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Localization of proteins in yeast by immuno-electron microscopy

Research Project

Project/Area Number 08660097
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionThe University of Tokyo

Principal Investigator

HIRATA Aiko  The University of Tokyo, Institute of molecular and Cellular Biosciences, Instructor, 分子細胞生物学研究所, 助手 (30092307)

Project Period (FY) 1996 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1998: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 1997: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 1996: ¥900,000 (Direct Cost: ¥900,000)
Keywordsimmno-electron microscopy / ultrastructure / budding yeast (S accharomyces cerevisiae) / secretory pathway / ER (endoplasmic reticulum) / heterologous protein / membrane protein / 酵母 / 分裂酵母 / 液胞
Research Abstract

Yeasts have been studied as a model system of eukaryotic cell for the genetic analysis, but regarded not promising for ultrastucture studies. Recently rapid freezing and substitution method has improved greatly the fixation not only of ultrastructure of yeast cell but also of immunoactvity of the proteins, which enabled to localize the proteins relative to the ultrastucture.
We compared the results studied by immuno-electron microscopy using different substitution methods to localize the proteins with respect to the ultrastucture in the yeast Saccharomyces cerevisiae.
(1) Cells were rapidly fixed into liquid propane cooled with liquid nitrogen and substituted with 4%O_sO4/acetone (-80゚C) and embedded in Spurr's resin. Sections were treated with anti aspartic proteinase antibody and then with colloidal gold-conjugated anti-rabbit IgG antibody. The material was Saccharomyces cerevisiae in which heterologous prosequence-deleted derivative of an aspartic proteinase from a filamentous fungus … More Rhizopus niveus was expressed. Immuno-electron microscopical analysis revealed that the DELTApro aggregates were indeed visible as electron-dense regions in the ER and nuclear envelope.
(2) Cells were substituted with ethanol after rapid frozen and polymerized in LR White resin. Sections were treated with anti-myc antibody and then with colloidal gold-conjugated anti-mouse IgG antibody. We isolated mutants defective in glycosylation of the outer chain to investigate glycosylation mechanism in the Golgi . Vanadate-resistant and immature glycosylation mutants belonged to nine complementation groups. One of them was VRG4 which encoded a Golgi GDP-mannose transporter (a transmembrane protein). The material was S.cerevisiae in which the myc-tagged Vrg4 protein was overproduced. These results showed that the Golgi and ER membranes proliferated. Some of these membranes showed the stacked structures like in mammalian cells. At the same time, immunogold labeling revealed that the overproduced Vrg4-myc proteins localized in such proliferated membrane structures.
In both studies, cells were showed a good preservation of ultrastructure and immno activity of proteins. Less

Report

(4 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • 1996 Annual Research Report
  • Research Products

    (46 results)

All Other

All Publications (46 results)

