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Functional analysis of genes for polyketide synthase

Research Project

Project/Area Number 08680635
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioorganic chemistry
Research InstitutionSchool of Pharmaceutical Sciences, Kitasato University

Principal Investigator

IKEDA Haruo  Kitasato University, Pharmaceutical Sciences, Associate Professor, 薬学部, 助教授 (90159632)

Project Period (FY) 1996 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥2,500,000 (Direct Cost: ¥2,500,000)
Fiscal Year 1997: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1996: ¥1,100,000 (Direct Cost: ¥1,100,000)
KeywordsAvermectin / Biosynthesis / Biosynthetic genes / Polyketide / Polyketide synthase / 生合成工学 / エバ-メクソン
Research Abstract

Avermectins are a series of 16-membered macrocyclic lactones produced by Streptomyces avermitilis. They are pentacyclic polyketide-derived compounds linked to a disaccharide of the methylated deoxysugar. Within the 90 kbp gene cluster for avermectin biosynthesis, the central 65 kbp segment was found to be required for aglycone biosynthesis (it is performed by catalytic reactions of polyketide synthase ; PKS) by phenotypic analysis of strains containing deletion or insertion mutations in this region. The avermectin PKS genes are organized into two convergently transcribed clusters. The biosynthesis of avermectin aglycone requires twelve acyl condensations of short-chain fatty acids. To elucidate the biosynthetic mechanism of the formation of the aglycone moiety, we determined DNA sequence of the half of this region (aveAI).A sequence analysis of this region within the gene cluster for avermectin biosynthesis indicated that the segment encodes two ORFs, the avermectin polyketide synthases (PKS). From the results of sequencing analysis, a feature of this region, aveAI,is that it encodes two large multifunctional polypeptides containing domains possessing putative fatty acid synthase (FAS)-like activities. PKS-1 and PKS-2 are composed with two and four repeats of FAS-like functions, respectively. The DNA encoding each repeated unit is called a module or synthase unit (SU) which catalyzes a round of acyl condensation and modification of beta-carbon. Although almost each domain in SUs were similar to each other, acyltransferase domains (AT) cluster into two group. Avermectin is composed of with malonate and methylmalonate building blocks. One of the groups contains only the proposed malonate loading functions and the other contains methylmalonate loading function.

Report

(3 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • Research Products

    (8 results)

All Other

All Publications (8 results)

  • [Publications] H.Ikeda & S.Omura: "Avermectin Biosynthesis" Chemical Reviews. 97. 2591-2609 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Ikeda et.al: "Cloning of the gene encoding avermectin B 5-0methyltransferase in avermec tin - producing Streptomyces aoerintilis" Gene. 206. 175-180 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Ikeda & S.Omura: "Avermectin Biosynthesis" Chemical Reviews. 97. 2591-2609 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] H.Ikeda et.al.: "Cloning of the gene encoding avermectin B 5-O-methyltransferase in avermectin-producing Streptomyces avermitilis" Gene. 206. 175-180 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] 池田治生・大村智: "微生物2次代謝産物生合成の機能的改変による有用物質の生産" 化学と生物. 34. 761-771 (1996)

    • Related Report
      1997 Annual Research Report
  • [Publications] 池田治生・大村智: "Avermectin Biosynthesis" Chemical Reviews. 97. 2591-2609 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 池田治生ら: "Cloning of the gene encoding B5-O-methyltrawferase in avermectin-producing" Gene. 206. 175-180 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] 池田治生・大村智: "微生物2次代謝産物生合成の機能的改変による有用物質の生産" 化学と生物. 34. 761-771 (1996)

    • Related Report
      1996 Annual Research Report

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Published: 1996-04-01   Modified: 2016-04-21  

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