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Development of detection, identification and strain discrimination methods of strain by using gene analysis

Research Project

Project/Area Number 09556069
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section展開研究
Research Field Applied veterinary science
Research InstitutionAzabu University

Principal Investigator

KANEUCHI Choji  Azabu University, School of Veterinary Medicine, Professor, 獣医学部, 教授 (20087597)

Co-Investigator(Kenkyū-buntansha) KIUCHI Akio  Azabu University, School of Veterinary Medicine, Professor, 獣医学部, 教授 (60120953)
FUKUYAMA Masafumi  Azabu University, College of Environmental Health, Professor, 環境保健学部, 教授 (40075932)
MATSUDA Motoo  Azabu University, College of Environmental Health, Professor, 環境保健学部, 教授 (50139531)
CHUMA Takehisa  Kagoshima University, Faculty of Agriculture, Associate Professor, 農学部, 助教授 (90201631)
ITOH Kikuji  The University of Tokyo, Graduate School of Agricultural and Life sciences, Associate Professor, 大学院・農学生命科学研究科, 助教授 (50100045)
Project Period (FY) 1997 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥12,100,000 (Direct Cost: ¥12,100,000)
Fiscal Year 1999: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1998: ¥3,900,000 (Direct Cost: ¥3,900,000)
Fiscal Year 1997: ¥6,200,000 (Direct Cost: ¥6,200,000)
KeywordsCampylobacter / Identification / Detection / Strain discrimination / PCR / Invasion into cells / Urease / Attachment to cells / ニワトリ / 血清型別 / コンセンサスプライマー / カンピロバクター / パルスフィールドゲル電気泳動 / 16SrDNA配列
Research Abstract

1. Recently much attention has been paid to urease-positive thermophilic Campylobacter (UPTC) isolated from natural environment. DNA analysis was carried out of approximately 60 strains of UPTC widely collected from Japan, North Ireland, England, France and the Netherlands. Most of the strains studied had different genotypes thus suggesting the diversity of genomes and possibility of strain discrimination. The genomes sizes were found to be 1.6 to 1.9Mb.
2. Multiplex PCR method was established for quick and simultaneous identification of C.jejuni, C.coli, and C.lari. Using this method as well as southern blot method, C.jejuni could directly be detected in the feces of chickens. Possibility of the vertical transmission of C.jejuni and C.coli from hen to chick was demonstrated to be quite low by the RFLP analysis of flagellin gene of C.jejuni strains isolated from chickens.
3. Attachment degrees to INT-407 cells were found to be similar for the strains of C.jejuni isolated from the disease … More d and healthy chickens. However, the invasion activity into the cells differed from strain to strain with the clear tendency of the clinical strains showing higher activity of invasion than the strains from healthy chickens. Furthermore, the invasion activity was impeded by different anti-invasion agents. These suggested that the invasion mechanism is diverse in association with the diverse transmission modes and clinical symptoms by C.jejuni.
4. Identification of Campylobacter species and strain discrimination revealed the following details by using PCR-RFLP analysis based on the base sequence of 16S rRNA :
(1) C.upsaliensis was distinguished from C.jejuni, C.coli, and C.lari by digestion pattern with restriction enzyme. Dde I of the respective amplified RNA of the 4 species when consensus primer set _<45/>47 was used.
(2) C.coli strains did not yielded the PCR product with 6 different sets of primers suggesting that there are strain variations in the 5' and 3' terminal base sequences.
(3) C.lari strains amplified DNA segments only when consensus primer _<45/>47 was used. Less

Report

(4 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • 1997 Annual Research Report
  • Research Products

    (34 results)

All Other

All Publications (34 results)

