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Inttra-and interspecific genetic exchanges in Japanese small mammals through the Quaternary environmental fluctuations

Research Project

Project/Area Number 08640791
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 遺伝
Research InstitutionHOKKAIDO UNIVERSITY

Principal Investigator

SUZUKI Hitoshi  Grad.School of Environ.Earth Sci., Hokkaido Univ., Asso.Prof., 大学院・地球環境科学研究科, 助教授 (40179239)

Project Period (FY) 1996 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1998: ¥400,000 (Direct Cost: ¥400,000)
Fiscal Year 1997: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 1996: ¥1,000,000 (Direct Cost: ¥1,000,000)
KeywordsMolecular phylogeny / Small mammals / Endemic species / DNA marker / Japanese islands / Genetic diversity / Genetic endemism / Biodiversity / 右来種 / 第四紀
Research Abstract

The fauna of Japanese small mammals is thought to be complex because frequent migration events might have occurred during the last several million years from three different routes through Sakhalin, the Korean Peninsula, and Taiwan. The fauna is also complex because Japan is long in a south to north direction and potentially has many geographic borders. To understand the organization of Japanese small rodents, we examined intra- and interspecific genetic variation in Japanese small mammals, such as dormice, murine and voles, from three geographic domains of Hokkaido, Honshu-Shikoku-Kyushu and Ryukyu Islands, using nucleotide sequences for the mitochondrial cytochrome b and nuclear IRBP genes and compared them with those of species collected from the Asian continent, Genetic divergence indicated that Japanese small rodents possess relatively high species endemism, especially in the Honshu and Ryukyu domains. Levels of genetic variation differ among species from the same geographic domains : however, suggesting a complex evolutionary history that is species-specific. High levels of genetic diversity were observed among geographic populations of Glirulus japonicus, Eothenomys andersoni, Apodemus speciosus. and Tokudaia osimensis as well as between Japanese and continental populations of Clethrionomys rufocanus and C.rutilus. These data imply that the Japanese islands had played and important roll in increasing the levels of genetic and species diversity in East Asia. Moreover, considering the molecular phylogenies and distribution patterns, it is probable that frequent interspecific and interpopulational genetic exchanges have taken place during the course of speciation in many small mammalian species.

Report

(4 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • 1996 Annual Research Report
  • Research Products

    (34 results)

All Other

All Publications (34 results)

