• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Redox Splitting Mechanism of C(5)-C(5)-linked Dihydrothymine Dimers

Research Project

Project/Area Number 09640632
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Organic chemistry
Research InstitutionKyoto University

Principal Investigator

NISHIMOTO Sei-ichi  Kyoto University Energy and Hydrocarbon Chemistry Professor, 工学研究科, 教授 (10115909)

Co-Investigator(Kenkyū-buntansha) ZHOU Ling  Kyoto University Energy and Hydrocarbon Chemistry Instructor, 工学研究科, 助手 (50293890)
Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥2,800,000 (Direct Cost: ¥2,800,000)
Fiscal Year 1998: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 1997: ¥1,800,000 (Direct Cost: ¥1,800,000)
KeywordsThymine Derivatives / Radiation Reductive Dimerization / C(5)-C(5)-Linked Dimers / Meso Isomer / Racemic Isomer / Laser Photolysis / Photo-Induced Electron Transfer / C(5)-C(5)-Linkege Splitting / C(5)-C(5)結合二量体 / 結晶構造 / コンホメーション
Research Abstract

Redox mechanism by which meso- and racemic forms of C(5)-C(5)-linked dihydrothymine dimers (5a-c), as derived from various thymine derivatives [1-methylthymine (1a) ; 1,3-dimethylthymine (1b) ; thymidine (1c)], undergo splitting to regenerate 1a-c was studied and the following results were obtained.
(1) Product studies on radiolytic and photosensitized redox splittings of 5a-c in aqueous solution were carried out to correlate with their structural characteristics.
(2) A structure-dependent reactivity was elucidated that 5a undergoes splitting by one-electron reduction, while 5b, c favor two-electron reductive splitting.
(3) Meso-form of 5a showed fluorescence spectrum with a maximum intensity at 370 nm, although the other dimers were of non-fluorescent.
(4) Conformation of 5a in aqueous solution was determined by NMR, indicating that the meso-form favors a conformation similar to that in the crystal phase.
(5) One-electron reduction potentials of 5a-c were evaluated from the corresponding rate constants of electron-transfer quenching for the fluorescence of ruthenium complex (Ru(bpy)_3Cl_2 6H_20).
(6) One-electron oxidative splitting of 5a by SO_4- as generated by laser photolysis was studied to observe transient spectra due to 1-methyl-5,6-dihydrothymin-5-yl radicals that were derived from both meso- and racemic- forms. The rate constants of second-order decay were evaluated as 2.2 - 2.7 x 10^9 M^<-1> s^<-1>.
(7) No transient spectra due to 5-yl radicals were observed in the laser photolysis of 5a-c in aqueous solution containing N,N-dimethylaniline as a reducing photosensitizer.

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (12 results)

All Other

All Publications (12 results)

  • [Publications] 西 本 清 一: "Hydroxyl Radical-Induced Cross-Linking of Thymine and Lysine : Identification of the Orimary Structure and Mechanism" Bioorganic & Medicinal Chemistry Letters. 8・. 865-870 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 周 玲: "Remarkable Tethering Effect on DNA Cleavage of Propargylic Sulfone Conjugates with Intercalating Moieties" Bioorganic & Medicinal Chemistry Letters. 8・. 169-174 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 西 本 清 一: "Stereoisomeric C5-C5'-Linked Dihydrothymine Dimers Produced by Radiolytic One-Electron Reduction of Thymine Derivatives in Anoxic Aqueous Solution : Structural Characteristics in Reference to Cyclobutane Photodimers" Journal of Organic Chemistry. 64・(受理). (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 周 玲: "Synthesis and DNA Cleavage Study of a 10-Membered Ring Enediyne Formed via Allylic Rearrangement" Journal of Organic Chemistry. 64・3. 682-683 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Morimoto, S. ; Hatta, H. ; Fujita, S. ; Matsuyama, T. ; Ueno, T. ; Nishimoto, S.: "Hydroxyl Radical-Induced Cross-Linking of Thymine and Lysine : Identification of the Orimary Structure and Mechanism" BioMed Chem.Lett.8. 865-870 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Dai, W.-M. ; Li, Q. ; Fong, K.-C. ; Chow, C.-W. ; Zhou, L. ; Hamaguchi, W. ; Nishimoto, S.: "Remarkable Tethering Effect on DNA Cleavage of Propargylic Sulfone Conjugates with Intercalating Moieties" BioMed Chem.Lett.8. 169-174 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ito, T. ; Shinohara, H. ; Hatta, H. ; Nishimoto, S.: "Stereoisomeric C5-C5'-Linked Dihydrothymine Dimers Produced by Radiolytic One-Electron Reduction of Thymine Derivatives in Anoxic Aqueous Solution : Structural Characteristics in Reference to Cyclobutane Photodimers" J.Org.Chem.64 (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Dai, W.-M. ; Li, Q. ; Fong, K.-C. ; Law, C.-W. ; Zhou, L. ; Hamaguchi, W. ; Nishimoto, S.: "Synthesis and DNA Cleavage Study of a 10-Membered Ring Enediyne Formed via Allylic Rearrangement" J.Org.Chem.64. 682-683 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 西本清一: "Stereoisomeric C5-C5'-Linked Dihydrothymine Dimers Produced by Radiolytic One-Electron Reduction of Thymine Derivatives in Anoxic Aqueous Solution:Structural Characteristics in Reference to Cyclobutane Photodimers" Journal of Organic Chemistry. 64. 受理 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] 周 玲: "Synthesis and DNA Cleavage Study of a 10-Membered Ring Enediyne Formed via Allylic Rearrangement" Journal of Organic Chemistry. 64・3. 682-683 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] 西本清一: "Hydroxyl Radical-Induced Cross-Linking of Thymine and Lysine:Identification of the Orimary Structure and Mechanism" Bioorganic & Medicinal Chemistry Letters. 8・(印刷中). (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] 周 玲: "Remarkable Tethering Effect on DNA Cleavage of Propargylic Sulfone Conjugates with Intercalating Moieties" Bioorganic & Medicinal Chemistry Letters. 8・2. 169-174 (1998)

    • Related Report
      1997 Annual Research Report

URL: 

Published: 1997-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi