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Topology Analysis of Drug Binding Sites on Serum Proteins using Photoaffinity Labeling Techniques

Research Project

Project/Area Number 09470505
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biological pharmacy
Research InstitutionKUMAMOTO UNIVERSITY

Principal Investigator

OTAGIRI Masaki  Fac. Pharm. Sci., KUMAMOTO UNIVERSITY, Prof., 薬学部, 教授 (80120145)

Co-Investigator(Kenkyū-buntansha) IMAI Teruko  Fac. Pharm. Sci., KUMAMOTO UNIVERSITY, Guest Prof., 薬学部, 客員教授 (70176478)
IMAMURA Yorishige  Fac. Pharm. Sci., KUMAMOTO UNIVERSITY, Assoc. Prof., 薬学部, 助教授 (30040314)
NAKAYAMA Hitoshi  Fac. Pharm. Sci., KUMAMOTO UNIVERSITY, Prof., 薬学部, 教授 (70088863)
Project Period (FY) 1997 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥11,200,000 (Direct Cost: ¥11,200,000)
Fiscal Year 1999: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1998: ¥3,200,000 (Direct Cost: ¥3,200,000)
Fiscal Year 1997: ¥6,000,000 (Direct Cost: ¥6,000,000)
Keywordsserum albumin / photoaffinity labeling / ketoprofen / flunitrazepam / drug binding site / topology analysis / amino acid residue / 血清アルブミン / フルニトラゼバム / プローブ / 阻害挙動
Research Abstract

Arylpropionic acid NSAIDs and benzodiazepines are known to bind to site II of human serum albumin (HAS). However, information on the amino acids of the binding site that interact with these drugs is still insufficient. Ketoprofen (KP), an arylpropionic acid NSAID possessing benzophenone moiety and flunitrazepam (FNZP), a benzodiazepine with nitrophenyl moiety were used as photoaffinity labeling agents to define the microenvironment of site II on HAS. CNBr fragments of the [ィイD114ィエD1C]KP photolabeled HAS of about 14 kDa and 9 kDa incorporated radioactivity. Competition experiment showed that the 14 kDa band was the specifically photolabeled band. The 14 kDa peptide was redigested with Achromobacter lyticus protease I (AP I) and then separated with capillary HPLC. The amino acid sequence of the [ィイD114ィエD1C]KP photolabeled peptide was concluded to be XCTESLVNRR, which corresponded to 476C - 500K of HAS. This region of HAS was reported to be part of the site II hydrophobic binding pocket. Benzodiazepine (BDZ) drugs are known to bind to both human serum albumin (HAS) and alphal-acid glycoprotein (AGP). It is generally accepted that benzodiazepine drugs bind to subdomain III A (site II) of HAS. CNBr fragment of about 20 kDa of the [ィイD13ィエD1H]FNZP photolabeled HAS incorporated most of the radioactivity while the major photolabeled band of AGP seemed to be the N-terminus CNBr fragment The 20 kDa band radioactivity decreased sharply when HAS was photolabeled with FNZP in the presence of myristic acid but not in the presence of diazepam. The reverse displacement effect was observed for the N-terminus band of AGP. Further fluorescent probe displacement experiment showed that FNZP failed to displace the site II probe dansylsarcosine. The key position in the BDZ molecular structure that governs the binding affinity to site II of HAS was concluded to be position 7 of ring A.

Report

(4 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • 1997 Annual Research Report
  • Research Products

    (36 results)

All Other

All Publications (36 results)