  • [Publications] Takashi Ueda: "Characterization and subcellular localization of a small GTP-binding protein(Ara-)from Arabidopsis:conditional expression under control of the promoter of the gene for heat-shock protein HSP81-1" Mol.Gen.Gent.250.5. 533-539 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tomoko Yamanushi: "Characterization of yeast sarl temperature-sensitive mutants,which are defective in protein transport from the endoplasmic reticulum" J.Biochem.120.2. 452-458 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Takashi Ueda: "Brefeldin A induces the accumulation of unusual membrane structures in elongating pollen tube of Nicotiana tabacum L" J.Plant physiol.149.6. 683-689 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Shigeaki Saitoh: "Aberrant mitosis in fission yeast mutants defective in fatty acid synthetase and acetyl Co A carboxylase" J.Cell Biol.134.4. 949-961 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 平田 愛子: "電子顕微鏡でみる世界" AD&S. 2.1. 28-32 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Norihiro Nakamura: "Vam2/Vps41p and Vam6/Vps39p are components of a protein complex on the vacuolar membranes and involved in the vacuolar assembly in the yeast Saccharomyces cerevisiae" J.Biol.Chem.272.17. 11344-11349 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Yoh Wada: "Vam3p,a new member of syntaxin related protein,is required for vacuolar assembly in the yeast Saccharomyces cerevisiae" J.Cell.Sci.110.11. 1299-1306 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Wellyzar Sjamsuridzal: "Evolutionary relationships of members of the genera Taphrina,Protomyces,Schizosaccharomyces,and related taxa within the archiascomycetes:Integrated analysis of genotypic and phenotypic characters" Mycoscience. 38. 267-280 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kyohei Umebayashi: "Accumulation of misfolded protein aggregates leads to the formation of Russell body-like dilated endoplasmic reticulum in yeast" Yeast. 13.11. 1009-1020 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Junta Sugiyama: "Divergence and molecular evolution among Basidiomycetous yeasts int e tropical and subtropical genus Graphiola" Progress in Microbial Ecology,Martins,M.T.et alii(eds). 173-180 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Eiko Morita: "Presence of the CO_2-concentrating mechanism in some species of the pyrenoid-less free-living algal genus Chloromonas(Volvocales,Chlorophyta)" Planta,. 204.2. 269-276 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Teruo Kuroda: "Patch clamp studies on ion pumps of the cytoplasmic membrane of Escherichia coli:Formation,preparation,and utilization of giant vacuole-like structures consisting of everted cytoplasmic membrane" J.Biol.Chem.273.27. 16897-16904 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Yoshihito Uchino: "Reclassification of marine Agrobacterium species:Proposals of Stappia stellulata gen.nov.,Comb.nov.,Stappia aggregata sp.nov.,nom.rev.,Ruegeria atlantica gen.nov.,comb.nov.,Ruegeria gelatinovora comb.nov.,Ruegeria algicola comb.nov.,and Ahrensia kieliense gen.nov.,sp.nov.,nom.rev." J.Gen.Appl.Microbiol.44.3. 201-210 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Muyuki Sato: "The yeast RER2 gene,identified by endoplasmic reticulum protein localization mutations,encodes cis-prenyltransferase,a key enzyme in dolichol synthesis" Mol.Cell.Biol.19.1. 471-483 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tsuyoshi Takewaka: "Null mutation in IRE1 gene inhibits overproduction of microsomal cytochrome P450AlKl(CYP52A3)and proliferation of the endoplasmic reticulum in Saccharomyces cerevisiae" J.Biochem.(in press). (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Takashi Ueda: "Characterization and subcellular localization of a small GTP-binding protein (Ara-4) from Arabidopsis conditional expression under control of the promoter of the gene for heat-shock protein HSP81-1" Mol.Gen.Genet.250-5. 533-539 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tomoko Yamanushi: "Characterization of yeast sar1 temperature-5 ensitive mutants, which are defectivein protein transport from the endoplasmic reticulum" J.Biochem.120-2. 452-458 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Takashi Ueda: "Brefeldin A induces the accumulation of unusual membrane structures in elongating pollen tube of Nicotiana tabacum L" J.Plant physiol.149-6. 683-689 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Shigeaki Saitoh: "Aberrant mitosis in fission yeast mutants defective in fatty acid synthetase and acetlyl Co A carboxylase" J.Cell Biol.134-4. 949-961 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Aiko Hirata: "The world of ultrastructure by electron microscopy (in Japanese)" AD&S. 2-1. 28-32 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Norihiro Nakamura: "Vam2/Vps41p and Vam6/Vps39p are components of a protein complex on the vacuolar membranes and involvedin the vacuolar assembly in the yeast Saccharomyces cerevisiae" J.Biol.Chem.272-17. 11344-11349 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Yoh Wada: "Vam3p, a new member of syntaxin related protein, is required for vacuolar assembly in the yeast Saccharomyces cerevisiae" J.Cell Sci.110-11. 1299-1306 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Wellyzar Sjamsuridzal: "Evolutionary relationships of members of the genera Taphrina, Protomyces, Schizosaccharomyces, and related taxa within the" Mycoscience. 38. 267-280 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kyohei Umebayashi: "Accumulation of misfolded protein aggregates leads to the formation of Russell body-like dilated endoplasmic reticulum in yeast" Yeast. 