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Analysis of the signal transduction of the formation of subcellular organelles, peroxisomes

Research Project

Project/Area Number 09660081
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

UEDA Mitsuyoshi  Kyoto University, Graduate School of Engineering, Associate Professor, 工学研究科, 助教授 (90183201)

Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 1998: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 1997: ¥2,000,000 (Direct Cost: ¥2,000,000)
KeywordsSubcellular organelle / Peroxisomes / Signal transduction / Yeast / Control of gene expression / Homologous recombination / Cascade / Oleic acid
Research Abstract

Candida tropicalis is an asporogenic diploid yeast which is characterized by its ability to utilize n-alkanes as a sole carbon and energy source. In assimilating n-alkanes, C.tropicalis shows a change in its intracellular structure by proliferating a large number of peroxisomes. Peroxisomes are versatile, single-membrane-bound organelles occurring in most of eukaryotic cells. Concomitant with peroxisome proliferation, the activities of peroxisomal enzymes are induced in n-alkane-grown cells. On the other hand, they are synthesized at low rate or not at all in glucose-grown cells. This phenomenon is called as glucose repression. Isociterate lyase (ICL), a key enzyme of the glyoxylate cycle being localized in peroxisomes, is under the control of glucose repression. Promoters of Saccharomyces cerevisiae controlled by the glucose repression mechanism were used to search for cis-regulatory elements responsible for derepression of gene expression. Various trans-acting factors which are invol … More ved in the genetic regulation of the glucose repression in S.cerevisiae, were also identified. The fact that UPR-ICL-mediated transcription of C.tropicalis is still glucose-repressive in S.cerevisiae demonstrates that similar mechanisms are commonly existing in both of the yeast strains concerning the regulation of ICL gene. A mutant was isolated that failed to derepress the UPR-ICL-mediated gene expression in acetate medium, and the gene (FILl) that complemented this mutation was isolated. The fill null mutant in which FILl is disrupted could not grow on acetate or ethanol, and the derepression of the isocitrate lyase encoded by ICLl in S.cerevisiae was also defected. The amino acid sequence of Fillp (230 amino acids) showed similarity to ribosome recycling factors (RRFs) of prokaryotes. Compared to prokaryotic RRFs, Fil ip had an N-terminal 46 amino acid extension which was shown to be able to function as a mitochondrial targeting sequence. The subcellular fractionation of the DELTAfil 1 strain showed that protein constituents of the mitochondrial fraction of the DELTAfil 1 strain differed from those of the wild type strain, but resembled those of chloramphenicol-treated cells or rho。 cells. These results suggest that Fillp is necessary for protein synthesis in mitochondria of S.cerevisiae. The results indicate the presence of a communication pathway between mitochondria and the nucleus which represses expression of genes encoding the key enzymes of the glyoxylate cycle and gluconeogenic pathway when there is a deficiency in the mitochondrial respiratory chain. Less

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (24 results)

All Other

All Publications (24 results)

