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Development of Simulator for Vesicular Transport in Cells - Application to Study of Mechanism of Vesicular Transportation and Cell Locomotion.

Research Project

Project/Area Number 09558111
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section展開研究
Research Field Biomedical engineering/Biological material science
Research InstitutionYAMAGATA UNIVERSITY

Principal Investigator

KOSAWADA Tadashi  Mechanical Systems Engineering, Yamagata University, Associate Professor, 工学部, 助教授 (10143083)

Co-Investigator(Kenkyū-buntansha) IIJAMA Yoshiaki  School of Medicine, Yamagata University, Research Associate, 医学部, 助手 (90241710)
NAKADA Teruhiko  School of Medicine, Yamagata University, Professor, 医学部, 教授 (50009495)
KUBOTA Yohko  School of Medicine, Yamagata University, Associate Professor, 医学部, 助教授 (60125763)
Project Period (FY) 1997 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥8,800,000 (Direct Cost: ¥8,800,000)
Fiscal Year 1999: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1998: ¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 1997: ¥4,100,000 (Direct Cost: ¥4,100,000)
KeywordsVesicular Transport / Simulator / Bio-membrane / large Deformation Analysis / Analytical Method / Finite Element Method / Chained Vesicles / Outer Surrounding Cytoplasmic Membrane / 細胞内輸送 / 膜小胞 / 細胞移動 / リポゾーム
Research Abstract

A simulator for vesicular transport in cells was developed based on recent knowledge of molecular biology of the cell. Analytical method as well as finite element method were utilized to achieve the goal.
1. Simulation of vesicular transport based on the analytical method
(1) When the opening perimeter of a spherical membrane shell is unfolded with its perimeter kept parallel to its axis, there exists several points where the shapes and the tensions change significantly with slight changes of the opening radius. This is considered to be the bucking-like phenomena of the membrane with a spontaneous curvature.
(2) In the repeating units of chained vesicles, it is found that the cylindrical tube shape and the hourglass shape are stable with respect to energy.
(3) It is theoretically suggested that the chained vesicles and the cylindrical channel derived from the chained vesicles are some of the stable shapes with respect to energy and can potentially be formed and presented in the vascular en … More dothelial cell.
(4) The computed shape suggests that the effects of in-plane shear elasticity and outer surrounding cytoplasmic membrane are significant and these should be taken into account in theoretical analysis.
(5) The chained vesicle changes its shape dramatically even when the opening radius slightly increases from the starting shape. The jump-like phenomena of strain energy was often observed where each constriction disappears.
2. Development of the specific finite element method for vesicular transport simulator by utilizing Mathematica
(1) Formulation of the finite element method was developed based on elastic potential energy function. The requirement of constant surface area of the membrane was satisfied by implementing additional surface pressure.
(2) The requirement of constant surface area of the membrane has significant effect on deformed shape of the vesicle.
(3) Mooney-Rivlin type strain energy density function, which was developed for rubber red cell model, was utilized. The computed cortical tension was given as 0.003-0.18 dyn/cm. This results support the know experimental data of 0.03 dyn/cm. Less

