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Studies on the origin of the Japanese based on the analysis of MVR-PCR alleles in asian populations

Research Project

Project/Area Number 09470123
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionNagoya University

Principal Investigator

KATSUMATA Yoshinao  School of Medicine, Nagoya University, 医学部, 教授 (30109326)

Co-Investigator(Kenkyū-buntansha) UCHIHI Rieko  School of Medicine Assistant Professor, 医学部, 助手 (20223571)
YAMAMOTO Toshimichi  School of Medicine Associate Professor, 医学部, 助教授 (50260592)
Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥9,600,000 (Direct Cost: ¥9,600,000)
Fiscal Year 1998: ¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 1997: ¥6,000,000 (Direct Cost: ¥6,000,000)
KeywordsPopulation Genetics / Minisatellite / D7S21 / D1S8 / D16S309 / MVR-PCR / Origin of the Japanese
Research Abstract

Last year, we could obtain DNA specimens of 100 Chinese individuals, and investigated the allele frequencies of three polymorphic sites in DNA flanking D1S8 (MS32) and D7S21 (MS31A) loci. Haplotype frequencies in Chinese were compared with those in Japanese and Caucasians which had been already reported. Distribution of haplotypes in Chinese is not significantly different from that in Japanese, but significantly different from that in Caucasian. Allele-specific MVR-PCR based on the selective amplification of single allele from total genomic DNA using allele-specific PCR primers was then performed. Although MVR-PCR allele codes are highly polymorphic, the similarity of the internal structure can be analysed by dot matrix analysis. Furthermore, different alleles can have related flanking haplotypes, presumably due to sharing recent common ancestors. When groups of aligned MS32 alleles or MS31A alleles were made by dot matrix analysis, we have already shown that Caucasian, Aflican black and Japanese have strong tendency to form unique groups composed of mostly the same spieces. In this study, we found that Chinese alleles often had the same motif as that of Japanese alleles resulting in the groups consist of only Japanese and Chinese alleles. Thus, using MVR-PCR allele codes and flanking haplotypes, we could show that Chinese alleles were chosely related to Japanese alleles. Allele mapping of D16S309 (MS205) was also performed with Japanese DNA specimens. We can usually obtain MVR-PCR maps of whole alleles at this locus because the length of the most alleles is short. We found that Japanese had rather short alleles, and their internal structures were somewhat diffrenent from those of Caucasians. We also showed the usufullness of MVR-PCR mapping for paternity testings using practical cases.

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (9 results)

All Other

All Publications (9 results)

  • [Publications] Huang X-L: "Evaluation of the paternity probability on an application of minisatellite variant repeat mapping using polymerase chain reaction (MVR-PCR) to paternity testing." Legal Medicine. in press.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 陳 松: "中国人D7S21位点等位起因特昇MVR-PCR分析(1)-中国人D7S21位点5′端側翼DNA多型性-" Genetics (in Chinese). in press.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tamaki K: "The potential contribution of MVR-PCR to paternity probabilities in a case lacking a mother." J.Forensic Sciences. in press.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Huang X-L: "Evaluation of the paternity probability on an application of minisatellite variant repeat mapping using polymerase chain reaction (MVR-PCR) to paternity testing." Legal Medicine. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Chen S: "D7S21 allelic analysis using MVR-PCR method in the Chinese population. -DNA polymorphisms at 5' flanking region-" Genetics (in Chinese). (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Tamaki K: "The potential contribution of MVR-PCR to paternity probabilities in a case lacking a mother." Journal of Forensic Sciences. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Huang X-L: "Evaluation of the paternity probability on an application of minisatelite variant repeat mapping using polymerase chain reaction (MVR-PCR) to paternity testing." Legal Medicine. (in press).

    • Related Report
      1998 Annual Research Report
  • [Publications] 陳 松: "中国人D7S21位点等位起因得昇MVR-PCR分析(1)-中国人D7S21位点5'端側翼DNA多型性" Genetics(in Chinese). (in press).

    • Related Report
      1998 Annual Research Report
  • [Publications] Tamaki K: "The potential contribution of MVR-PCR to paternity probabilities in a case lacking a mother." J.Forensic Sciences. (in press).

    • Related Report
      1998 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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