• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

INTERACTION OF SRP/SRP-RECEPTOR SYSTEM AND SEC PROTEIN TRANSLOCATION PATHWAY IN Bacillus subtilis.

Research Project

Project/Area Number 09460043
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionUniversity of Tsukuba

Principal Investigator

YAMANE Kunio  UNIVERSITY OF TSUKUBA, INSTITUTE OF BIOLOGICAL SCIENCES, PROFESSOR., 生物科学系, 教授 (20013336)

Co-Investigator(Kenkyū-buntansha) NAKAMURA Kouji  UNIVERSITY OF TSUKUBA, INSTITUTE OF BIOLOGICAL SCIENCES, ASSISTANT PROFESSOR., 生物科学系, 講師 (40212097)
Project Period (FY) 1997 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥13,500,000 (Direct Cost: ¥13,500,000)
Fiscal Year 1999: ¥2,600,000 (Direct Cost: ¥2,600,000)
Fiscal Year 1998: ¥2,500,000 (Direct Cost: ¥2,500,000)
Fiscal Year 1997: ¥8,400,000 (Direct Cost: ¥8,400,000)
KeywordsBacillus subtilis / Protein secretion / SRP / Signal peptide / Ffh / SRP homologous / SecA / 枯草菌Bacillus subtilis / SPR 相同因子 / SRP / 分泌蛋白質 / SRP相同因子 / 蛋白質分泌機構 / 枯草菌 / 蛋白質分泌 / SRP受容体 / Sec蛋白質 / 蛋白質・蛋白質相互作用
Research Abstract

Bacillus subtilis secretes high levels of extracellular enzymes and generates a heat-resistant endospore under poor nutrient conditions.
To understand the protein secretion pathway of Bacillus subtilis, we analyzed the interaction of Ffh and SecA, as well as the passage of presecretory proteins from Ffh to SecA. Precursors of a-amylase and b-lactamase fusion proteins having signal peptide of B. subtilis alkaline protease (pAprE-BlaH6) or penicillin binding protein 5* (pPBP5*-BlaH6) accumulated in the absence of SecA or Ffh. This suggests that SRP- and Sec-protein secretion pathway co-operate to secret proteins in B. subtilis. The SRP of B. subtilis consists of scRNA, Ffh and HBsu. Ffh functions as a central protein for the recognition and targeting of presecretory proteins. Ffh binds to pAprE-BlaH6 and pPBP5*-BlaH6 in vitro, but not to their mature form. SecA also binds to both pAprE-BlaH6 and pPBP5*-BlaH6. SecA-precursor complex formation was enhanced 15 to 30 fold when the precursors and Ffh were initially incubated followed by SecA addition, but not vice versa. Moreover precursors that bind to Ffh transferred to SecA. Direct interaction of Ffh and SecA was shown by the ligand affinity blotting, 6xHis tag purification and immuno-electron microscopy. These results indicate that SecA and Ffh interact to from a single protein secretion pathway including other proteins. Proteome analysis of extracellular proteins using two-dimensional electrophoresis revealed that most secretory proteins are translocated into culture media and the interspace of the mother cell and prespore by the protein secretion pathway.

Report

(4 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • 1997 Annual Research Report
  • Research Products

    (52 results)

All Other

All Publications (52 results)

