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CELL-FREE BIOSYNTHESIS SYSTEM OF NOVEL ANTIBODIES

Research Project

Project/Area Number 09044119
Research Category

Grant-in-Aid for international Scientific Research

Allocation TypeSingle-year Grants
SectionJoint Research
Research Field Molecular biology
Research InstitutionTOHOKU UNIVERSITY

Principal Investigator

KUMAGAI Izumi  TOHOKU UNIVERSITY,PROFESSOR, 大学院・工学研究科, 教授 (10161689)

Co-Investigator(Kenkyū-buntansha) VOLKER Erdma  ベルリン自由大学, 生物化学研究所, 教授
ERDMANN Volker A.  FREIE UNIVERSITAT BERLINE,PROFESSOR
ERDMANN Volk  ベルリン自由大学, 生物化学研究所, 教授
Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥5,700,000 (Direct Cost: ¥5,700,000)
Fiscal Year 1998: ¥2,500,000 (Direct Cost: ¥2,500,000)
Fiscal Year 1997: ¥3,200,000 (Direct Cost: ¥3,200,000)
KeywordsANTIBODY / CELL-FREE BIOSYNTHESIS SYSTEM / MOLECULAR RECOGNITION / GENETIC ENGINEERING / ANTIGEN SPECIFICITY / PROTEIN ENGINEERING / EVOLUTIONARY ENGINEERING / 高原特異性 / 一本鎖抗体
Research Abstract

Single-chain antibodies (scFv), which can be produced in Escherichia coli cells, have been shown in numerous cases to be active in antigen binding. In the case of the two anti-lysozyme single-chain antibodies, scFvLH and scFvHL, which have the reversed arrangement of the variable domains of the heavy and light chains of the corresponding monoclonal antibodies, the expression level differs greatly when they are produced in Escherichia coli [Tsumoto et al. (1995) Biochem. Biophys. Res. Commun. 201, 546-551]. Although the expression level of scFvLH is high in vivo, the single chain antibody with the reversed orientation (scFvHL) was synthesized in a very low yield and no active product could be obtained. In this study, we constructed the synthesis system of these two anti-lysozyme single-chain antibodies in high yields and with high biological activities in a cell-free E.coli expression system in the presence of reduced and oxidized glutathione, protein disulfide isomerase (PDI), and chap … More erones. In immunological blotting assays, the synthesized scFvs with both arrangements exhibit specific binding activity to the corresponding antigens, hen egg-white lysozyme, and in an activity assay both inhibited the action of lysozyme. scFvLH is synthesized mainly as a product with the expected molecular weight, whereas scFvHL is produced with additional shorter fragments, suggesting that the low yield isolation through the expression in vivo is due to mistranslation or ribonucleolytic cleavage of the transcript, In the cell-free expression of scFv a certain amount of the product is precipitated but in the presence of chaperones the amount of soluble protein increased from 25 to 90% (PDI and chaperones). The overall expression level and the specific biological activity, however, were hardly influenced. The system reported here can provide significant amounts of various scFv fragments regardless of the order of variable regions, including those which are hardly expressed in vivo. Based on the cell-free synthesis system, the expression of ribosomal protein 57 fused with HyHEL10 scFv LH was attempted, and the technical basis for molecular evolution of proteins has been constructed. Less

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (64 results)

All Other

All Publications (64 results)