  • [Publications] Matsuda,M., et al.: "First finding of urease-positive thermophilic strains of Campylobacterin river water in the Far East, namely, in Japan, and their phenotypic and -"J.Appl Bacteriol.. 81. 608-612 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Chuma,T., et al.: "Direct detection of Campylobacter jejuniin chiken cecal contents by PCR."J.Vet.Med.Sci.. 59・1. 85-87 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 只野敬子 等: "下痢患者由来Campylobacter jejuniのニューキノロン薬に対する薬剤感受性の年次別推移"感染症学雑誌. 70. 1227-1233 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 新垣正夫 等: "Campylobacter属および類似菌の菌種鑑別法としての迅速アリールスルファターゼ試験の検討"日本臨床微生物学雑誌. 7・1. 15-20 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 伊藤武 等: "Campylobacter jejuni/coli."J.Antibact.Antifung.Agents. 25・12. 711-718 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 横山敬子 等: "鶏および鶏肉由来Campylobacter属菌のニューキノロン剤に対する薬剤感受性"東京衛研年報. 48. 3-8 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Chuma,T., et al.: "Analysis of distribution of Campylobacter jejuni and Campylobacter coli in broilers by using restriction fragment length polymorphism of flagellin gene."J.Vet.Med.Sci.. 59・11. 1011-1015 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 松田基夫: "9^<th> International Workshop on Campylobacter, Helicobacter and Related Organisms."Helicobacter Research. 1・5. 523-526 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 武藤哲典 等: "Campylobacter jejuniのLipopolysaccharide(C.jejuni-LPS)によるラットおよびモルモットリンパ球の幼若化"J.Environ.Dis.. 5. 1-7 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 加藤行男 等: "ビル内飲食店と魚市場のネズミにおけるSalmonellaおよびCampylobacter保菌状況"日獣会誌. 52. 194-197 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kaneko. A., et al.: "Urease-positive thermophilic strains of Campylobacterisolated from seagulls (Larus spp)"Let.Appl.Microbiol.. 29. 7-9 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Pham,H-S., et al.: "Methods for rapid cloning and detection for sequencing of cloned inverse PCR-generated DNA fragments adjacent to known sequences in bacterial-"Microbiol.Immunol.. 43. 829-836 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Misawa,N.. et al.: "Isolation of Campylobacter species from zoo animals and polymerase chain reaction-based random amplified polymorphism DNA analysis."Vet.Microbiol.. 71. 59-68 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Biswas.D., et al.: "Uptake pathways of clinical and healthy animal isolates of Campylobacter jejuni into INT 407 cells"Med.Microbiol.. 29. 203-211 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kiuchi.A., et al.: "Detection and investigation of Campylobacter jejuni by polymerase chain reaction-restriction fragment length polymorphism analysis."Microbios. 102. 159-164 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Chuma,T., et al.: "Detection of thermophilic Campylobacter from sparrows by multiplex PCR"J.Vet.Med.Sci.. 62・12. 1291-1295 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Matsuda M., et al.: "First finding of urease-positive thermophilic strains of Campylobacter in river water in the Far East, namely, in Japan, and their phenotypic and genotypic characterization."J.Appl.Bacteriol.. 81. 608-612 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Chuma T., et al.: "Direct detection of Campylobacter jejuni in chicken cecal contents by PCR."J.Vet.Med.Sci.. 59(1). 85-87 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tadano K., et al.: "Evolution of susceptibilities of Campylobacter jejuni isolated from diarrhoeal cases to fluoroquinolones in Tokyo."Kansenshogaku Zasshi. 70(12). 1227-1233 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Itoh T.: "Campylobacter jejuni/coli."J.Antibact.Antifung.Agents. 25(12). 711-718 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Yokoyama K., et al.: "The antimicrobial susceptibility of Campylobacter isolated from chicken and raw chicken meat to fluoroquinolones."Ann.Rep.Tokyo Metr.Res.Lab.P.H.. 48. 3-8 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Chuma T., et al.: "Analysis of distribution of Campylobacter jejuni and Campylobacter coli in broilers by using restriction fragment length polymorphism of flagellin gene."J.Vet.Med.Sci.. 59(11). 1011-1015 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Matsuda M.: "9th International Workshop on Campylobacter, Helicobacter, and related organisms."Helicobacter Research. 1(5). 523-526 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Mutoh T., et al.: "Comparison with guinea pig and rat on blastogenic response of spleen cells after in vitro stimulation with Campylobacter jejuni-LPS"J.Environ.Dis.. 5. 3-9 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kato Y., et al.: "Detection of Salmonella and Campylobacter from rats trapped at restaurants and a fish market."J.Jpn.Vet.Assoc.. 51(3). 194-197 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kaneko A., et al.: "Urease-positive thermophilic strains of Campylobacter isolated from seagulls (Larus spp.)."Lett.Appl.Microbiol.. 29(1). 7-9 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Pham H.S., et al.: "Methods for rapid cloning and detection for sequencing of cloned inverse PCR-generated DNA fragments adjacent to known sequences in bacterial chromosomes."Microbiol.Immunol.. 43(9). 829-36 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Misawa N., et al.: "Isolation of Campylobacter species from zoo animals and polymerase chain reaction-based random amplified polymorphism DNA analysis."Vet.Microbiol.. 71. 59-68 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Biswas D., et al.: "Uptake pathways of clinical and healthy animal isolates of Campylobacter jejuni into INT-407 cells."FEMS Immunol.med.Microbiol.. 29. 203-211 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kiuchi A., et al.: "Detection and investigation of Campylobacter jejuni by polymerase chain reaction-restriction fragment length polymorphism analysis."Microbios. 102. 159-164 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Chuma T., et al.: "Detection of thermophilic Campylobacter from sparrows by multiplex PCR : the role of sparrows as a source of contamination of broilers with Campylobacter."J.Vet.Med.Sci.. 62(12). 1291-1295 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Chuma, T.: "Analysis of Distribution of Campylobacter jejuni and Campylobacter coli in Broiler by Using Restriction Fragment Length Polymorphism of" J.Vet.Med.Sci.59・11. 1011-1015 (1997)

    • Related Report
      1998 Annual Research Report
  • [Publications] Matsuda,M.: "First finding of urease-Positive thermophilic strains of Campylobaeter in river water in the Far East,namely in Japan-" J.Appl.Bacteriol.81. 608-612 (1996)

    • Related Report
      1997 Annual Research Report
  • [Publications] Chuma,T: "Direct detection of Campylobacter jejuni in chicken cecal contents by PCR" J.Vet.Med.Sci.59(1). 85-87 (1997)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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