  • [Publications] M.Ueda et al: "Characterization of the intron-containing citratehase syntgene from the alkanotrophic yeast Candida tropicalis" Arch.Microbiol. 168. 8-15 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al: "Two distinct regulatory pathways control derepression of UPR-ICL-mediated gene expression in Saccharomyces cerevisiae" Eur.J.Biochem.243. 748-752 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al: "Analysis of carbon source-regulated gene expression by the upstream region o the coadida tropicalis malate symthase gene" Biochim.Biophys.Acta. 1350. 80-88 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al: "Genetic evaluation of physiological functions of thiolase isozymes in n-alkane-assimilating yeast, Candida tropicalis" J.Bacteriol.180. 690-698 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al: "Peroxisomal and mitochondrial carnitine acetyltransferase isozymes of the n-alkane-assimilating yeast C.tropicalis" Biochim.Biophys.Acta. 1397. 213-222 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al: "A regulatory factor, Fillp, involved in derepression of isocifrate lgase gene in S.cerevisiae : a possible mitochondrial protein" Eur.J.Biochem. 256. 212-220 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al.: "Characterization of the intron-c ontaining citrate synthase gene from the alkanotrophic yeast Candida tropicalis" Arch.Microbiol.168. 8-15 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al.: "Two distinct regulatory pathways control derepression of UPR-ICL-meidated gene expression in Saccharomyces cerevisiae" Eur.J.Biochem.243. 748-752 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al.: "Analysis of carbon Source-regulated gene expression by the upstream region of the Candida tropicalis malate synthase gene" Biochim.Biophys.Acta. 1350. 80-88 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al.: "Genetic evaluation of physiological functions of thiolase isozymes in n-alkane-assimilating yeast, Candida tropicalis" J.Bacteriol. 180. 690-698 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al.: "Peroxisomal and mitochondrial carnitine acetyltransferase isozymes of the n-alkane-assimilating yeast, C.tropicalis" Biochim.Biophys.Acta. 1397. 213-222 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al.: "A regulatory factor, Fillp, involved in derepression of isocitrate lyase gene in S.cerevisiae : a possible mitochondrial protein" Eur.J.Biochem.156. 212-220 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Ueda et al.: "Gonetic evaluation of physiological functions of thiolase isozymes in n-alkane-assinilating yeast,Candida tropicalis" J.Bacteriol.180・3. 690-698 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] M.Ueda et al.: "Peroxisonal and mitochondrial carnifine aotyltransferase isozymes of the n-alkane-assimilating ueast,Candida tropicalis,occurred by alternative initiation" Biochimica et Biophysica Acta. 1397・2. 213-222 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] M.Ueda et al.: "Expression and subcellular localization of Candida tropicalis Catalase in catalase gene disruptants of Saccharomyces cerevisiae" J.Ferment.Bioeng.85・6. 571-578 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] M・Ueda et al.: "A regulatory factor,Fillp,involved in derepression of isocitrate lzase gene in Saccharomyces cerevisiae:a possible mitochondrial protein" Eur.J.Biochem.256・1. 212-220 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] M.Ueda et al.: "Sorting of Peroxisomal and Mitochondrial Carnitine Acetyltransferas Isotymes in the diploid yeast,Candida tropicalis" Cell Biochem.Biophys.(in press).

    • Related Report
      1998 Annual Research Report
  • [Publications] M.Ueda et al.: "Genetic evaluation of Peroxisomal and cytosolic acetoacetyl-CoA thiolase isozymes in n-alkane-assimilating diploid yeast,Citropicalis" Cell Biochem.Biophys.(in press).

    • Related Report
      1998 Annual Research Report
  • [Publications] Mitsuyoshi Ueda et al.: "Characterization of the intron-containing citrate synthase gene from the alkanotrophic yeast Candida tropicalis" Arch.Microbiol.168.1. 8-15 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ken Umemura et al.: "Two distinct regulatory pathways control derepression of UPR-ICL-mediated gene expression in Saccharomyces cerevisiae" Eur.J.Biochem.243.3. 748-752 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Ken Umemura et al.: "Analysis of carbon source-regulated gene expression by the upstream region of the Candida tropicalis malate synthase gene" Biochim.Biophys.Acta. 1350.1. 80-88 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Naoki Kanayama et al.: "Expression of acetoacetyl-CoA thiolase isozyme genes of n-alkane-assimilating yeast,Candida tropicalis" J.Biochem.122.3. 616-621 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Toshiya Imajo et al.: "Immunochemically distinct NADP-linked isocitrate dehydrogenase isozymes in mitochondria and peroxisomes of Candida tropicalis" Arch.Microbiol.168.5. 389-395 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Hiroyuki Kawachi et al.: "Gene analysis of an NADP-linked isocitrate dehydrogenase localizell in peroxisomes of the n-alkane-assimilating yeast C.tropicalis" Eur.J.Biochem.250,1. 205-211 (1997)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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