  • [Publications] Tsumoto et al.: "Novel selection method for engineered antibodies using the mechanism of FV fragment stabilization in the presence of antigen" Protein Engineering. 10. 1311-1318 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Furuta et al.: "Construction of mono-and bi-valent human single-chain Fv fragments against the O-antigen in the Rh blood group" Protein Engineering. 11. 233-241 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tsumoto et al.: "Highly efficient recovery of functional single-chain for fragment from inclusion bodies overexpressed in E col: by controlled・・・・・" Journal of Immunological Methods. 219. 119-120 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Koshiba et al.: "Thermal study of mutant human lysozymes with partially introduced Cu^<2+> binding sites by using efficient refolding system" Protein Engineering. 11. 583-590 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Chaudhuri et al.: "Effect of the extra N-terminal methionire residue on the stability and folding of recombinant α-lactalbumis in E,coli" Journal of Molecular Biology. 285. 1179-1199 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Merk et al.: "Cell-free expression of two single-chain monoclonal antibodies against lysozyme" Journal of Biochemistry. 125. 328-331 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 前仲ら: "Structural analysis of mutant hen egg-white lysozyme prefering a minor binding mode" Biochin. Biophys. Acta. 1384. 23-31 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kitamura et al.: "Cloning and expression of the gene encoding flavodoxin from Desulfovibrio valgaris (Miyazaki F)" Journal of Biochemistry. 123. 891-898 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Maenaka et al.: "Disclosure of another carbohydrate binding site in hen egg-white lysozyme by conversion of subsite B stmcture" Biochemical Journal. 331. 71-76 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Hori et al.: "Substrate Recognitim of tRNA(Guanosine-2′-)-methyltransferase from Thermus thermophilus HB 27" Journal of Biological Chemistry. 273. 25721-25727 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tanaka et al.: "Pl-Specificity of Aqualysin I (a Subtilisin-type Serine Protease) from Thermus aquaticus YT-1, using Pl-Substituted Deriratives of SSI" Biosci. Biotechnol. Biochem.62. 2035-2038 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Sakurai et al.: "SEA-scFv as bifunctional antibody." Biochemical Biophysical Research Communication. 印刷中. (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Suzuki et al.: "Open sandwich ELISA with VH-NL-alkaline phosphatase fusion proteins" Journal of Immunological Methods. 印刷中. (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kitamura et al.: "Expression of a Model Peptide of a Marine Mussel Adhesive Protein in E.coli." Journal of Polymer Science, A, Polymer Chemistry. 印刷中. (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 熊谷,津本: "生体外選択系による新機能抗体分子の創製" 蛋白質核酸酵素. 43. 159-167 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 熊谷,津本,前仲: "ファージ提示系による抗体工学" 日本生物物理学会誌. 213. 1219-1222 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 上田ら: "新たな免疫測定法" 遺伝子医学. 3. 170-175 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 熊谷, 津本, 前仲: "構造生物学(共著)" 朝倉出版, 13 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 熊谷, 津本: "遺伝子工学(分子遺伝学 共著)" 丸善出版社, 25 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 三沢, 熊谷: "医薬品開発を目指したプロテインエンジニアリングの現状(共著)" CMC 出版, 8 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 熊谷, 津本: "抗体工学(天然高分子研究の新展開,共著)" CMC 出版, 12 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Helmut Merk, Wolfgang Stiege, Kouhei Tsumoto, Izumi Kumagai, and Volker A.Erdmann: "Cell-free expression of two single-chain monoclonal antibodies against lysozyme-Effect of domain arrangement on the expression-" J.Biochem.125. 328-333 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kouhei Tsumoto, Yoshiyuki Nishimiya, Hiroshi Ueda, Teruyuki Nagamune, Kyoko Ogasahara, Katsuhide Yutani, Kenji Tokuhisa, Masaaki Matsushima and Izumi Kumagai: "Novel selection method for engineered antibodies using the mechanism of Fv fragment stabilization in the presence of antigen" Protein Engineering. 10. 1311-1318 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masaru Furuta, Makoto Uchikawa, Yoshitaka Ueda, Toshio Yabe, Tetsuya Taima, Kouhei Tsumoto, Shusei Kojima, Takeo Juji and Izumi Kumagai: "Construction of mono- and bi- valent human single-chain Fv fragments against the D-antigen in the Rh blood group : Multimerization effect on cell agglutionation and application to blood typing" Protein Engineering. 11. 233-241 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kouhei Tsumoto, Katsutoshi Shinoki, Hidemasa Kondo, Makoto Uchikawa, Takeo Juji, and Izumi Kumagai: "High efficient recovery of functional single-chain Fv fragment from inclusion bodies overexpressed in E.coli by controlled introduction of oxidizing reagent---Its application to a human single-chain Fv---" J.Immunol.Methods. 219. 119-129 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Chikako Suzuki, Hiroshi Ueda, Kouhei Tsumoto, Walt C.Mahoney, Izumi Kumagai, and Teruyuki Nagamune: "Open Sandwich ELISA with VH-/VL-alkaline phosphatase fusion proteins" J.Immunol.Methods. (in press). (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Naoki Sakurai, Toshio Kudo, Masanori Suzuki, Kouhei Tsumoto, Shinichi Takemura, Hideaki Kodama, Shinji Ebara, Atsushi Teramae, Yu Katayose, Masao Shinoda, Tadashi Kuroki, Yuji Hinoda, Kohzoh Imai, Seiki Matsuno, and Izumi Kumagai: "SEA-scFv as bifunctional antibody : construction of the bacterial expression system and its functional analysis" Biochem.Biophys.Res.Commun.(in press). (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Hiroshi Ueda, Masahiro Kawahara, Kouhei Tsumoto, Kazuo Tadokoro, Eiji Suzuki, Hajime Nishimura, Paula A.Schueler, Greg Winter, Walt Mahoney, Izumi Kumagai, and Teruyuki Nagamune: "Controlling cell growth by monovalent antigen" J.Mol.Biol.(in press). (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masaya Kitamura, Yuichi Koshino, Yoshitaka Kamikawa, Kyoko Kohono, Shuichi Kojima, Kin-ichiro Miura, Takamasa Sagara, Hideo Akutsu, Izumi Kumagai, and Tadao Nakaya: "Cloning and expression of the Rubredoxin gene from Desulfovibrio vulgaris (Miyazaki F) -Comparison of the primary structure of desulfoferrodoxin-" Biochim.Biophys.Acta. 1351. 239-247 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masaya Kitamura, Takamasa Sagara, Masahiro Taniguchi, Masaki Ashida, Kaori Ezoe, Kyoko Kohono, Shuichi Kojima, Kiyoshi Ozawa, Hideo Akutsu, Izumi Kumagai, and Tadao Nakaya: "Cloning and Expression of the Gene Encoding Flavodoxin from Desulfovibrio vulgaris (Miyazaki F)" J.Biochem.123. 891-898 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Katsumi Maenaka, Masaki Matsushima, Kimitsuna Watanabe, and Izumi Kumagai: "Structural analysis of mutant hen egg-white lysozyme prefering a minor binding mode." Biochim.Biophys.Acta. 1384. 23-31 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Katsumi Maenaka, Masaki Matsushima, Gota Kawai, Akinori Kidera, Kimitsuna Watanabe, Ryota Kuroki and Izumi Kumagai: "Disclosure of another carbohydrate binding site in hen egg-white lysozyme by conversion of subsite B structure" Biochem, J.331. 71-76 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Takumi Koshiba, Kouhei Tsumoto, Kazuo Masaki, Keiichi Kawano, Katsutoshi Nitta, and Izumi Kumagai: "Thermal study of mutant human lysozymes with partially introduced Ca ^<2+> binding sites by using efficient refolding system from inclusion bodies" Protein Engineering. 11. 583-590 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] H.Hori, S.Nakanishi, K.Nishikawa, T.Ueda, I.Kumagai, K.Watanabe: "Substrate Recognition of tRNA (Guanosine-2'-) -methyltransferase from Thermus thermophilus HB27" J.Biol.Chem.273. 25721-25727 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Terumichi Tanaka, Hiroshi Matsuzawa, Shuichi Kojima, Izumi Kumagai, Kin-ichiro Miura, and Takahisa Ohta: "P1-Specificity of Aqualysin I (a Subtilisin-type Serine Protease) from Thermus aquaticus YT-1, using P1-Substituted Derivatives of Streptomyces Subtilisin Inhibitor." Biosci.Biotechnol.Biochem.62. 2035-2038 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Chaudhuri, Tapan K., Katsunori Horii, Takao Yoda, Munehito Arai, Shunzi Nagata, Tokoki P.Terada, Hidefumi Uchiyama, Teikichi Ikura, Kouhei Tsumoto, Hiroshi Kataoka, Masaaki Matsushima, Kunihiro Kuwajima, Izumi Kumagai: "Effect of the extra N-terminal methionine residue on the stability and folding of recombinant alpha-lactabumin expressed in Escherichia coli" J.Mol.Biol.(in press). (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masaya Kitamura, Kiminori Kawakami, Naotoshi Nakamura, Kouhei Tsumoto, Hidefumi Uchiyama, Yoshitaka Ueda, Izumi Kumagai, and Tadao Nakaya: "Expression of a Model Peptide of a Marine Mussel Adhesive Protein in Escherichia coli and Characterization of its Structural and Functional Properties" J.Polymer Sci, A,Polymer Chemstry. (in press). (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Izumi Kumagai and Kouhei Tsumoto: "Antigen-antibody binding" Encyclopedia of life sciences. (in press). (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tsumoto et al.: "Novel selection method for engineered antibodies using the mechanism of Fv fragment stabilization in the presense of antigen" Protein Engineering. 10. 1311-1318 (1997)