13-11. 1009-1020 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Junta Sugiyama: "Divergence and molecular evolution among Basidiomycetous yeasts int e tropical and subtropical genus Graphiola" Progress in Microbial Ecology, Martins, M.T.et al. (eds). 173-180 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Eiko Morita: "Presence of the CO_2-concentrating mechanisum in some species of the pyrenoid-less free-living algal genus Chloromonas (Voivocales, Chlorophyta)" Plata. 204-2. 269-276 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Teruo Kuroda: "Patch clamp studies on ion pumps of the cytoplasmic membrane of Escherichia coli : Formation, preparation, and utilization of giant vacuole-like structures consisting of everted cytopiasmic membrane" J.Biol.Chem. 273-27. 16897-16904 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Yoshihito Uchino: "Reclassification of marine Agrobacterium species : Proposals of Stappia stellulata gen.nov., comb.nov., Stappia aggregata sp.nov., nom.rev., Ruegeria atlantica gen.nov., comb.nov., Ruegeria gelatinovora comb.nov., Kuegeria algicola comb.nov., and Ahrensia kieliaise gen.nov., sp.nov., nom.rev." J.Gen.Appl.Microbiol.44-3. 201-210 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Miyuki Sato: "The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis" Mol.Cell.Biol.19-1. 471-483 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tsuyoshi Takewaka: "Null mutation in IRE1 gene inhibits overproduction of microsomal cytochrome P450A1k1 (CYP52A3) and proliferation of the endoplasmic reticulum in Saccharomyces cerevisiae" J.Biochem.(in press). (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Eiko Morita: "Presence of the CO_2-concentrating mechanism in some species of the pyrenoid-less free-living algal genus Chloromonas (Volvocales,Chlorophyis)" Planta,. 204・2. 269-276 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Teruo Kuroda: "Patch clamp studies on ion pumps of the cytoplasmic membrane of Escherichia coli:Formation,preparation,and utilization of giant vacuole-like structures consisting of everted cytoplasmic membrane" J.Biol.Chem.273・27. 16897-16904 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Yoshihito Uchino: "Reclassification of marine Agrobacterium species:Proposals of Stoppia stellulata gen.nov.,comb,nov.,Stoppia aggregata sp.nov.,nom.rev.,Ruegeria atlorrica gen.nov.,comb.nov.,Ruegeria gelatinovora comb.nov.,Ruegeria algicola comb.nov.,and Ahrensia kieliense gen.nov.,sp.nov.,nom.rev." J.Gen.Appl.Microbiol.44・3. 201-210 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Muyuki Sato: "The yeast RER2 gene,identified by endoplasmic reticulum protein localization mutations,encodes cis-prenyltransferase,a key enzyme in dolichol synthesis" Mol.Cell.Biol.19・1. 471-483 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Tsuyoshi Takewaka: "Null mutation in IRE1 gene inhibits overproduction of microsomal cytochrome P450Alkl (CYP52A3) and proliferation of the endoplasmic reticulum in Saccharomyees cerevisiae" J.Biochem.(in press). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Norihiro Nakamura: "Vam2/Vps41p and Vam6/Vps39p are components of a protein complex on the vacuolar membranes and involved in the vacuolar assembly in the yeast Saccharomyces cerevisiae" J.Biol.Chem.,. 272.17. 11344-11349 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Yoh Wada: "Vam3p,a new member of syntaxin related protein,is required for vacuolar assembly in the yeast Saccharomyces cerevisiae" J.Cell Sci.,. 110.11. 1299-1306 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Wellyzar Sjamsuridzal: "Evolutionary relationships of members of the genera Taphrina,Protomyces,Schizosacccharomyces,and related taxa within the archiascomycetes:Integrated analysis of genotypic and phenotypic characters" Mycoscience,. 38. 267-280 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kyohei Umebayashi: "Accumulation of misfolded protein aggregates leads to the formation of Russell body-like dilated endoplasmic reticulum in yeast" Yeast. 13.11. 1009-1020 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Junta Sugiyama: "Divergence and molecular evolution among Basidiomycetous yeasts int e tropical and subtropical genus Graphiola" Progress in Microbial Ecology,Martins,M.T.et alii(eds). 173-180 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Eiko Morita: "Presence of the CO_2-concentrating mechanism in some species of the pyrenoid-less free-living algal genus Chloromonas(Volvocales,Chlorophyta)" Planta,. (in press). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Takeshi Ueda: "Characterization and subcellular localization of a small GTP-binding protein(Ara-4)from Arabidopsis:conditional expression under control of the promoter of the gene for heat-shock protein HSP81-1" Mol.Gen.Genet.,. 250・5. 533-539 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Tomoko Yamanushi: "Characterization of yeast sar1 temperature-sensitive mutants, which are defective in protein transport from the endoplasmic reticulum" J.Biochem.,. 120・2. 452-458 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Takashi UdaA: "Brefeldin A induces the accumulation of unusual membrane structures in elongating pollen tube of Nicotiana tabacum L" J.Plant Physiol.,. 149.6. 683-689 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Shigeaki Saitoh: "Aberrant mitosis in fission yeast mutants defective in fatty acid synthetase and acetyl Co A carboxylase" J.Cell Biol.,. 134.4. 949-961 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 平田 愛子: "電子顕微鏡でみる世界" AD&S. 2.1. 28-32 (1996)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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