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Studies on rapid molecular method for detection of new histamine-producing bacteria and new acidophilic spoilage bacteria.

Research Project

Project/Area Number 08556034
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section展開研究
Research Field Fisheries chemistry
Research InstitutionTokyo University of Fisheries

Principal Investigator

FUJII Tateo  Tokyo University of Fisheries ; Department of Food Science and Technology, Professor, 水産学部, 教授 (30093305)

Co-Investigator(Kenkyū-buntansha) SHINANO H.  Hokkaido University ; Professor, 水産学部, 教授(元) (10001603)
YAMAZAKI K  Hokkaido University ; Associate Professor, 水産学部, 助教授 (40250500)
INOUE T.  Hokkaido University ; Professor, 水産学部, 教授 (60002086)
YOKOMOTO Y.  Perkin Elmer, Japan ; Reseacher, 研究員
KIMURA B.  Tokyo University of Fisheries ; Associate Professor, 水産学部, 助教授 (50262340)
Project Period (FY) 1996 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥19,700,000 (Direct Cost: ¥19,700,000)
Fiscal Year 1998: ¥3,200,000 (Direct Cost: ¥3,200,000)
Fiscal Year 1997: ¥10,100,000 (Direct Cost: ¥10,100,000)
Fiscal Year 1996: ¥6,400,000 (Direct Cost: ¥6,400,000)
Keywordshistamine / histamine-producing bacteria / rapid detection / molecular method / TaqMan method / PCR / Alicyclobacillus acidoterrestris / Clostridium perfringens / PCR法 / TagMan法 / Photobacterium histaminum / Clostridium perfringens / アレルギー様食中毒 / 変敗飲料缶詰 / Alicyclobacillus / 16SrDNA
Research Abstract

1. Fujii and Kimura(Tokyo University of Fisheries), Yokomoto(Perkin Elmer, Japan)
The purpose of this study was to establish a rapid molecular method for detecting histamine-producing bacteria, the causative agent of scombroid poisoning. The Photobacterium histaminum hdc gene encoding an inducible histidine decarboxylase(HisDcase), that is involved in a large scale excretion of histamine extracellularly, has been cloned by using the N-terminal amino acid sequence of the purified protein. The cloned chromosomal fragment containing the hdc gene was sequenced. Oligonucleotide primers were designed for the PCR amplification of hdc genes of P.histaminum and several other gram-negative histamine-producing bacteria. The optimal PCR conditions for detecting histamine-producing bacteria were evaluated.
Also, the TaqMan PCR assay for rapid detection of bacteria was evaluated, using Salmonella. This system uses the 5' nuclease activity of Taq DNA polymerase which digests an internal fluorogenic probe to monitor the amplification of the target gene. These results indicate that TaqMan is a reliable and rapid method for Salmonella analysis in the food industry.
2. Shinano, Inoue, Yamazaki (Hokkaido University)
Using specific region of 16S rRNA gene, RT-PCR method enabled the detection of A.acidoterrestris, a new type of thermoacidophilic spoilage bacterium in acidic beverages. A PCR method for Clostridium perfringens with fluorogenic probes was also developed. Additionally, PCR fragment length typing of the internal spacer region between the 16S and 23S rRNA genes was found to be rapid and reliable to distinguish C.perfringens among clostridia. DNA/RNA extracting methods from food, developed in this study, were proved to be practical.

Report

(4 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • 1996 Annual Research Report
  • Research Products

    (18 results)

All Other

All Publications (18 results)

  • [Publications] K.Yamazaki: "Specific primers for detection of Alicyclobacillus acidoterrestris by RT-PCR" Lett.Appl.Microbiol.23. 350-354 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Satomi: "Tetragenococcus muriaticus sp.nov., a new moderately halophilic lactic acid bacterium isolated from fermented squid liver sauce" Int.J.Syst.Bacteriol.47・3. 832-836 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] K.Yamazaki: "Amplified Polymorphic DNA(RAPD) for Rapid Identification of Spoilage Bacterium. Alicyclobacillus acidoterrestris." Biosci.Biotech.Biochem.61・6. 1016-1018 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 山崎浩司: "酸性飲料変敗菌Alicyclobacillus acidoterrestrisの耐熱性とその制御" 食科工誌. 44・12. 905-911 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Murakami: "Thermal reistance of Alicyclobacillus acidoterrestris spores in different buffers and pH" Food Microbiol.15・6. 577-582 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] B.Kimura: "Evaluation of TaqMan^<TM> PCR Assay for Detecting Salmonella in Raw Meat and Shrimp" J.Food Prot.62・3印刷中. (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] K.Yamazaki et al.: "Specific primers for detection of Alicyclobacillus acidoterrestris by RT-PCR" Lett.Appl.Microbiol.23. 350-354 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Satomi et al.: "Tetragenococcus muriaticus sp.nov., a new moderately halophilic lactic acid bacterium isolated from fermented squid liver sause" Int.J.Syst.Bacteriol.47-3. 832-836 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] K.Yamazaki et al.: "Ampified polymorphic DNA (RAPD) for rapid detection of spoilage bacterium, Alicyclobacillus acidoterrestris" Biosci.Biotech.Biochem.61-6. 1016-1018 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] K.Yamazaki et al.: "Thermal resistance and prevention of spoilage bacterium, Alicyclobacillus acidoterrestris, in acidic beverage" Nippon Shokuhin Kagaku Kougaku Kaishi. 44-12. 905-911 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Murakami et al.: "Thermal resistance of Alicyclobacillus acidoterrestris spores in different buffers ad pH" Food Microbiol.15-6. 577-582 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] B.Kimura et al.: "Evaluation of TaqMan PCR assay for detecting Salmonella in raw meat and shrimp" J.Food.Prot. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] K.Yamazaki: "Amplified Polymorphic DNA(RAPD) for Rapid Identification of Spoilage Bacterium,Alicyclobacillus acidoterrestris." Biosci.Biotech.Biochem.61・6. 1016-1018 (1997)

    • Related Report
      1998 Annual Research Report
  • [Publications] 山崎浩司: "酸性飲料変敗菌 Alicyclobacillus acidoterrestrisの耐熱性とその制御" 食科工誌. 44・12. 905-911 (1997)

    • Related Report
      1998 Annual Research Report
  • [Publications] M.Murakami: "Alicyclobacillus acidoterrestris Spores in Different Thermal Resistance of Buffers and pH" Food Microbiol.15・6. 577-582 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] B.kimura: "Evaluation of TaqMan^<TM> PCR Assay for Detecting Salmonella in Raw Mcat and Shrimp" J.Food Prot.62・3(印刷中). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] K.Yamazaki: "Specificprimers for detection of Alicyclobacillus acidoterrestris by RT-PCR" Letters in Applied Microbilogy. 23. 350-354 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] K.Yamazaki: "Randomly amplified polymorphic DNA (RAPD) for rapid idontification of spoilage bacterium,Alicyclobacillus acidoterrestris" Biosci.Biotech.Biochem.(印刷中). (1997)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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