    • Related Report
      1998 Annual Research Report
  • [Publications] Furuta et al.: "Construction of mono- and bi-valent human single-chain Fv fragments aginst the O-antigen in the Rh blood group" Protein Engineering. 11. 233-241 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Tsumoto et al.: "Highly efficient recovery of functional single-chain Fv fragment from inclusion bodies overexpressed in E coli by controlled ・・・・・・" Journal of Immunological Methods. 219. 119-12〓 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Koshiba et al.: "Thermal study of mutant human lysozymes with partially introduced Ca binding sites by using efficient refolding system" Protein Engineering. 11. 583-590 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Chaudhuri et al.: "Effect of the extra N-terminal methionine vesidue on the stability and folding of recombinant α-lactalabumin in E,Coli" Journal of Molecular Biology. 285. 1179-1199 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Merk et al.: "Cell-free expression of two single-chain monoclonal antibodies against lysozyme" Journal of Biochemistry. 125. 328-331 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] 前仲ら: "Structural analysis of mutant hen egg-white lysozyme prefering a minor binding mode" Biochim.Biophys.Acta. 1384. 23-31 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kitamura et al.: "Cloning and expression of the gene encoding flavodorin from Desulfovibrio valgan's (Miyazaki F)" Journal of Biochemistry. 123. 891-898 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Maenaka et al.: "Disclosure of another carbohydrate binding site in hen egg-white lysozyme by conversion of subsite B structure" Biochemical Journal. 331. 71-76 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Hori et al.: "Substrate Recognition of tRNA(Guanosine-2'-)-methyltransferase from Thermus thermophilus HB27" Journal of Biological Chemistry. 273. 25721-25727 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Tanaka et al.: "PI-Specificity of Agualysin I(a Subtilisin-type Serine Protease)from Thermus aquatiocus YT-C using PI-Substituted Derivatives of SSI" Biosci.Biotechnol.Biochem.62. 2035-2038 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Sakurai et al.: "SEA-scFv as bifunctional antibody." Biochemical Biophysical Research Communication. (印刷中). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Suzuki et al.: "Open sandwich ELISA with VH-/VL-alkaline phosphatase fusion proteins" Journal of Immunological Methods. (印刷中). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kitamura et al.: "Expression of a Model Peptide of a Marine Mussel Adhesive Protein in Ecoli." Journal of Polymer Science,A,Polymer Chemistry. (印刷中). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] 熊谷、津本: "生体外選択系による新機能抗体分子の創製" 蛋白質 核酸 酵素. 43. 159-167 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 熊谷、津本、前仲: "ファージ提示系による抗体工学" 日本生物物理学会誌. 213. 1219-222 (1997)