Report

(4 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • 1997 Annual Research Report
  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] 小沢田,吉田,Skalak,Achimid-Schonbein: "血管内皮細胞における連結小胞及びチャネルの生成メカニズム"日本機械学会論文集(C編). 63-607. 823-830 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosawada,Takeno,Skalak,et al.: "Formation of Chained Vesicle on Vascular Endothelial Cell and Its Dynamic Aspects"Proc. of Inter. Conf. of New Frontiers in Biomechanical Engineering. 85-88 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 小沢田: "生体組織・細胞力学"日本機械学会誌. 101-957. 411-412 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosawada,Yoshida,Skalak,et al.: "Generation Mechanism of Vascular Endothelial Chained Vesicles and Transendothelial Channel"JSME International Journal,C. 42-3. 796-803 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosawada,Skalak,Schmid-Shonbein: "Chained Vesicles in Vascular Endothelial Cells"ASME J. of Biomechanical Engineering. 121-5. 472-479 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 小沢田: "膜動シミュレータの開発研究-ガン細胞転移発生機序解明への応用"医科学応用研究財団研究報告1998. 58-67 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kasawada, T., Yoshida, O., Skalak, R., Schmid-Schoenbein, G.W.: "Generation Mechanism of Vascular Endothelial Chained Vesicles and Transendothelial Channel"Transactions of the JSME, C (in Japanese). 63-607. 823-830 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosawada T., Takeno T., Skalak R., Schmid-Schonbein G.W.: "Formation of Chained Vesicle on Vascular Endothelial Cell and Its Dynamic Aspects"Proceedings of the International Conference on New Frontiers in Biomechanical Engineering, Tokyo. 85-88 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosawada T.: "Biological Tissue and Cell Mechanics"Journal of the JSME. 101-No.957. 411-412 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosawada, T., Yoshida, O., Skalak, R., Schmid-Schoenbein, G.W.: "Generation Mechanism of Vascular Endothelial Chained Vesicles and Transendothelial Channel"JSME International Journal, Series C. 42,No.3. 796-803 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosawada, T., Skalak, R., Schmid-Schoenbein, G.W.: "Chained Vesicles in Vascular Endothelial Cells"ASME Journal of Biomechanical Engineering. 121-5. 472-479 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosawada T.: "Development of Simulator for Vesicular Transport in Cells - Application to Study of Mechanism of Metastasis of Cancer Cells"Research Papers of the Suzuken Memorial Foundation 1998 (in Japanese). 17. 58-67 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Kosawada, Skalak, Yoshida, Schmid-Schoenbein: "Generation Mechanism of Vascular Endothelial Chained Vesicles and Transendothelial Channel"JSME Internationd Journal, Series C. 42・3. 796-803 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kosawada, Skalak, Schmid-Schoenbein: "Chained Vesicles in Vascular Endothelial Cells"ASME J.of Biomechanical Engineering. 121・5. 472-479 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 小沢田、笹木原、小野寺: "細胞内膜動輸送シミュレーター用有限要素法の開発"日本機械学会 D&D Conf.'99,講演論文集. A. 235-238 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 小沢田、高橋: "細胞内膜動輸送に及ぼす面内せん断及び周辺細胞膜の影響"日本機械学会東北支部米沢地方講演会講演論文集. -. 207-208 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 小沢田、高野: "細胞内膜動輸送に及ぼす多重小胞及びその周辺細胞膜の影響"日本機械学会東北支部米沢地方講演会講演論文集. -. 209-210 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 小沢田: "膜動輸送シミュレータの開発研究-ガン細胞転移発生機序解明への応用-"医科学応用研究財団研究報告1998. 17. 58-67 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kosawada, Kuni-i, Arikawa: "Mechanical Stresses Induced in Cell and Their Sensing by Using Dynamic Response of Piezoelectric Micro-Vibrator" Proceedings of the 4-th international Conf.on Motion and Vibration Control, Zurich. Vol.1. 183-188 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kosawada, Schmid-Schon bein, Skalak: "Dynamic Aspects of Endothelial Cell Vesicles-A Theoretical Analysis" Proceedings of the 3rd World Congress of Biomechanics, Sapporo. 317-317 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 小沢田,江口,渡辺: "細胞内膜動輸送における小胞の変形挙動-面内せん断の影響-" 日本機械学会全国大会講演論文集. Vol.II, 98-3. 295-196 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 小沢田 正: "生体組織・細胞力学" 日本機械学会誌. 101・957. 411-412 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 小沢田,有川,西田: "ピエゾマイクロプローブセンサーを用いた細胞の環境ストレス検出システムの開発" 日本機械学会D.&D.Conf.99.講演論文集. 発表予定. (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] 小沢田,笹木原,小野寺: "細胞内膜動輸送シミュレータ用有限要素法の開発" 日本機械学会D.&D.Conf.99.講演論文集. 発表予定. (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kosawada, Skalak et al.: "Formation of Chained Vesicle on Vascular Endothelial Cell and Its Dynamic Aspects" Proc. International Conf. on New Frontiers in Biomechanical Engineering. 85-88 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 小沢田, 吉田, Skalak et al.: "血管内皮細胞における連結小胞およびチャネルの生成メカニズム" 日本機械学会論文集. 63-607C. 823-830 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kosawada, Iijima, Kubota, Nakada, et al.: "A New Approach for Identification of Dynamic Properties of Mammalian Soft Tissues" Proc. International Conf. on New Frontiers in Biomechanical Engineering. 467-470 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 小沢田, 渡辺, Skalak et al.: "細胞内小胞膜シェルの力楽挙動におけるせん断変形の影響" 日本機械学会 D & D Conf.97,講演論文集. 97-10. 309-312 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 小沢田, 小野寺, Skalak et al.: "細胞膜シェル構造体の大変形解析用FEMの開発" 日本機械学会 D&D Conf.97,講演論文集. 97-10. 305-308 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Kosawada, Schmid-Schonbein et al.: "Dynamic Aspects of Endothelial Cell Vesicle-A Theoretical Analysis" Proc. The Third World Congress of Biomechanics. (発表予定). (1998)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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