• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Identification of the gate structure of ion channels

Research Project

Project/Area Number 09680664
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionOkazaki National Research Institutes

Principal Investigator

OIKI Shigetoshi  National Institute for Physiological Sciences, Department of Cellular and Molecular Physiology, Okazaki National Research Institutes, Associate Professor, 生理学研究所, 助教授 (10185176)

Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 1998: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 1997: ¥2,200,000 (Direct Cost: ¥2,200,000)
Keywordsinward rectifier / hyperpolarization / surface potential / open channel block / kinetics / ブロック / 単一チャネル記録 / 電位依存性 / ゲーティング / ブロッカー
Research Abstract

In 1998 the crystal structure of the potassium channel was elucidated by MacKinnon's group and the structural parts of the gate was directly demonstrated. Based on this structural information some mutations were introduced into two kinds of potassium channels (Kir2.1, KAT1). For the inwardly rectifying potassium channels (Kir2.1) three charged residues exist in the loop between the pore helix and the inner helix. The negatively charged residues (AspィイD1152ィエD1, GluィイD1153ィエD1) were neutralized. We developed a method to evaluate the surface potential from the shift of the chord conductance-voltage curves. It was found that GluィイD1153ィエD1 modified the affinity of MgィイD12+ィエD1 ion and reduced the surface potential, thus decreasing the single channel conductance. When the concentration of external MgィイD12+ィエD1 was increased the open channel blocking appeared. From the kinetic analyses of the single channel recordings under MgィイD12+ィエD1 blocking condition it was suggested that MgィイD12+ィエD1 ion in the blocked state inhibited the closure of the gate. In the KAT1 channel a mutation in the C-terminal end of the pore helix (T256) altered the activation kinetics upon hyperpolarization. It was revealed that the transition rate between the closed state and the open state was susceptible to the mutation.

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] Saburou, Okada, Oiki: "Two-sided action of protons on an inward rectifier K^+channel(IRK1)"Pflugers Archive. 433. 428-434 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Saburou, Tominaga, Miwa Okada, Oiki: "A conserved arginine resudue in the poreregion of an inward rectifier K channel(IRK1) as an eternal barrier for cationic blockers"J. Gen. Physiol. 110. 665-677 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Liu, Oiki, Tsumura, Shimizu, Okada: "Glibenclamide blocks volume-sensitive Cl channels by dual mechanisms"Am. J. Physiol.. 275. C343-C351 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Okada, Oiki, Hazama, Morishima: "Criteria for the molecular identification of the volume-sensitive outwardly rectifying Cl^-channel"J. Gen. Physiol. 112. 365-367 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 老木成稔: "イオン流で探るチャネルポアのプロファイル"膜. 22. 307-315 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 老木成稔: "Kチャネルの結晶構造に至る道"蛋白質・核酸酵素. 43. 1990-1997 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Oiki, Koeppe, Andersen: "Towards Molecular Biophysics of Ion Channels"Elsevier. 307 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 老木成稔: "シリーズ・ニューバイオフィジックス(5)イオンチャネル"共立出版. (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Sabirov, R.Z., Okada, Y. and Oiki, S.: "Two-sided action of protons on an inward rectifier KィイD1+ィエD1 channel (IRK1)"Pflugers Arch.. 433. 428-434 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Liu, Y., Zhao, J., Ji, Y.-H., Oiki, S., Hazama, A., Morishima, S., Sabirov, R.Z., Zhou, S.-S., Hayashi, S., Tsumura, T., Ito, T., Furuya, K. and Okada, Y.: "The venom of Scorpion B. martensi selectively inhibits transient outward KィイD1+ィエD1 currents in neonatal rat ventricular cells and KィイD2vィエD2ィイD1+ィエD1 channel currents in NG108-15 cells"Biomed. Res.. 18. 383-388 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Sabirov, R.Z., Tominaga, T., Miwa, A., Okada, Y. and Oiki, S.: "A conserved arginine residue in the pore region of an inward rectifier K channel (IRK1) as an external barrier for cationic blockers"J. Gen. Physiol.. 110. 665-677 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Liu, Y., Oiki, S., Tsumura, T., Shimizu, T. and Okada, Y.: "Glibenclamide blocks volume-sensitive Cl channels by dual mechanisms"Am. J. Physiol.. 275. C343-C351 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Okada, Y., Oiki, S., Hazama, A., Morishima, S.: "Criteria for the molecular identification of the volume-sensitive outwardly rectifying Cl- channel"J. Gen. Physiol.. 112. 365-367 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Oiki, S.: "Probing channel pore through ionic current"MEMBRANE. 22. 307-315 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Oiki, S.: "Towards the crystal structure of potassium channels : The pore structure of selective permeation of K ions"Tanpakushitu Kakusan Koso. 43. 1990-1997 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] R.Z.Sabirov: "Two-sided action of protons on an inward rectifier K^+ channel." Pflugers Arch.433. 428-434 (1997)

    • Related Report
      1998 Annual Research Report
  • [Publications] R.Z.Sabirov: "A conserved arginine residue in thepore region of an inwardrectifier Kchannel" J.Gen.Physiol.110. 665-677 (1997)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Liu: "Glibenclamide blocks volume-sensitive Cl channels by dual mechanisms." Am.J.Physiol. 275. C343-C351 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Okada: "Criteria for the molecular ideutification of the volune-sensitive Cl" J.Gen.Physiol.112. 365-367 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 老木成稔: "イオン流で探るチャネルポアのプロファル" 膜. 22. 307-315 (1997)

    • Related Report
      1998 Annual Research Report
  • [Publications] 老木成稔: "Kチャネルの結晶構造に至る道" 蛋白質核酸酵素. 43. 1990-1997 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 老木成稔: "シリーズ・ニューバイオフィジックス(5)イオンチャネル" 共立出版, 210 (1997)

    • Related Report
      1998 Annual Research Report
  • [Publications] Oiki: "Cell Volume Rogalation:The Molecular Mechanism" Elesevier, 214 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Sabirou, Tominaga, Miwa, Okada, Oiki: "A conserved arginine residue in the pore region of an innord rectifier K channel(IRKI) as an ecternal barrier for cationic blochers." J.General Physicology. 110. 665-677 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Liu, Zhao, Ji, Oiki et al: "Therenom of scorpion B.martensi sepatively inhibits transient outuard K^+ rcurrents in neonatsl rat ventricular cells and K^+ channel currents" Biomed Res.18. 383-385 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Sabirou, Okada, Oiki: "Two-sided action of protons on aninward rectifir K^+" Pflugers Arch.433. 428-434 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Oiki, Koeppe, Andersen: "Towards Moleculer Biophysics of Ion Channels" Elsevier, 307 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 老木成稔: "シリーズ-ニューバイオフィジックス(5)イオンチャネル" 共立出版, 224 (1997)

    • Related Report
      1997 Annual Research Report

URL: 

Published: 1997-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi