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Metabolic control of dissolved organic matter dynamics

Research Project

Project/Area Number 09044207
Research Category

Grant-in-Aid for international Scientific Research

Allocation TypeSingle-year Grants
SectionJoint Research
Research Field Environmental dynamic analysis
Research InstitutionThe University of Tokyo

Principal Investigator

NAGATA Toshi  Univ.Tokyo, Ocean Research Inst.Assoc.Professor, 海洋研究所, 助教授 (40183892)

Co-Investigator(Kenkyū-buntansha) KIRCHMAN David L.  Univ.Delaware, College of Marine Studies, Prof., 海洋学部, 教授
SUZUKI Satoru  Kochi Univ., Dept.of Agriculture, Assoc.Professor, 農学部, 助教授 (90196816)
OGAWA Hiroshi  Univ.Tokyo, Ocean Research Inst.Assist.Professor, 海洋研究所, 助手 (50260518)
KOGURE Kazuhiro  Univ.Tokyo, Ocean Research Inst.Assoc.Professor, 海洋研究所, 助教授 (10161895)
KOIKE Isao  Univ.Tokyo, Ocean Research Inst.Professor, 海洋研究所, 教授 (30107453)
BENNER R.  テキサス大学, 海洋科学部, 準教授
Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥10,100,000 (Direct Cost: ¥10,100,000)
Fiscal Year 1998: ¥4,100,000 (Direct Cost: ¥4,100,000)
Fiscal Year 1997: ¥6,000,000 (Direct Cost: ¥6,000,000)
KeywordsDissolved Organic Matter / Oceans / Dissolved protein / Ectoenzyme / Bacteria / Carbon cycle / Nitrogen cycle / Organic metter decompostion
Research Abstract

Although dissolved organic matter (DOM) represents the largest reservoir of organic carbon in seawater and plays critical roles in material cycling within the oceans, little is known about mechanisms by which DOM dynamics is controlled in seawater. In this project, we focused on interactions between DOM and microbes in marine environments and evaluated the factors that affect bacterial degradation of DOM.A novel approach was developed to determine the degradation rate constant of dissolved proteins (an important component of DOM) by using radiolabeled bacterial proteins and peptidoglycan. The newly developed method allowed us to follow microbial respiration (degradation) of proteins and other biopolymers in natural seawater. Results demonstrated that the proteins associated with other biopolymers such as phospholipid are much less easily degradable than the proteins freely dissolved. These results are consistent with recent findings that bacterial membrane proteins and cell wall material largely accumulate in oceanic waters and suggest that the steric protection of HMW-DOM is an important mechanism by which DOM accumulates in seawater. Our data have important implications for understanding DOM turnover and modeling DOM dynamics in the oceans.

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (12 results)

All Other

All Publications (12 results)

  • [Publications] T.Nagata: "Degradation by bacteria of membrane and soluble protein in sea-water" Aquatic Microbial Ecology. 14. 29-37 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] D.L.Kirchman(編): "Miccobial Ecology of the Oceans" John Wiley & Sons (印刷中),

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Brylinsky 他(編): "New Frontiers in Microbial Ecology" Atlantic Canada Society of Microbial Ecology (印刷中),

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T.Nagata: "Degradation by bacteria of membrane and soluble protein in seawater" Aquatic Microbial Ecology. 14. 29-37 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T.Nagata: "Production mechanisms of dissolved organic matter" D.L.Kirchman (ed.) Microbial Ecology of the Oceans.John Wiley & Sons. (In press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T.Nagata: "Bacterial mortality : a pathway for the formation of refractory DOM?" M.Brylinsky et al. (eds.) New Frontiers in Microbial Ecology.Atlantic Canada Society of Microbial Ecology. In press.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] D.L.Kirchman(編): "Microbial Ecology of the Oceans" John Wiley & Sons(印刷中),

    • Related Report
      1998 Annual Research Report
  • [Publications] M.Brylinsky 他(編): "New Frontiers in Microbial Ecology" Atlantic Canada Society of Microbial Ecology(印刷中),

    • Related Report
      1998 Annual Research Report
  • [Publications] Nagata, T.: "Degradaticn by bacteria of membrane and soluble protein in seawate" Aquatic Microbial Ecology. 印刷中. (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Nagatu, T.: "Roles of submicrom particles and colloids in food wers and biogeochemical fluxes within marine environments" Advances in Microbial Ecology. 15. 81-103 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 永田 俊: "海洋における微生物食物網の構造と機能" 日本生態学会誌. 47. 63-69 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 編者 N. Handa 他: "Dynamics and Characterization of Marine Organic Matter" Terra Scientific Publishing Sompany (印刷中), (1997)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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