    • Related Report
      1998 Annual Research Report
  • [Publications] 上田ら: "新たな免疫測定法" 遺伝子医学. 3. 170-175 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] 熊谷、津本、前仲: "構造生物学(共著)" 朝倉出版, 13 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 熊谷、津本: "遺伝子工学(分子遺伝学 共著)" 丸善出版社, 25 (1997)

    • Related Report
      1998 Annual Research Report
  • [Publications] 三沢、熊谷: "医薬品開発を目指したプロテインエンジニアリングの現状(共著)" CMC出版, 8 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 熊谷、津本: "抗体工学(天然高分子研究の新展開、共著)" CMC出版, 12 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] K. Tsumoto: "Novel selection method for engineered antibodies using the mechanism of Fv fragment stabilization in the presence of antigen" Protein Engineering. 10. 1311-1318 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] K. Maenaka: "Disclosure of another carbohydrate binding site in hen egg-white lysozyme by conversion of subsite B structure" Biochem, J.印刷中. (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] K. Maenaka: "Structural analysis of mutant hen egg-white lysozyme prefering a minor binding mode" Biochim, Biophys, Acta. 印刷中. (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] M. Kitamura: "Cloning and expression of the Rubredoxin gene from Desulfovibrio vulgaris (Miyazaki F) -Comparison of the primary structure of desulfoferrodoxin-" Biochim, Biophys, Acta. 1351. 239-247 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] M.Furuta: "Construction of mono-and bi-valent human single-chain Fv fragments against the D-antigen in the Rh blood group : Multimerization effect on cell agglutionation and application to blood typing" Protein Engineering. 11印刷中. (1998)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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