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Molecular biological studies on active ion transporters present in Acetabularia acetabulum

Research Project

Project/Area Number 09640780
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 植物生理
Research InstitutionOkayama Prefectural University (1997, 1999)
University of Tsukuba (1998)

Principal Investigator

IKEDA Mikiko  Department of Nutritional Science, Faculty of Health & Welfare Science, Okayama Prefectural University Professor, 保健福祉学部, 教授 (20112154)

田仲 可昌 (1998)  筑波大学, 生物化学系, 教授 (80091908)

Project Period (FY) 1997 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥3,100,000 (Direct Cost: ¥3,100,000)
Fiscal Year 1999: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 1998: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1997: ¥1,700,000 (Direct Cost: ¥1,700,000)
KeywordsAcetabularia / Cl^--translocating ATPase / V-ATPase / V-PPase / ABC transporter / cDNA cloning / heterologous expression / カサノリ(Acetabularica) / CL^-輸送性ATPase / 細胞性粘菌 / 形態形成 / Polysphondylium pallidum / p24 family / 小胞輸送 / 挿入突然変異 / カサノリ(Acetabularia acetabulum) / カサノリ / C1^-輸送性ATPase / クローニング
Research Abstract

Molecular biological studies were done for active ion transporters present in Acetabularia acetabulum which had been biochemically investigated by us, namely 1) Cl^--translocating ATPase, 2) two proton pumps (V-ATPase and V-PPase) in vacuolar membrane and 3) ATP-binding cassette type ATPase (ABC transporter). The results obtained for the respective transporter are as following.
1) Cl^--ATPase : Among the three subunits, a (54 kDa), b (50 kDa) and c (40 kDa) the primary structures of the a and b subunits were elucidated by molecular cloning and they showed the highest similarity to the F-type ATPase, α and β subunits, respectively. As for the b subunit, exchangeability with the β subunit of Escherichia coli F_1-ATPase was studied using E.coli F_1-β deficient strain. The polypeptide of the b subunit was incorporated into the membrane fraction, but no oxidative phosphorylation was observed. By analysis of chimeric proteins of the Cl^--b and F_1-β subunit, a region between 96 and 161 amino … More acid was supposed to play important roles in the function.
2) V-ATPase and V-PPase : Two different cDNAs were isolated for the A and B subunits of Acetabularia V-ATPase, respectively and six different cDNAs for the proteolipid subunit. Three of six proteolipid subunits were transformed in Saccharomyces cerevisiae vma3-deficient strain lacking the proteolipid subunit and quinacrine uptake in acidic organelles was observed by fluorescent microscopy. Data preliminarily supported functional complementation of the vma3-deficient strain with the proteolipid subunits of Acetabularia V-ATPase.
One cDNA coding for V-PPase was isolated and sequenced. The primary structure showed 46% identity to R.rubrum and Chara PPase. Acetabularia V-PPase was most effectively expressed in S.cerevisiae BJ5459 strain after recombination of the gene with pYES2 as a yeast expression vector. The expressed PPase was partially purified by hydrophobic and anion-exchange chromatographies and its characteristics as PPase were similar to native Acetabularia V-PPase. As preliminary results, membrane vesicle prepared from the transformant showed H^+- pumping activity.
3) ABC transporter : A full length cDNA coding for the CysA protein of sulfate permease was isolated from Acetabularia. Acetabularia CysA protein consisits of 357 amino acids with a molecular weight of 40,679. The primary structure is 48.7% identical to Anacystis nidulans CysA protein. Less

Report

(5 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (29 results)

All Other

All Publications (29 results)