  • [Publications] V.T.G. Chung: "Microenvironmental analysis of drug binding site on HAS using photoaffinity labeling technique"第27回構造活性シンポジウム講演要旨集. 178-179 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Y. Tsutsumi et al.: "Interaction between two carboxylate endogeous substances, bilirubin and anuremic toxin, CMPF, on HAS"Pharmaceutical Research. 16・(6). 916-923 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] K. Yamasaki et al.: "Interactive binding to the two princepal ligand binding sites of HAS : effect of the N-B transition"Biochimica Biophysica Acta. 1432. 313-323 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] V. T. g. Chuang et al.: "Helix of subdomain IIIA of HAS is thevregion primarily photolabeled by ketoprofen"Biochimica Biophysica Acta. 1434. 18-30 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] T. Sakai et al.: "Stereoselective serum protein binding of ketoprofen in linen diseases"Enantiomer. 4・(5). 477-482 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] C. Kawasaki et al.: "charcoal hemoperfasion in the treatment of phenytain overdose"American Journal of Kidney Diseases. 35・(2). 323-326 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 小田切優樹(永井恒司監修): "新しいドラッグデリバリーシステム"シーエムシ. 227 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Narazaki R, et al.: "An immunological method for the detection of captopril-protein conjugate"Arch Toxicol. 72(4). 203-206 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosa T, et al.: "Species differences of serum albumins: II. Chemical and thermal stability"Pharm Res.. 15(3). 449-454 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Takamura N, et al.: "Effects of fatty acids on serum binding between furosemide and valproic acid"Biol Pharm Bull.. 21(2). 174-176 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosa T, et al.: "Species differences of serum albumins: III. Analysis of structural characteristics and ligand binding properties king N-B transitions"Pharm Res.. 15(4). 592-598 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tsutsumi Y, et al.: "Interaction between two dicarboxylate endogenous substances, bilirubin and an uremic toxin, 3-carboxy-4-methyl-5-propyl-2-furanpropanoic acid, on human serum albumin"Pharm Res.. 16(6). 916-923 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Yamasaki K. et al.: "Interactive binding to the two principal ligand binding sites of human serum albumin: effect of the neutral-to-base transition"Biochim Biophys Acta.. 1432(2). 313-323 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Chuang VTG, et al.: "Helix 6 of subdomain III A of human serum albumin is the region primarily photolabeled by ketoprofen, an arylpropionic acid NSAID containing a benzophenone moiety"Biochim Biophys Acta.. 1434(1). 18-30 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Sakai T, et al.: "Stereoselective serum protein binding of ketoprofen in liver diseases"Enantiomer. 4(5). 477-482 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kawasaki C, et al.: "Charcoal hemoperfusion in the treatment of phenytoin overdose"Am J Kidney Dis.. 35(2). 323-326 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tsutsumi Y, et al.: "Decreased bilirubin-binding capacity in uremic serum caused by an accumulation of furan dicarboxylic acid"Nephron. 84(3). 2000 ((in press))

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] V.T.G.Chuang: "Microenvinomental analysis of drug bimding site on HSA using photoaffinity labeling techinque"第27回構造活性シンポジウム講演要旨集. 178-179 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Y. Tsutsumi et al: "Interaction between two carboxylate evdogeous substances,bilirubin and an uremic toxin, CMPF,on HSA"Pharmacentical Research. 16・(6). 916-923 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] K.Yamasaki et al: "Interactive binding to the two principal ligand binding sites of HSA:effect of the N-B transition"Biochimica Biophysica Acta. 1432. 313-323 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] V.T.G.Chuang et al: "Helix of subdomain IIIA of HSA is the region primarinly photo labeled by ketoprofen"Biochimica Biophysica Acta. 1434. 18-30 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] T.Sakai et al: "Stereoselective serum protein binding of ketoprofen in liver diseases"Enantiomer. 4・(5). 477-482 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] C.Kawasaki et al: "Charcoal hemoperfusion in the treatment of phenytoin overdose"Americal Journal of Kidney Deseases. 35・(2). 323-326 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] 小田切優樹(永井恒司監修): "新しいドラッグデリバリーシステム"シーエムシ. 227 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] K.Kosa: "Species differences of serum albumins:Chemical and thermal stability" Pharmaceutical Research. 15(3). 449-453 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Kosa: "Species differences of serum albumins:III.Analysis of structural characteristics and ligand binding protein during N-B transitions" Pharmaceutical Research. 15(4). 592-597 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] M.Sakai: "Effects of absorption enhancers on cytoskeletal actin filaments in Caco-2 cell monolayers" Life Sciences. 63(1). 45-54 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Komori: "Effect of clarithromycin on α_1-acid glycoprotein levels in normal and diabetic rats" Research Communication in Molecular Pathology and Pharmacology. 101(3). 233-240 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] C.Tuan: "Microenviromental analysis of site II drug binding site on HSA using photoaffinity labeling technique" 第26回構造活性相関シンポジウム. 236-237 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Tsutsumi: "Interaction between two carboxylate endogeneous substances,bilirubin and an uremic toxin,CMPF,on human serum albumin" Pharmaceutical Research. 16(6)(in press). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] 奈良崎竜一、小田切優樹: "Covalent Binding of a Bucillamine Derivative with Albumin in Sera from Healthy Subjects and Patients with Various Disease" Pharmaceutical Research. 14・2. 351-353 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 高村徳人、小田切優樹(他4名): "Interaction Aldosterone Antagonist Diuretics with Human Serum Proteins" Pharmaceutical Research. 14・4. 522-526 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 奈良崎竜一、小田切優樹(他1名): "Probing the Cysteine 34 Residue in Human Serum Albumin using Fluorescence Techniques" Biochimica Biophysica Acta. 1338. 275-281 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 甲佐貴光、小田切優樹(他1名): "Species Difference of Serum Albumins I. Drug Binding Sites" Pharmaceutical Research. 14・11. 1608-1613 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 高村徳人、小田切優樹(他1名): "Effect of Uremic Toxins and Fatty Acids on Serum Protein Binding of Furosemide : Possible Mechanism of Binding Defect in Uremia" Clinical Chemistry. 43・12. 2274-2280 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 甲佐貴光、小田切優樹(他3名): "Species Difference of Serum Albumins II. The Chemical and Thermal Stability" Pharmaceutical Research. 15・3(in press). (1998)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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