• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

identity determination mechanism of leucine tRNA

Research Project

Project/Area Number 08680734
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionHirosaki University

Principal Investigator

HIMENO Hyouta  Hirosaki University, Faculty of Agriculture and Life Science, Associate Professor, 農学生命科学部, 助教授 (80208785)

Project Period (FY) 1996 – 1997
Project Status Completed (Fiscal Year 1997)
Budget Amount *help
¥2,500,000 (Direct Cost: ¥2,500,000)
Fiscal Year 1997: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1996: ¥1,700,000 (Direct Cost: ¥1,700,000)
KeywordstRNA / tRNA^<Leu> / leucine / leucyl-tRNA systhetase / tRNA identity / variable arm / class II tRNA / Saccharomyces cerevisiae / ロイシル-tRNa 合成酵素 / tRNAのアイデンティティー
Research Abstract

The recognition of tRNA^<Leu>, one of the class IItRNAs having a long variable arm, by leucyl-tRNA synthetase in Saccharomyces cerevisiae was studied using the T7 transcription system. Exchanging the anticodon arm of tRNA^<Leu> but not the D-or TYC-arm to that of tRNA^<Ser> seriously affected the leucine accepting activity. Two nucleotides in the anticodon loop, A35 and G37, were foung to be important for leucylation. It was also found that the discriminator base, A37, is required for leucylation, and G37 of tRNA^<Ser> function as a negative identity determinant for leucyl-tRNA synthetase. Introducing a set of three base substitutions at 35,37 and 73 was sufficient to convert tRNA^<Ser> into an efficient leucine acceptor. These results indicate that the identity elements of tRNA^<Leu> lie at the second position of the anticodon and the 3' adjacent to the anticodon as well as the discriminator position. Such a sequence spedific recognition manner is significantly different from that of … More Escherichia coli, in which not the anticodon but the tertiaty structural elements play a key role in discriminating from other class II tRNAs. The leucine system is the first example which shows that the requirement of the anticodon sequence is variable among species.
It was also found the unilateral aminoacylation specificity between Escherichia coli and Yeast Saccharomyces cerevisiae. Both SerRS and LeuRS from E.coli were unable to aminoacylate yeast class II tRNAs, in contrast, the yeast counterparts were able to aminoacylate E.coli class II tRNAs. Yeast SerRS was able to aminoacylate not only E.coli tRNA^<Ser> but also tRNA^<Leu> and tRNA^<Tyr>, and yeast LeuRS was able to aminoacylate not only E.coli tRNA^<Leu> but also tRNA^<Tyr>. These results indicate that the recognition style of class II tRNA is significantly divergent between E.coli and yeast, and also that the discrimination against noncognate tRNAs in yeastis less exclusive than that in E.coli. This difference is considered to be attributed considerably to the different composition of the class II tRNAs between E.coli and yeast. Less

Report

(3 results)
  • 1997 Annual Research Report   Final Research Report Summary
  • 1996 Annual Research Report
  • Research Products

    (25 results)

All Other

All Publications (25 results)

  • [Publications] Feldeu, B.: "Probing the strncture of the E.coli 10SaRNA(tmRNA)." RNA. 3. 89-103 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Himeno, H.: "In vitro trans transtation mediated by alanine・charged 10SaRNA." J.Mol.Biol.268. 803-808 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Himeno, H.: "Only one nudeotide insertion to the long variable arm coufers anefficieutserineacceptoractirity upcn Saccharomyces cerevisiae cRNA^<Leu> in vitro." J.Mol.Biol.268. 704-711 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Himono, H.: "Escherichia coli tmRNA(10SaRNA)in trans-translation." Nucleic Acids Symp.Ser.37. 185-186 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Soma, A.: "Recognition system of class II tRNA in Escherichia coli and yeast." Nucleic Acids Symp.Ser.37. 295-296 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Muto, A.: "A bacterial RNA that functions as both a tRNA and an mRNA in trans-translation." Trends Biochem.Sci.23. 25-29 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Felden, B., Himeno, H., Muto, A., McCutcheon, J., Atkins, J.F., Gesteland, R.F.: "Probing the structure of the E.coli 10Sa RNA (tmRNA)." RNA3. 89-103 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Himeno, H., Sato, M., Tadaki, T., Fukushima, M., Ushida, C., Muto, A.: "In vitro trans translation mediated by alanine-charged 10Sa RNA." J.Mol.Biol.268. 803-808 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Himeno, H., Yoshida, S., A.and Nishikawa, K.: "Only one nucleotide insertion to the long variable arm confers an efficient serine acceptor activity upon Saccharomyces cerevisiae tRNA^<Leu> in vitro." J.Mol.Biol.268. 704-711 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Himeno, H., Nameki, N., Tadaki, T., Sato, M., Hanawa, K., Fukushima, M., Ishii M., Ushida, C.and Muto, A.: "Escherichia coli tmRNA (10Sa RNA) in trans-translation." Nucleic Acids Symp.Ser.37. 185-186 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Soma, A.and Himeno, H.: "Recognition system of class II tRNA in Escherichia coli and yeast." Nucleic Acids Symp.Ser.37. 295-296 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Muto, A., Ushida, C.and Himeno, H.: "A bacterial RNA that functions as both a tRNA and an mRNA." Trends Biochem.Sci.23. 25-29 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1997 Final Research Report Summary
  • [Publications] Feldeu,B.: "Probing the structure of the E.coli 10Sa RNA(tmRNA)." RNA. 3. 89-103 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Himeno,H.: "In vitro trans transtation mediated by alanine-charged 10Sa RNA." J.Mol.Biol.268. 803-808 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Himeno,H.: "Onlyone nudeotide insetion to the long variable arm confers anefficieut serineacceptor activity upon Saccharomyces ceretisial tRNA^<Leu> in vitro." J.Mol.Biol.268. 704-711 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Himeno,H.: "Escherichia coli tmRNA(10SaRNA)in trans-translation." Nucleic Acids Symp.Ser.37. 185-186 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Somo,A.: "Recognition system of class II tRNA in Escherichia coli and yeast." Nucleic Acids Symp.Ser.37. 295-296 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Muto,A.: "A bacterial RNA that functions as both a tRNA and an mRNA in trans-trainslation." Trends Biochem.Sci.23. 25-29 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] 姫野 俵太: "生化学" 日本生化学会, 5 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Soma,A.: "The anticodon loop io amajor identity determinant of Saccharomyces cerevisiae tRNA^<Leu>." J. Mol. Biol.263. 707-714 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Muto,A.: "Structure and function of bacterial 10 SaRNA : trans-translation system." Biochimie. (in press).

    • Related Report
      1996 Annual Research Report
  • [Publications] Feldeu,B.: "Structural orgamization of Esdierichia coli tmRNA." Biochimie. (in press).

    • Related Report
      1996 Annual Research Report
  • [Publications] Feldeu,B.: "Probing the structure of the E. coli 10 SaRNA(tmRNA)." RNA. 3. 89-103 (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Tadaki,T.: "Interaction of 10SaRNA with ribosomes in Escherichia coli." FEBS Lett.399. 223-226 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Himeno,H.: "Invitro trans translation mediated by alanine-charged 10 SaRNA." J. Mol. Bicl.(in press).

    • Related Report
      1996 Annual Research Report

URL: 

Published: 1996-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi