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Molecular phylogenetic analysis on evolution and population diversity of the Iriomote cat and the Tsushima cat

Research Project

Project/Area Number 09640820
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 系統・分類
Research InstitutionHOKKAIDO UNIVERSITY

Principal Investigator

MASUDA Ryuichi  Fac.of Sci., Hokkaido Univ.Inst., 理学部, 助手 (80192748)

Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥3,100,000 (Direct Cost: ¥3,100,000)
Fiscal Year 1998: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 1997: ¥2,000,000 (Direct Cost: ¥2,000,000)
KeywordsIriomote cat / Tsushima cat / Molecular phylogeny / Molecular evolution / Population genetics / Geographic isolation / Genetic diversity
Research Abstract

The objective of this project was to understand the evolutionary history and genetic diversity of endangered populations of the Iriomote cat and the Tsushima cat, based on molecular genetic analysis. The results obtained in this study were as follows :
1) Sequence analysis of the mitochondrial DNA control region showed no variation in the Iriomote cat population, although this gene is thought to evolve most rapidly among mitochondrial genes.
2) Microsatellite DNA analysis showed a remarkably low genetic diversity in both populations of the Iriomote cat and the Tsushima cat, indicating genetic drift and/or inbreeding due to geographic isolation on the Iriomote Island and the Tsushima Island for approximately 0.2 and 0.1 million years, respectively.
3) Major histocompatibility complex (MHC) class II DRB locus was examined for the two wildcats and some alleles were obtained. At present, their sequences are being analyzed phylogenetically.
4) Some parts of the results of DNA analysis have been exhibited to public at the Wildlife Conservation Center of Tsushima.

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (24 results)

All Other

All Publications (24 results)

  • [Publications] 増田隆一: "イエネコ・ヤマネコの過去・未来" Biohistory生命誌. 21. 12-13 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masuda, R.: "Phylogenetic status of brown Ursus arctos of Asia : A preliminary result inferred from mitochondrial DNA control region sequences." Hereditas. 128. 277-280 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Takahashi, M.: "Sexing of carcass remains of the Sika deer (Cervus nippon) using PCR amplification of the Sry gene." Journal of Veterinary Medical Science. 60. 713-716 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masuda, R.: "Genetic characteristics of endangered Japanese golden eagles (Aquila chrysaetos japonica) based on mitochondrial DNA D-loop sequences and karyotypes." Zoo Biology. 17. 111-121 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 増田隆一: "日本産食肉目の種名の検討" 哺乳類科学. 37. 87-93 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 増田隆一: "動物園でのDNA利用-できること、できないこと-." どうぶつと動物園. 49. 182-187 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 増田隆一: "講座 地球・人間・環境 生態工学(分担執筆)" 丸善(印刷中),

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masuda, R.: "Past and future of domestic cats and wildcats" Biohistory. 21 (in Japanese). 12-13 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masuda, R.: "Phylogenetic status of brown bears Ursus arctos of Asia : A preliminary result inferred from mitochondrial DNA control region sequences" Hereditas. 128. 277-280 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Takahashi, M.: "Sexing of carcass remains of the Sika deer (Cervus nippon) using PCR amplification of the Sry gene" Journal of Veterinary Medical Science. 60. 713-716 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masuda, R.: "Genetic characteristics of endangered Japanese golden eagles (Aquila chrysaetos japonica) based on mitochondrial DNA D-loop sequences and karyotypes" Zoo Biology. 17. 111-121 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masuda, R.: "A review of species names of Japanese carnivores" Honyurui Kagaku (Mammalian Science). 37 (in Japanese). 87-93 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masuda, R.: "DNA-What it can and cannot tell us" Animals and Zoos. 49 (in Japanese). 182-187 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Masuda, R.: Earth-Human-environment : Ecological Technology. Masuzen (in Japanese) (in press),

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 増田隆一: "イエネコ・ヤマネコの過去・未来" Biohistory生命誌. 21. 12-13 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Masuda,R.: "Phyiogenetic status of brown bears Ursus arctos of Asia : A preliminary result inferred from mitochondrial DNA control region sequences" Hereditas. 128. 277-280 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Takahashi,M.: "Sexing of carcass remains of the Sika deer (Cervus nippon) using PCR amplification of the Sry Gene." Journal of Veterinary Medical Science. 60. 713-716 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 増田隆一: "講座 地球・人間・環境 生態工学(分担執筆)" 丸善(印刷中),

    • Related Report
      1998 Annual Research Report
  • [Publications] R.Masuda: "Genetic characteristics of endangered Japanese Golden Eagles(Aquila chrysaetos japonica),based on mitochondrial DNA D-loop sequences and karyotypes." Zoo Biology. (in Press).

    • Related Report
      1997 Annual Research Report
  • [Publications] J.Nagata: "Genetic variation and population structure of the Japanrse sika deer (Cervus nippon) in Hokkaido Island,based on mitochondrial D-loop sequences." Molecular Ecology. (in Press).

    • Related Report
      1997 Annual Research Report
  • [Publications] S.Ohdachi: "Biogeographical history of northeastern Asiatic soricine shrews(Insectivora,Mammalia)." Researches on Population Ecology. (in Press).

    • Related Report
      1997 Annual Research Report
  • [Publications] M.Noro: "Molecular phylogenetic inference of the woolly mammoth Mammuthus primigenius,based on complete sequences of mitochondrial cytochrome b and 12S ribosomal RNA genes." Journal of Molecular Evolution. 46. 314-326 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] S.Ohdachi: "Phylogeny of Eurasian soricine shrew(Insectivora,Mammalia)inferred from the mitochondrial cytochrome b gene sequences." Zoological Science. 14. 527-532 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 増田隆一: "日本産食肉目の種名の検討" 哺乳類科学. 37. 87-93 (1997)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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