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Transcription-coupled repair and its deficiency

Research Project

Project/Area Number 09044304
Research Category

Grant-in-Aid for international Scientific Research

Allocation TypeSingle-year Grants
SectionJoint Research
Research Field Molecular biology
Research InstitutionOsaka University

Principal Investigator

TANAKA Kiyoji  Osaka University, Institute for Molecular and Cellular Biology, Professor, 細菌生体工学センター, 教授 (80144450)

Co-Investigator(Kenkyū-buntansha) YASUI Akira  Tohoku University, Institute of Development, Aging and Cancer, Professor, 加齢医学研究所, 教授 (60191110)
BOHR V.A.  国立老化機構研究所, 分子遺伝学研究部, 部長
THOMALE J.  エッセン大学, 医学部, 主任研究員
HOEIJMAKERS ジェイ エイチ ジェ  エラスムス大学 医学部, 教授
HANAOKA Fumio  Osaka University, Institute for Molecular and Cellular Biology, Professor, 細菌生体工学センター, 教授 (50012670)
THOMALE Juergen  Essen University, School of Medicine, Senior Scietist
BOHR Vilhelm A.  National Institute of Health, National Institute on Aging, Chief
HOEIJMAKERS Jan H.J.  Erasmus University, Faculty of Medicine and Health Sciences, Professor
HANAWALT Phi  スタンフォード大学, 生物学教室, 教授
HOEIJMAKERS ヤン  エラスムス大学, 医学部, 教授
Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥6,300,000 (Direct Cost: ¥6,300,000)
Fiscal Year 1998: ¥2,900,000 (Direct Cost: ¥2,900,000)
Fiscal Year 1997: ¥3,400,000 (Direct Cost: ¥3,400,000)
KeywordsDNA repair / trascription / xeroderma pigmentosum / Cockayne syndrome / microinjection / ultraviolet light / skin cancer / gene targeting / 基本転写 / 突然変異 / アルキル化剤 / ノックアウトマウス / 免疫グロブリン
Research Abstract

Nucleotide excision repair (NER) removes a wide variety of lesions from the genome and is defective in the genetic disorders xeroderma pigmentosum (XP) and Cockayne syndrome (CS). Complementation studies revealed that 7 genes are involved in XP (XPA-XPG) and 2 in CS (CSA, CSB). There are two subpathways in NER : transcription-coupled (TC-)NER accomplishing efficient removal of lesions blocking transcription and the slower global genome (GG-)NER.(1) We recently discovered a novel 855-amino acid protein, XAB2 (XPA-binding protein 2), containing 18 tetratricopeptide repeats, by virtue of its ability to interact with XPA in yeast two hybrid system. Immunoprecipitation analysis demonstrated that XAB2 is associated with the TC-NER-specific proteins CSA, CSB and RNA polymerase II in vivo. Antibodies against XAB2 inhibited both TCR and transcription when microinjected into living fibroblasts. These results indicate that XAB2 is a novel component involved in TC-NER and transcription. (2) XPA- o … More r CSB-deflcient mice were generated. A very important discovery was made when XPA-deficient micethat develop normally was crossed with the CSB-deflcient mice to generate double knockout mice. The double knockout mice appear to exhibit very severe synergistic developmental impairment resulting in extremely early ceasing of developmenta and death 4-6 weeks after birth. These results indicate that CSB and XPA belong to the different epistatic groups and that DNA damage and transcriptional competance contribute to the process of aging. (3) To find out whether NER contributes to preferential removal of 06-EtGua from active genes (asobserved in mammary cells of the rat and thymus cells of the mouse) repair kinetics for this a dduct have been measured in DNA from different tissues of EtNU-exposed XPA +/- and XPA -/- mice. For tissue-specific global repair of 06-EtGua no significant differences were observed between XPA knock out and heterozygote mice. However, this lesion was removed 3-4 times faster from active genes than from total genomic DNA in liver and brain cells of XPA +/- animals. This preferential repair was not observed in the XPA knock out mice. These results indicate that 06-EtGua in the active gene is repaired by NER. Less

