Professor, 医学部, 助教授 (50192753)

Project Period (FY) 1996 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥6,700,000 (Direct Cost: ¥6,700,000)
Fiscal Year 1998: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1997: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 1996: ¥4,000,000 (Direct Cost: ¥4,000,000)
Keywordstranslational frameshifting / recoding / translational control / ornithine decarboxylase antizyme / polyamines / expression vector / DNA transfection / Schizosaccharomyces pombe / 発現バクター / 翻訳終結因子 / ゼブラフィッシュ / トランスフェクション
Research Abstract

1. Two sequence elements on antizyme mRNA, a pseudoknot structure downstream to and a GC-rich region upstream to the frameshift site, were confirmed to be stimulatory signals for the frameshifting both in cell-free and animal cell culture systems. The upstream element was shown to interact with elongating ribosomes. These cis-acting elements also increased the efficiencies of other frameshift events such as viral -l frameshifting. However, the frameshiftstimulating effect of polyamines was not mediated by interaction between the cis-acting elements and polyamines. Certain recoding phenomena at the terminator codons such as +1 frameshifting on E.coli release factor 2 (RE2) signal and stop codon readthrough on viral signals were also enhanced by polyamines. The possibility that polyamines repress the termination process was not supported by experimental results. The polyamine-interacting site(s)for frameshift stimulation is to be determined in the future.
2. Analysis of frameshift efficie … More ncy and polyamine contents in transfected mammalian cells which stably express the reporter construct revealed that the unbound polyamines are responsible for the stimulation of antizyme frameshifting in the cells.
3. Some compounds which either stimulate or inhibit antizyme frameshifting were found.
Agmatine was one of the stimulatory substances, agmatine and showed anti-proliferative effect through depletion of the cellular polyamines. Diamine derivatives which inhibit the frameshifting in competition with polyamines will be useful as molecular probes to search the polyamine-interacting site(s).
4. Antizyme cDNAs of chicken and zebrafish were isolated. Alternative functions of new antizyme isoforms were also found. These results revealed that antizyme and its frameshifting are phylogenetically old and widely distribute.
5. A fission yeast, Schizosaccharomyces pombe, was shown to be a suitable model organism for genetic screening of trans-acting factors involved in antizyme frameshifting. Construction of an assay system for polyamine-dependent antizyme frameshifting in S.pombe is underway. Less

Report

(4 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • 1996 Annual Research Report
  • Research Products

    (24 results)

All Other

All Publications (24 results)

  • [Publications] Matsufuji S: "Assignment of the human antizyme gene(OAZ)to chromosome 19p13.3 by fluorescence in situ hybridization." Genomics. 38・1. 15313-15316 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Verma AK: "Superinduction of mouse epidermal ornithine decarboxylase activity by repeated 12-O-tetradecanoylphorbol-13-acetate treatments." Mol Cell Biochem. 155. 139-151 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 松藤千弥: "遺伝暗号を解読する新ルール“リコーディング"." 細胞工学. 15・8. 1076-1086 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Koguchi K: "Cloning and sequencing of a human cDNA encoding ornithine decarboxylase antizyme inhibitor." Biochim Biophys Acta. 1353・3. 209-216 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Hayashi T: "Characterization of the human antizyme gene." Gene. 203・2. 136-139 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Satriano J: "Agmatine suppresses proliferation by frameshift induction of antizyme and attenuation of cellular polyamine levels." J Biol Chem. 273・25. 15313-15316 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ivanov IP: "Programmed frameshifting in the synthesis of mammalian antizyme is +1 in mammals, predominantly +1 in fission yeast, but -2 in budding yeast." RNA. 4・10. 1230-1238 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Atkins JF: "The RNA World, 2nd Ed." Cold Spring Harbor Laboratory Press. Cold Spring Harbor, NY, 709 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Matsufuji S: "Assignment of the human antizyme gene (OAZ) to chromosome 19p13.3 by fluorescence in situ hybridization." Genomics. 38(1). 102-104 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Verma AK: "Superinduction of mouse epidermal ornithine decarboxylase activity by repeated 12-O-tetradecanoylphorbol-13-acetate treatments." Mol Cell Biochem. 155. 139-151 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Matsufuji S: "(in Japanese) Recoding : New rules of genetic decoding." Saiboukougaku. 15(8). 1076-1086 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Koguchi K: "Cloning and sequencing of a human cDNA encoding ornithine decarboxylase antizyme inhibitor." Biochim Biophys Acta. 1353(3). 209-216 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Hayashi T: "Characterization of the human antizyme gene." Gene. 203(2). 131-139 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Satriano J: "Agmatine suppresses proliferation by frameshift induction of antizyme and attenuation of cellular polyamine levels." J Biol Chem. 273(25). 15313-15316 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ivanov IP: "Programmed frameshifting in the synthesis of mammalian antizyme is +1 in mammals, predominantly +1 in fission yeast, but -2 in budding yeast." RNA. 4(10). 1230-1238 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Atkins JF: Dynamics of the genetic code.The RNA World, 2nd Ed., Gesteland RF et al.eds.pp.637-673. Cold Spring Harbor Laboratory Press. Cold Spring Harbor, NY., 709 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Satriano J: "Agmatine suppresses proliferation by frameshift induction of antizyme and attenuation of cellular polyamine levels." J Biol Chem. 273・25. 15313-15316 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Ivanov IP: "Programmed frameshifting in the synthesis of mammalian antizyme is+1 in mammals,predominantly+1 in fission yeast,but-2 in budding yeast." RNA. 4・10. 1230-1238 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Atkins JF: "The RNA World,2nd Ed." Cold Spring Harbor Laboratory Press.Cold Spring Harbor,NY, 709 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] K.Koguchi: "Cloning and sequencing of a human cDNA encoding ornithine decarboxylase antizyme inhibitor." Biochim.Biophys.Acta. 1353・3. 209-216 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] T.Hayashi: "Characterization of the human antizyme gene." Gene. 203・2. 131-139 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] S.Matsufuji: "Assignment of the Human Antizyme Gene (OAZ) to Chromosome 19p13.3 by Fluorescence in Situ Hybridization." Genomics. 38・1. 102-104 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] A.K.Verma: "Superinduction of mouse epidermal ornithine decarboxylase activity by repeated 12-O-tetradecanoylphorbol-13-acetate treatments." Mol.Cell.Biochem.155・1. 139-151 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 松藤千弥: "遺伝暗号を解読する新ルール"リコーディング"" 細胞工学. 15・8. 1076-1086 (1996)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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