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Isolation of the rice DL gene by positional cloning.

Research Project

Project/Area Number 09460002
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Breeding science
Research InstitutionThe University of Tokyo

Principal Investigator

HIRANO Hiroyuki  Grad. Sch. Agric. Life Sci., Univ. Tokyo, Assoc. Prof., 大学院・農学生命科学研究科, 助教授 (00192716)

Co-Investigator(Kenkyū-buntansha) NAGOTO Yasuo  Grad. Sch. Agric. Life Sci., Univ. Tokyo, Prof., 大学院・農学生命科学研究科, 教授 (10143413)
Project Period (FY) 1997 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥13,600,000 (Direct Cost: ¥13,600,000)
Fiscal Year 1999: ¥2,700,000 (Direct Cost: ¥2,700,000)
Fiscal Year 1998: ¥2,800,000 (Direct Cost: ¥2,800,000)
Fiscal Year 1997: ¥8,100,000 (Direct Cost: ¥8,100,000)
KeywordsDL gene / positional cloning / Flower development / Reproduction organ / midrib / rice (Oryza sativa) / Morphogenesis / carpel identity / ポジショナル クローニング / BACクローン / BAC クローン
Research Abstract

The drooping leaf (dl) in rice (Oryza sativa) mutant shows homeotic conversion of carpels into stamens and drooping leaf without midrib. To elucidate the molecular function of the DL gene and to understand mechanism underlying flower development in rice, we have tried to isolate the DL gene by positional cloning. First, the dl locus was mapped within the RFIJP markers and the BAC contig covering about 250kb was constructed. Then, using a mutant probably caused by chromosomal deletion, the region involving the dl locus was confined within 50kb. Finally, the DL gene was isolated in combination with transposon tagging using TOS17. Sequence and Southern blot analyses revealed that eight dl alleles have mutations, of which severity was associated with that of their phenotypes. Therefore, we concluded that we succeeded in the isolation of the DL gene. The DL gene encodes a novel class of transcription factor, which is not found in any ABC genes so far reported. These findings suggest that the flower development in rice is regulated by the mechanisms distinct from that in Arabidopsis and Antirrhinum.

Report

(4 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • 1997 Annual Research Report
  • Research Products

    (20 results)

All Other

All Publications (20 results)

  • [Publications] Kikuchi, K.: "Molecular analysis of the NAC gene family in rice."Mol. Gen. Genet.. 262. 1047-1051 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Hirano, H. -Y.: "Isolation of the DROOPING LEAF gene that regulates carpel development and snidrib formation in rice"Gamma Fild Symposia. 38(in press). (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Mikami, I.: "Altered tissue gpecifre expression of the w<@D2x@>D2 gene of the opague mutations in rice"Euphyfica. 105. 91-97 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Yamaguchi, T.: "BAC config encompassing the dl lous"Rice Genet. Newslett. 15. 158-160 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Hirano, H. -Y.: "A ssingle base change altered the regulation of the waxy gene at the post transcriptional level during the domestication of rice.."Mol. Biol. Evol.. 15. 978-987 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Hirano, H. -Y.: "Enhancement of stimulated Raman scattering in laser-induced plasma formation in solvent mixture w<@D2x@>D2 gene eypression and the accumufation of amylose in response to cool tempertures during seed dwele present in the rice."Plant Cell Physoil.. 39. 807-812 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kikuchi, K., M. Ueguchi-Tanaka, K. T. Yoshida, Y. Nagato, M. Matsusoka, and H.-Y. Hirano: "Molecular analysis of the NAC gene family in rice."MOL. Gen. Genet.. 262. 1047-1051 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Hirano, H.-Y. and T. Yamaguchi: "Isolation of the DPOOPING LEAF gene that regulates carpel development and midrib formation in rice."Gamma Field Symp.. 38 (in press). (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Mikami, I., M. Aikawa, H.-Y. Hirano, and Y. Sano: "Altered tissue-specific expression at the Wx gene of the opaque mutants in rice."Euphytica. 105. 91-97 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Yamaguchi, T., S. Kawasaki, Y. Nagato, and H.-Y. Hirano: "Construction of the BAC contig encompassing the dl locus."Rice Genet. Newslett. 15. 158-160 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Hirano, H.-Y., M. Eiguchi, and Y. Sano: "A single base change altered the regulation of the Waxy gene at the post-transcriptional level during domestication of rice."Mol. Biol. Evol.. 15. 978-987 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Hirano, H.-Y., and Y. Sano: "Enhancement of Wx gene expression and the accumulation of amylose in response to cool temperatures during seed development in rice."Plant Cell Physiol.. 39. 807-812 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kikuchi, K.: "Moleculor analysis of the NAC gene fsmily in rice"Mol. Gen : Genet. 262. 1047-1051 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Inukai, T.: "Analysis of intergenic recombination at wx in rice : correlation between the moleculor and genetic maps with in the locus"Genome. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Mikami, I.: "Altered tissue-specific expression of the Wx gene of the opaque mutants in rice"Euphytica. 105. 91-97 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Sakai, A.: "Amyloplast formation in cultured tobaccoIII : Determination of the timing of gene expression necessary for starch accumulation"Plant Cell Rep.. 18. 589-594 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Shao, C. X.: "Rice genes encoding the SBP domain protein, which is a new type of transcription factor controlling plant development"Rice Gent. Newslett.. (in press). (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Yamaguchi, T.: "Construction of the BAC conting encompassing the dl locus." Rice Genet.Newslett.15 (in press). (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kikuchi, K.: "Chromosomal location of the OsNAC gene." Rice Genet.Newslett.15 (in press). (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kikuchi, K.: "A rapid and easily-landling procedure for isolation of DNA from rice, Arabidopsis and tobacco." Plant Bio tech.15. 45-48 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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