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (32 results)

All Other

All Publications (32 results)

  • [Publications] Nocentini, S., et al.: "DNA damage recognition by XPA protein promotes efficient recruitment of TFIIH." J.Biol.Chem.272. 22991-22994 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Takeuchi, S., et al.: "Strand specificity and absence of hotspots-for p53 mutations in UVB-induced skin tumors of XPA-deficient mice." Cancer Res.58. 641-646 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ikegami, T., et al.: "Solution structure of the DNA-and RPA-binding domain of the human repair factor XPA." Nature Structural Biology. 5. 701-706 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi, T., et al.: "Mutational analysis of a function of xeroderma pigmentosum group A (XPA) protein in strand specific DNA repair." Nucleic Acid Res.26. 4662-4668 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masutani, C., et al.: "Identification and characterization of XPC-binding domain of hHR23B." Mol.Cell.Biol.17. 6915-6923 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Sugasawa, K., et al.: "Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair," Mol.Cell. 2. 223-232 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Nocentini, S., Coin, F., Saijo, M., Tanaka, K., & Egly, J-M.: "DNA damage recognition by XPA protein promotes efficiet recruitment of THIIH." J.Biol.Chem.272. 22991-22994 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Takeuchi, S., Nakatsu, Y., Nakane, H., Murai, H., Hirota, S., Kitamura, Y., Okuyama, A., & Tanaka, K.: "Strand specificity and absence of hotspots for p53 mutations in UVB-induced skin tumors of XPA-deficient mice." Cancer Research. 58. 641-646 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Winter, D.B., Phung, Q.H., Umar, A., Baker, S.M., Tarone, R.E., Tanaka.K., Liskay, R.M., Kunkel, T.A., Bohr, V.A., & Gearhart, P.J.: "Altered spectra of hypermutation in antibodies from mice deficient for theDNA mismatch repair protein PMS2." Proc.Natl.Acad.Sci.USA.95. 6953-6958 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ikegami, T., Kuraoka, L., Saijo, M., Kodo, N., Y.Kyogoku, Morikawa, K., Tanaka, K., & Shirakawa, M.: "Solution structure of the DNA- and RPA-binding domain of the human repair factor XPA." Nature Structural Biology. 5. 701-706 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi, T., Takeuchi, S., Saijo, M., Nakatsu, Y., Morioka, H., Otsuka, E., Wakasugi, M., Nikaido, O., & Tanaka, K.: "Mutational analysis of a function of xeroderma pigmentosum group A (XPA) protein in strand specific DNA repair." Nucleic Acid Research. 26. 4662-4668 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masutani, C., Araki, M., Sugasawa, K., van der Spek, P.J., Yamada, A., Uchida, A., Maekawa, T., Bootsma, D., Hoejimakers, J.H.J., and Hanaoka, F.: "Identification and characterization of XPC-binding domain of hHR23B." Mol.Cell.Biol.17. 6915-6923 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Sugasawa, K., Ng, J.M.Y., Masutani, C., Maekawa, T., Uchida, A., vander Spek, P.J., Eker, A.P.M., Rademakers, S., Visser, C., Aboussekhra, A., Wood, R.D., Hanaoka, F., Bootsma, D., and Hoejimakers, J.H.J.: "Two human homologues of Rad23 are functionally interchangeable in complex formation and stimulation of XPC repair activity." Mol.Cell.Biol.17. 6924-6931 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Sugasawa, K., Ng, J.M.Y., Masutani, C., Iwai, S., van der Spek, P., Eker, A.P.M., Hanaoka, F., Bootsma, D., and Hoeijimakers, J.H.J.: "Xeroderma pigmentosum group C protein complex is the initiator of global gnome nucleotide excision repair." Mol.Cell. 2. 223-232 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] van der Horst, G.T.J., Muijtjes, M., Kobayashi, K.Takano, R., Kanno, S-1, Takao, M., de Wit, J., Verkerk, A., Eker, A.P.M., van Leenen, D., Buijs, R., Bootsma, D., Hoeijmakers, J.H.J., and Yasui, A.: "Mammalian blue-light receptor homologs CRY1 and CRY2 are essential for maintenance of the biological clock." Nature. (in press.).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] G.T.J.van der Horst, H.van Steeg, R.J.W.Berg, A.J.van Gool, J.de Wit, G.Weeda, H.Morreau, R.B.Beems, C.F.van Kreijl, F.R.de Gruijl, D.Bootsma & J.H.J.Hoeijmakers.: "Defective transcription-coupled repair in Cockayne syndrome B mice is associated with skin cancer predisposition." Cell. 89. 425-435 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] A.J.van Gool, G.T.J.van der Horst, E.Citterio & J.H.J.Hoeijmakers.: "Cockayne syndrome : defective repair of transcription?" EMBO J.16. 4155-4162 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] E.Citterio, S.Rademakers, G.T.J.van der Horst, A.J.van Gool, J.H.J.Hoeijmakers & W.Vermeuren.: "Biochemical and biological characterization of wild-type and ATP-ase-deficient Cockayne syndrome B repair protein." J.Biol.Chem.273. 11844-11851 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] J.de Boer, J.de Wit, H.van Steeg, R.J.W.Berg, H.Morreau, P.Visser, A.R.L.Lehmann, M.Duran, J.H.J.Hoeijmakers & G.Weeda.: "A mouse model for the basal transcription/DNA repair disorder trichothiodystrophy." Molecular Cell. 1. 981-990 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Hayashi, T., Takao, M., Tanaka, K., and Yasui, A.: "ERCCl mutations in UV-sensitive Chinese hamster ovary (CHO) cell lines." Mutat.Res.407. 269-276 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Takeuchi, S., et al.: "Strard specificity and absence of hotspots for p53 mutations in UVB-induced skin tumous of XPA-deficient mice." Cancer Research. 58. 641-646 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Ikegami, T., et al.: "Solution struction of the DNA-and RPA-binding domain of the human repair factor XPA." Nature Structural Biology. 5. 701-706 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Sugasawa, K., et al.: "Xeroderna pigmentosun grop C protein complex is the initia for of global genoms nucleotide excision repair." Molecular Cell. 2. 223-232 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Hwang, B.J., et al.: "Expression of the p48 xeroderma pigmentosum gene is p53-dependent and is involved in global genome repair" Proc.Natl.Acad.Sci.USA. 96. 424-428 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] de Bear, J., et al.: "A mouse model for the basal transcription/DNA repair syndrome trichothidystrophy" Molecular Cell. 1. 981-990 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Citterio, E., et al.: "Biochemical and biologica; characterization of wild-type and ATPose-deficiend Cookayne syndrome B repair protein" J.Biol.Chem.273. 11844-11851 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Takeuchi, S.: "Strand specificity and absence of hotspots for p53 mutations in UVB-induced skin tumors of XPA-deficient mice." Cancer Res.(1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Nocentini, S.: "DNA damage recognition by XPA protein promotes efficient recruitment of TFIIH." J.Biol.Chem.272. 22991-22994 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] A.J.van Gool: "The Cockayne syndrome B protein,involved in transcription-coupled repair resides in a RNA polymerase II containing complex." EMBOJ.16. 5955-5965 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] G.T.J.van der Horst: "Defective transcription-coupled repair in Cockayne syndrome B mice is associated with skin cancer predisposition." Cell. 89. 425-435 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Buschfort, C.: "DNA excision repair profiles of normal and leukemic human lymphocytes:Functional analysis at the single cell level." Cancer Res.57. 651-658 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Englbergs, J.: "Fast repair of O6-ethyl-,but not O6-methylguanine in transcribed genes prevents mutation of Ha-ras in rat mammary tumorigenesis in duced by ethyl- in place of methylnitrosourea." Proc.Natl.Acad.Sci.USA,. (in press).

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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