  • [Publications] Hitoshi Suzuki: "Rat 5S rDNA spacer sequences and chromosomal assighnment of the genes to the extreme terminal region of chromosome 19" Cytogenet.Cell Genet.72. 1-4 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Hitoshi Suzuki: "Variation in ribosomal DNA and mitochondrial DNA among chromosomal species of subterranean mole rats." Mol.Biol.Evol.13. 85-92 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Shigeharu Wakana: "Phylogenetic implications of variations in rDNA and mtDNA in red-backed volles collected in Hokkaido, Japan, and in Korea." Mammal Study. 21. 15-25 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Hitoshi Suzuki: "Phylogenetic position and geographic differentiation of the Japanese dormouse, Glirulus japonicus, revealed by variations among rDNA, mtDNA and Sry gene" Zoological Science. 14. 167-173 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Han,Sang Hoon: "Variation of the mitochondrial DNA and the nuclear ribosomal DNA in the striped field mouse Apodemus agrarius on the mainland and off shore islands of South Korea" Mammal Study. 21. 125-136 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kikkawa, Y.: "Analysis of genetic diversity of domestic water buffaloes and anoas based on variations in the mitochondrial gene for cytochrome b." Animal Genetics. 28. 195-201 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Munechika, I.: "Differentiation of Restriction Sites in ribosomal DNA in the genus Gallus." Animal Science and Technology. 68. 1103-1110 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Munechika, I.: "Comparative analysis of the restriction endonuclease clearage patterns of mitochondria DNA in the genus Gallus." Japanese Poultry Science. 34. 184-188 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Chelomina, G.: "Sequencing of the mtDNA cytochrome b gene and reconstruction of the maternal relationships of wood and field mice of the genus Apodemus (Murldae, Rodentia)" Russian J.Genetics. 34(5). 529-539 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Suzuki, H.: "Molecular phylogeny of red-backed voles in Far East Asia based on variation in ribosomal and mitochondrial DNA." J.Mammalogy. 80. 512-521 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Hosoda, T: "Genetic relationships within and between the Japanese marten Martes melampus and the sable M. zibellina, based on variation of mitochondrial DNA and nuclear ribosomal DNA" Mammal Study.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Suzuki H,Sakurai S,Matsuda Y.: "Rat 5S rDNA spacer sequences and chromosomal assignment of the genes to the extreme terminal region of chromosome 19" Cytogenet Cell Genet. 72. 1-4 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Suzuki H,Wakana S,Yonekawa H,Moriwaki K,Sakurai S,Nevo E.: "Variations in ribosomal DNA and mitochondrial DNA among chromosomal species of subterranean mole rats" Mol Biol Evol. 13. 85-92 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Wakana S,Sakaizumi M,Tsuchiya K,Asakawa M,Han S-H,Nakata K,Suzuki H: "Phylogenetic implications of variations in rDNA and mtDNA in red-backed voles collected in Hokkaido, Japan, and in Korea" Mammal Study. 21. 15-25 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Suzuki, H., Minato, S., Sakurai, S., Tsuchiya, K., Fokin, M.: "Phylogenetic position and geographic differentiation of the Japanese doemouse, Glirulus japonicus, revealed by variations among rDNA,mtDNA and the Sry gene." Zool.Sci.14. 167-173 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Han, S-H., Wakana, S., Suzuki, H., Hirai, Y., Tsuchiya, K.: "Variation of the mitochondrial DNA and the nuclear ribosomal DNA in the striped field mouse Apodemus agrarius on the mianland and offshore islands of South Korea." Mammal Study. 21. 125-136 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kikkawa, Y., Yonekawa, H., Suzuki, H., and Amano, T.: "Analysis of genetic diversity of domestic water buffaloes and anoas based on variations int ehmitochondrial gene for cytochrome b." Animal Genetics. 28. 195-201 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Munechika, I., Wakana, S., and Suzuki, H.: "Differentiation of restriction sites in ribosomal DNA in the genus Gallus." Animal Sci Tech. 68. 1103-1109 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Munechika, I., Suzuki, H., and Wakana, S.: "Comparative analysis of the restriction endonuclease cleavage patterns of mitochondrial DNA in the genus Gallus." Jpn Poultry Sci. 34. 184-188 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Chelomina, G.N., Suzuki, H., Tsuchiya, K., Moriwaki, K., Lyapunova, E.A., and Vorontsov, N.N.: "Sequencing of the mtDNA cytochrome b gene and reconstruction of the maternal relationships of wood and field mice of the genus Apodemus (Muridae, Rodentia)." Russian J.Genetics. 34. 529-539 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Suzuki, H., Iwasa, M., Harada, M., Wakana, S., Sakaizumi, M., Han, S-H., Kitahara, E., Kimura, Y., Kartavtseva, I., Tsuchiya, K.: "Molecular phylogeny of red-backed voles in Far East Asia based on variation in ribosornal and mitochondrial DNA." J.Mammalogy. 80. 512-521 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Hosoda, T., Suzuki, H., Iwasa, M.A., Hayashida, M., Watanabe, S., Tatara, M., and Tsuchiya, K.: "Genetic relationships within and between the Japanese marten Martes melampus and the sable M.zibellina, based on variation of mitochondrial DNA and nuclear ribosomal DNA." Mammal Study. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Chelomina,G.: "Sequencing of the ntDNA cytochrome b gene and reconstruction of the maternal relationships of wood and field mice of the genus Apodemus (Moridae Rodentia)" Russian J.Genetics. 34(5). 529-539 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Suzuki,H.: "Molecular Phylogeny of red-backed voles in Far East Asia based on variation in ribosomal and mitochondrial DNA." J.Mammalogy. 80. 512-521 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Hosoda,T.: "Genetic relationships within and between the Japanese marten Martes melanpus and the sable M.zibellina,based on variation of mitchondrial DNA and nuclear ribosomal DNA." Mammal Study. (印刷中).

    • Related Report
      1998 Annual Research Report
  • [Publications] Hitoshi Suzuki: "Phylogenetic position and geographic differentiation of the Japanese dormouse,Glirulus japonicus,revealed by variations among,DNA,mcDNA and Srygene." Zoological Science. 14. 167-173 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Han,Sang Houn: "Variation of the mitochondrial DNA and the nuclear ribusomel DNA in the striped field mouse Apudomus agrarius on the mainlana and of shore islands of South Korea" Mammal Study. 21. 125-136 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kikkawa,Y.: "Analysis of genetic diversity of domestic water buffaloes and anods based on variations in the mitochondrial gene for cytochrome b." Animal Genetics. 28. 195-201 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Munechika,I: "Differentiation of Restriction Sites in ribosomal DNA in the genus Gallus." Animal Science and Technology. 68. 1103-1110 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Munechika,I: "Comparative aralysis of the restriction endonuclease clearage patterns of mitochondrial DNA in the genus Gallus" Japanese Poultry Science. 34. 184-188 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Hitoshi Suzuki: "Rat 5S rDNA spacer sequences and chromosomal assighnment of the genes to the extreme terminal region of chromosome 19" Cgtogenet. Cell Gemet. 72. 1-4 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Hitoshi Suzuki: "Voriation in ribosomal DNA and mitochondrial DNA among chromosomal species of subterranean mole rats" Mol. Biol. Evol.13. 85-92 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Shigehal Wakana: "Phylogenetic implications of variations in rDNA and mtDNA in red-backed volles collected in Hokkaido,Japan,and in Korea" Mammal Study. 21. 15-25 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Hitoshi Suzuki: "Phylogenetic position and geographic difterentiation of the Japanese dormouse,Glirulus japonicus,revealed by rariations among rDNA,mtDNA and the Sry gene" Zoological Science. 14(in press). (1997)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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