  • [Publications] Miyuki Kumano: "A 32-kb nucleotide sequence from the region of the lincomycin-resistance gene (22^O-25^O) of the Bacillus subtilis chromosome and identification of the site of the lin2 muctation"Microbiology. 143. 2775-2782 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] H.Tjalsma: "Bacillus subtilis containes four closely related type I signal peptidases with overlapping substrate specificities : Constitutive and temporally controlled expression of different sip genes"J. Biol. Chem.. 272. 25983-25992 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] H.Takamatsu: "Identification of a region required for binding to presecretory protein in Bacillus subtilis Ffh, a homologue of the 54-kDa subunit of mammalian signal recognition particle"Eur. J. Biochem.. 248. 575-582 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] F.Kunst: "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis"Nature. 390. 249-256 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K.Nakamura: "Multipuf function of SPR RNA in eubacteria"Seikagaku. 69. 192-196 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] S.Ishikawa: "Regulation and characterization of a newly deduced cell wall hydrolase gene (cwlJ) which affects the germination of Bacillus subtilis spores"J. Bacteriol.. 180. 1375-1380 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] A.Oguro: "Bacillus subtilis RNase III cleaves both 5'- and 3'-sites of the small cytoplasmic RNA precursor"J. Biol. Chem.. 273. 19542-19547 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K.Haga: "Analyses of the reaction mechanism based on the X-ray structure of acrbose complexes of wile-type and mutant cyclodextrin glucanotransferases from alkalophilic Bacillus sp.#1011"J. Appl. Glycosci. 45. 177-183 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K.Nakamura: "Depletion of Escherichia coli 4.5S RNA leads to an increase in the amount of protein elongation factor EF-G associated with ribosomes"Eur. J. Biochem.. 259. 543-550 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K.Bunai: "Enhancing effect of Bacillus subtilis Ffh, a homologue of SRP54 of mammalian signal peptide recognition particle, on the binding of SecA to presecretory proteins in vitro"J. Biochem.. 125. 151-159 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K.Nakamura: "Bicillus subtilis histone-like protein, HBsu, is an integral component of an SPR-like particle that can bind to the Alu-domain of small cytoplasmic RNA"J. Biol. Chem.. 274. 13569-13576 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T.Yamazaki: "Depletion of Bacillus subtilis histone-like protein, HBsu causes difective protein translocation and induces upregulation of small cytoplasmic RNA"Bioche. Biophys. Res. Commun.. 258. 211-214 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K.Yamane: "Membrane proteins : structure, function and expression control"Kyushuu University Press, and Karger Medical and Scientific Publishers. Fukuoka and London. 10 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Miyuki Kumano, Atsuo Tamakoshi, and Kunio Yamane: "A 32-kb nucleotide sequence from the region of the lincomycin-resistance gene (22ィイD1oィエD1 - 25ィイD1oィエD1) of the Bacillus subtilis chromosome and identification of the side of the lin2 m uctation."Microbiology. 143. 2775-2782 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Harold Tjalsma, M.A. Noback, Sierd Bron, Gerard Venema, Kunio Yamane, and Jan Maarten van Dijl.: "Bacillus subtilis contains four closely related type I signal peptidases with overlapping substrate specificities : Constitutive and temporally controlled expression of different sip genes."J. Biol. Chem.. 272. 25983-25992 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Hiromu Takamatsu, Keigo Bunai, Tomok Horinakan, Akihiro Oguro, Kouji Nakamura, Kazuhito Watabe, and Kunio Yamane: "Identification of a region required for binding to presecretory protein in Bacillus subtilis Ffh, a homologue of the 54-kDa subunit of mammalian signal recognition particle."Eur. J. Biochem.. 248. 575-582 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] F. Kunst, N. Ogasawara,----K. Yamane and others.: "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."Nature. 390. 249-256 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kouji Nakamura and Kunio Yamane: "Multipuf function of SRP RNA in eubacteria."Seikagaku. 69. 192-196 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kunio Yamane, Kouji Nakamura, Hiromu Takamatsu, Akihiro Oguro, Keigo Bunai, Yoshio Nakamura, and Hiroshi Kakeshita: "(1997) SRP-like particle and its receptor system of Bacillus subtilis : identification and characterization."In Membrane protein : Structure, Function and Expression Control. ed., by N. Iwasaki and K. Mihara . Kyushu University Press and Karger Medical and Scientific Publishers. Fukuoka and London.. 143-152 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Shu Ishikawa, Kunio Yamane and Junichi Sekiguchi: "Regulation and characterization of a newly deduced cell wall hydrolase gene (cwlJ) which affects the germination of Bacillus subtilis spores."J. Bacteriol. 180. 1375-1380 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Akihiro Oguro, Hiroshi Kakeshita, Kouji Nakamura, Kunio Yamane, Wei Wang, and David H. Bechhofer.: "Bacillus subtilis RNase III cleaves both 5'-and 3'-sites of the small cytoplasmic RNA precursor."J. Biol. Chem.. 273. 19542-19547 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Keiko Haga, Osamu Sakamoto, Noriyuki Isii, Kazuaki Harata and Kunio Yamane.: "Analysis of the reaction mechanism based on the X-ray structure of acrbose complexes of wile-type and mutant cyclodextrin glucanotransferases from alkalophilic Bacillus sp. #1011. (in Japanese. Abstract in English)"J. Appl. Glycosci.. 45. 177-183 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kouji Nakamura, Ysuyuki Fujii, Toshiya Shibata and Kunio Yamane.: "Depletion of Escherichia coli 4.5s RNA leads to an increase in the amount of protein elongation factor EF-G associated with ribosomes."Eur. J. Biochemistry. 259. 543-550 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Keigo Bunai, Kouhei Yamada, Kenji Hayashi, Kouji Nakamura and Kunio Yamane: "(1999) Enhancing effect of Bacillus subtilis Ffh, a homologue of SRP54 of mammalian signal peptide recognition particle, on the binding of SecA to presecretory proteins in vitro."J. Biochemistry. 