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Molecular Evolution of Cell Compartment Specific Genes

Research Project

Project/Area Number 08640787
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 遺伝
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

IWABE Naoyuki  Kyoto University, Graduate School of Science, Assistant Professor, 大学院・理学研究科, 助手 (80263060)

Project Period (FY) 1996 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 1997: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 1996: ¥900,000 (Direct Cost: ¥900,000)
Keywordsmolecular evolution / cell compartment / molecular phylogenetic tree / Giardia / rab / ADP-ribosylation factor / kinesin / ion pump / イオンポンプ
Research Abstract

To know a possible relationship between organismal and molecular evolution, the divergence pattern of genes was examined based on a phylogenetic analysis of the GTP binding protein(GTPase)superfamily, the kinesin heavy chain family, and ion pump family by taking special notice of intracellular localization of these proteins. To obtain a rough estimate of times when these genes diverged by gene duplication, the cDNAs were cloned and sequenced from Giardia, a primitive protists lacking mitochondria as well as endoplasmic reticulum and Golgi apparatus, and we found that the major groups of members belonging to kinesin heavy chain, rab, and ADP-ribosylation factor families diverged by gene duplication before the separation of Giardia and other eukaryotes. A similar divergence pattern was also found in the calcium ion pump family. These results strongly suggest that most of gene duplications that gave rise to diverse genes with different intracellular localization have been completed in the very early evolution of eukaryotes. These results also suggest the secondary loss of endoplasmic reticulum and Golgi apparatus in Giardia lineage.

Report

(3 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • Research Products

    (9 results)

All Other

All Publications (9 results)

  • [Publications] Iwabe, N.et al.: "Evolution of Gene Families and Relationship with Organismal Evolution : Rapid Divergence of Tissue-Specific Genes in the Early Evolution of Chordates." Molecular Biology and Evolution. 13(3). 483-493 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Nikoh, N.et al.: "An estimate of divergence time of Parazoa and Eumetazoa and that of Cephalochordata and Vertebrata by aldolase and triose phosphate isomerase clocks." J.Mol.Evol.45(1). 97-106 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Suga, H.et al.: "Intermittent divergence of the protein tyrosine kinase family during animal evolution." FEBS Lett.412(3). 540-546 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Iwabe, N., et al.: "Evolution of gene families and relationship with organismal evolution : rapid divergence of tissue-specific genes in the early evolution of chordates." Mol.Biol.Evol.13(3). 483-493 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Nikoh, N., et al.: "An estimate of divergence time of Parazoa and Eumetazoa and that of Cephalo-chordata and Vertebrata by aldolase and triose phosphate isomerase clocks." J.Mol.Evol.45. 97-106 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Suga, H.et al.: "Intermittent sivergence of the protein tyrosine kinase family during animal evolution." FEBS Lett.412. 540-546 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Suga H.et al.: "Intermittent divergence of the protein tyrosine kinase family during animal evolution." FEBS Lett.412(3). 540-546 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Nikoh N.et al.: "An estimate of divergence time of Parazoa and Eumetazoa and that of Cephalochordata and Vertebrata by aldolase and triose phosphate isomerase clocks." J.Mol.Evol.45(1). 97-106 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Iwabe,N.et al.: "Evolution of Gene Families and Relationship with Organismal Evolution:Rapid Divergence of Tissue-Specific Genes in the Early Evolution of Chordates." Molecular Biology and Evolution. 13(3). 483-493 (1996)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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