  • [Publications] Moritani,C. et al.: "The primary structure of the Cl^--translocating ATPase, b subunit of Acetabularia acetabulum which belongs to the F-type ATPase family."Arch.Biochem.Biophys.. 339. 115-124 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda,M. et al.: "Molecular cloning of cDNAs (AB003937, AB003938) encoding Acetabularia acetabulum V type ATPase, proteolipid subunit."Plant Physiol.(PGR97-108). 114. 1568 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda,M. et al.: "Exchangeability of the b subunit of the Cl^--translocating ATPase of Acetabularia acetabulum with the β subunit of Escherichia coli F_1-ATPase."Biochim.Biophys.Acta. 1322. 33-40 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda,M. et al.: "A vacuolar H^+-pyrophosphatase in Acetabularia acetabulum : molecular cloning and comparison with higher plants and a bacterium."Journal of Experimental Botany. 50・330. 139-140 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Nakanishi,Y. et al.: "Molecular cloning and sequencing of the cDNA for vacuolar H^+-pyrophosphatase from Chara corallina."Biochim.Biophys.Acta. 1418. 245-250 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda,M. et al.: "Molecular cloning and sequencing of the cDNA for CysA protein of sulfate permease from Acetabularia acetabulum."Plant Cell Physiology. (in press). (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Moritani, C.et al.: "The primary structure of the Cl^--translocating ATPase, b subunit of Acetabularia acetabulum."Arch.Biochem.Biophys.. 339. 115-124 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda, M.et al.: "Molecular cloning of cDNAs (AB003937, AB 003938) encoding Acetabularia acetabulum V type ATPase, proteolipid subunit."Plant Physiol. 114. 1568 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda, M.et al.: "Primary structures of four additional cDNA clones (AB003939 to AB003942) coding for Acetabularia acetabulum, V type ATPase, proteolipid subunit."Plant Physiol. 115. 864 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda, M.et al.: "Exchangeability of the b subunit of the Cl^--translocating ATPase of Acetabularia acetabulum with the β subunit of Escherichia coli F_1-ATPase."Biochim.Biophys.Acta. 1322. 33-40 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda, M.et al.: "The primary structure of the Cl^--translocating ATPase, a subunit (AB12085) of Acetabularia acetabulum."Plant Physiol. 117. 718 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda, M.et al.: "A vacuolar H^+-pyrophosphatase in Acetabularia acetabulum : molecular cloning and comparison with higher plants and a bacterium."J.Exp.Bot.. 50 (330). 139-140 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Nakanishi, Y.et al.: "Molecular cloning and sequencing of the cDNA for vacuolar H^+-pyrophosphatase from Chara corallina."Biochim.Biophys.Acta. 1418. 245-250 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ohmori, S.et al.: "Saccharomyces cerevisiae cultured under aerobic and anaerobic conditions : air-level oxygen stress and protection against stress."Biochim.Biophys.Acta. 1472. 587-594 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda, M.et al.: "Molecular cloning and sequencing of the CysA protein of sulfate permease from Acetabularia acetabulum."Plant Cell Physiol.. (in press). (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Ikeda,M.et al.: "The Primary Structure of the Cl^--Translocating ATPase,a Subunit(AB12085) of Acetabularia acetabulum"Plant Physiology(PGR98-097). 117. 718 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] Ikeda,M.et al.: "A Vacuolar H^+-Pyrophosphatase in Acetabularia acetabulum : molecular cloning and comparison with higher plants and a bacterium"Journal of Experimental Botany. 50・330. 139-140 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Nakanishi,Y.et al.: "Molecular Cloning and Sequencing of the cDNA for Vacuolar H^+-Pyrophosphatase from Chara corallina"Biochim.Biophys.Acta. 1418. 245-250 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Ohmori,S.et al.: "Saccharomyces cerevisiae Cultured under Aerobic and Anaerobic Conditions: air-level oxygen stress and protection against stress"Biochim.Biophys.Acta. 1472. 587-594 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Ikeda,M.et al.: "Molecular Cloning and Sequencing of the cDNA for CysA protein of Sulfate Permease from Acetabularia acetabulum"Plant Cell Physiology. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kawabe, Y., Enomoto, T., Morio, T., Urushihara, H., Tanak, Y.: "LbrA, a protein predicated to have a role in vesicle trafficking, is necessary for normal morphogenes is in Polyphondyium pallidum"GENE. 239. 75-79 (1999)

    • Related Report
      1998 Final Research Report Summary
  • [Publications] Ikeda,M et al.: "The Primary Structure of the Cl^--Translocating ATPase,a Subunit(AB12085)of Acetabularia acetabulum." Plant Physiology(PGR98-097). (in press). (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Ikeda,M et al.: "A Vacuolar H^+-Pyrophosphatase in Acetabularia acetabulum: molecular cloning and comparison with higher plants and a bacterium" Journal of Experimental Botany. 50・330. 139-140 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Nakanishi,Y.et al.: "Molecular Cloning and Seuencing of the cDNA for Vacuolar H^+-Pyrophosphatase from Chara corallina" Biochim.Biophys.Acta. (in press). (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Moritani,C., Ohhashi,T., Kadowaki,H., Lottspeich,F., Oesterhelt,D., Ikeda,M.: "The primary structure of the C1-translocating ATPase, b subunit of Acetabularia acetabulum, which belongs to the F-type ATPase family." Arch.Biochem.Biophys.339. 115-124 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ikeda,M., Rahman,Md.H., Umami,K., Konishi,K., Moritani,C., Watanabe,Y.: "Molecular cloning of cDNAs (AB003937, AB003938) encoding Acetabularia acetabulum V type ATPase, proteolipid subunit." Plant Physiol. (PGR97-108). 114. 1568 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ikeda,M., Umami,K., Rahman,Md.H., Moritani,C., Watanabe,Y.: "Primary structures of four additional cDNA clones (AB003938 to AB003942) coding for Acetabularia acetabulum V type ATPase, proteolipid subunit." Plant Physiol. (PGR97-154). 115. 864 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ikeda,M., Kadowaki,H., Ikeda,H., Moritani,C., Kanazawa,H.: "Exchangeability of the b subunit of the C1^--translocating ATPase of Acetabularia acetabulum with the β subunit of Escherichia coli F1-ATPase." Biochim.Biophys.Acta. 1322. 33-40 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ikeda,M., Tanabe,E., Rahman,Md.H., Kadowaki,H., Moritani,C., Watanabe,Y.: "A vacuolar H^+-pyrophosphatase in Acetabularia acetabulum : Partial purification and molecular cloning." Arch.Biochem.Biophys.(in press). (1998)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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