125. 151-159 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kouji Nakamura, Shou-ichi Yahagi, Takeo Yamazaki and Kunio Yamane: "Bacillus subtilis histone-like protein, HBsu, is an integral component of an SRP-like particle that can bind to the Alu-domain of small cytoplasmic RNA."J. Biol. Chem.. 274. 13569-13576 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Takao Yamazaki, Shou-ichi Yahagi, Kouji Nakamura, and Kunio Yamane.: "Depletion of Bacillus subtilis histone-like protein, HBsu causes defective protein translocation and induces upregulation of small cytoplasmic RNA."Biochem. Biophys. Res. Communin.. 258. 211-214 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kouji Nakamura: "Depletion of Eacherichia coli 4.5S RNA leads to an increase in the amount of protein elong ation factor EF-Gassociated with ribosomes."Eur.J.Biochemistry. 259. 543-550 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Keigo Bunai: "Enhancing effect of Bacillus subtilis Ffh,a homelogue of SRP54 of mammalian aignal petide recognition particke,on the binding of SecA to presecretory proteins in vitro."J.Biochemistry. 125. 151-159 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kouji Nakamura: "Bacillus aubtilis histone-like protein,Hbsu,is an integral component of an SRP-like particle that can bind to the Alu-domain of amall cytoplasmic RNA."J.Biol.Chem.. 274. 13569-13576 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Takao Yamazaki: "Depletion of Bacillus subtilis histone-like protein,Hbsu causes defective protein translocation and induces uprequlation of amall cytoplasmic RNA."Biochem.Biophys.Res.Commun.. 258. 211-214 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Satoru Suzuma: "Analysis of binding affinity of Eacherichia coli 5.5S RNA to Ffh and EF-G."FEMS Microbiol.Lett.. 180. 271-277 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Isao Hirose: "Froteome analysis of Bacillus subtilis extracellular proteins : a two-dimensional protein electrophoretic study."Microbiology. 146. 65-75 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] N.Ishii: "Cryatal atructure of asparagine 233-replaced cyclodextrin qlucano-tranaferase from an alkalophilic Bacillus sp.#1011 determined at 1.9A resolution."J.Mol.Recog.. (in press). (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] N.Ishii: "Cryatal structure of alkalophilic As [araqine 233-replaced cyclodexrin glucanotransferase complexed with an inhibitor,acarbose,at 2.0 A resolution."J.Biochem.. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] 山根國男: "21世紀は生物の時代!?"科学と生物. 37. 353-353 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 小笠原直毅: "枯草菌ゲノムと遺伝子の特徴。"蛋白質核酸酵素. 44. 1449-1459 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 小倉光雄: "枯草菌におけるシグンル伝達、形質転換、蛋白質分泌。"蛋白質核酸酵素. 44. 1467-1474 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 山根邦男: "枯草菌におけるポストゲノム研究 : シャペロンと分泌蛋白質。"Chaperon News Letter,. 6巻、印刷中. (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kunio Yamane: "Proteome analysis of extracellular proteins of Bacillus subtilis using secA and ffh conditional mutants.In "Functional analysis of Bcterial genes : a practical manual.Ed by W.Schumann et al."John Wiley & Sons,Ltd.. (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Shu Ishikawa: "Regulation and characterization of a newly deduced cell wall hydrolase gene (cwlJ) which affects the germination of Bacillus subtilis apores." J.Bacteriol.180. 1375-1380 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Akihiro Oguro: "Bacillus subtilis RNase III cleaves both 5'-and 3'-sites of the small cytoplasmic RNA precursor." J.Biol.Chem.273. 19542-19547 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Keiko Haga: "Analyses of the reaction mechanism based on the X-ray structure of acrbose complexes of wile-type and mutant cyclodextrin glucanotransferases from alkalophilic Bacillus ap.#1011.(in Japanese.Abstract in English)" J.Appl.Glycosci.45. 177-183 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Keigo Bunai: "Enhancing effect of Bacillus subtilis Ffh,a homoloque of SRP54 of mamnalian signal peptide recognition particle, on the binding of SecA to presecretory proteins in vitro." J.Biochemistry.in press.(1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kouji Nakamura: "Depletion of Bacherichia coli 4.5S RNA leads to an increase in the amount of protein elongation factor EF-G associated with ribosomes." Eur.J.Biochemistry. 259. 543-550 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] 山根國男: "ヒト・ゲノム解析と微生物ゲノムの解析" 大阪医薬品協会会報. 589. 2-8 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Frank Kunst: "The complete qenome sequece of the Gram-positive bacterium Bacillus subtilis." Nature. 390. 249-256 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Harold Tjalsma: "Bacillus subtilis contians four closely related type I signal peptidases with overlapping substrate specificities." J.Biol.Chem.272. 25983-25992 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Hiromi Takamatsu: "Identification of region required for presecretory portein binding of Bacillus subtilis Ffh,a homologue of mammalian SRP54 protein." Eur.J.Biochem.248. 575-582 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Miyuki Kumano: "A 32 kb nucleotide sequence from the region of the lincomycin-resistance qene(22°-25°)of the Bacillus subtilis chromosome and identification of the site of the the lin-2 mutaion." Microbiology. 143. 2775-2782 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Shu Ishikawa: "Regulation and characterization of a newly deduced cell wall hydrolase qene(cwlJ)which affects the qermination of Bacillus subtilis spores." J.Bacteriol.(印刷中). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] 中村幸治: "真正最菌SRP RNAの多機能性" 生化学. 69. 192-196 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kunio Yamane: "SRP-lkie pariticle and its receptor system of Bacillus subtilis:Identifica-tion and Characterization. In Membrane proteins" Kyushu University Press/S.Karger AG, 10 (1997)

    • Related Report
      1997 Annual Research Report

URL: 

Published: 1997-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi