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Studies of structural fluctuations of complex systems by transient hole-burning

Research Project

Project/Area Number 09440118
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 固体物性Ⅰ(光物性・半導体・誘電体)
Research InstitutionNara Institute of Science and Technology (1998)
Osaka University (1997)

Principal Investigator

KUSHIDA Takashi  Nara Institute of Science and Technology, Graduate School of Materials Science, Professor, 物質創成科学研究科, 教授 (00013516)

Co-Investigator(Kenkyū-buntansha) KANEMATSU Yasuo  Osaka University, Graduate School of Science, Research Associate, 大学院・理学研究科, 助手 (00211855)
Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥7,200,000 (Direct Cost: ¥7,200,000)
Fiscal Year 1998: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 1997: ¥6,000,000 (Direct Cost: ¥6,000,000)
Keywordsconformational dynamics / hole-burning / complex systems / myoglobin / glass transition / 蛋白質
Research Abstract

The time-resolved spectral hole-burning spectroscopy we have developed is an excellent method that enables us directly to observe the equilibrium conformational fluctuations in various materials over wide temperature and time ranges. We have improved the temporal resolution of this method to 10 ns, and applied it to merbromin dye and zinc-substituted myoglobin in a water-glycerol mixture. It has been found that the time dependence of the barycenter of the hole is expressed by a stretched exponential function and that the correlation time of the fluctuation obeys the Vogel-Fulcher law over the 150-300 K temperature range. The time behavior is much more non-exponential and much weakly dependent on temperature in protein solutions compared with dye solutions. It has been directly demonstrated that the conformational dynamics of a protein molecule is strongly dependent on that of its surroundings, and the glass transition of the protein is governed by the freezing of the solvent. Whole the obtained results have been found to be explained well by a hierarchically constrained dynamics model. We have also compared the conformational dynamics between native-like and moltenglobule-like cytochrome c. Further, it has been shown that the spectral shapes of the Qx and Qy bands of myoglobin and cytochrome c, which are buried in the inhomogeneously broadened absorption bands, can be determined using polarization spectroscopy in addition to the time-resolved spectral hole-burning.

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (16 results)

All Other

All Publications (16 results)

  • [Publications] A.Kurita: "Slow fluctuation in chromophore-solvent systems observed by time-resolved transient hole-burning spectroscopy" Journal of Luminescence. 76-77. 295-298 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Y.Kanematsu: "Lattice Dynamics in Disordered Materials Probed through Optical Responses" Journal of Luminescence. 76-77. 632-635 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Y.Shibata: "Determination of Qx- and Qy-absorption bands of Zn-porphyrin derivatives-contained in proteins by hole-burning spectroscopy" Chemical Physics Letters. 284・1. 115-120 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Y.Shibata: "Real-time observation of conformational fluctuations in Zn-substituted myoglobin by time-resolved transient hole-burning spectrosopy" Biophysical Journal. 75・1. 521-527 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Y.Shibata: "Solvent effects on conformational dynamics of Zn-substituted myoglobin observed by time-resolved hole-burning spectroscopy" Biochemistry. 38・6. 1789-1801 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Y.Shibata: "Conformational fluctuation of native-like and molten globule-like cytochrome c observed by time-resolved hole-burning" Biochemistry. 38・6. 1802-1810 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] A.Kurota: "Slow fluctuation in chromophore-solvent systems observed by time-resolved transient hole-burning spectroscopy" Journal of Luminescence. 76-77. 295-298 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Kanematsu: "Lattice Dynamics in Disordered Materials Probed through Optical Responses" Journal of Luminescence. 76-77. 632-635 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Shibata: "Determination of Qx- and Qy-absorption bands of Zn-porphyrin derivatives contained in proteins by hole-burning spectroscopy" Chemical Physics Letters. 284・1. 115-120 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Shibata: "Real-time observation of conformational fluctuations in Zn-substituted myoglobin by time-resolved transient hole-burning spectrosopy" Biophysical Journal. 75・1. 521-527 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Shibata: "Solvent effects conformational dynamics of Zn-substituted myoglobin observed by time-resolved hole-burning spectroscopy" Biochemistry. 38・6. 1789-1801 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Shibata: "Conformational fluctuation of native-like and molten globule-like cytochrome c observed by time-resolved hole-burning" Biochemistry. 38・6. 1802-1810 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Shibata: "Temperature and Solvent Viscosity Dependence of Conformational Dynamics of Zn-substituted Myoglobin Observed by Nanosecond Time-resolved Transient Hole-burning Spectroscopy" Journal of Luminesconce. 72-74. 605-606 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] A.Kurita: "Slow Fluctuation in Chromophore-solvent Syetems Observed by Time-resolved Transient Hole-burning Spectroscopy" Journal of Luminescence. (印刷中). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Y.Shibata: "Determination of Qx-and Qy-absorption Bands of Zn-porphyrin Derivatives Contained in Proteins by Hole-burning Spectroscopy" Chemical Physics Letters. (印刷中). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Y.Shibata: "Real-time Observation of Conformational Fluctuations in Zn-substituted Myoglobin by Time-resolved Transient hole-burning Spectroscopy" Biophysical Journal. (印刷中). (1998)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2020-05-15  

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