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Mechanism integrating regulation of DNA replication with specific gene expression during the course of cell differentiation

Research Project

Project/Area Number 09680666
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionIwate University

Principal Investigator

TSUTSUMI Ken-ichi  Iwate University, Faculty of Agriculture, Professor, 農学部, 教授 (40113964)

Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥2,600,000 (Direct Cost: ¥2,600,000)
Fiscal Year 1998: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 1997: ¥1,600,000 (Direct Cost: ¥1,600,000)
KeywordsDNA replication / replication origin / gene expression / promoter / cell cysle / rat / 複製開始 / 転写プロモーター / DNAヘリカーゼ / 肝細胞
Research Abstract

Promoter region of the rat aldolase B (A ldB) gene has an important role in liver-specific transcription. In addition, this DNA region has been shown to acts as an initiation region of DNA replication in cells that do not transcribe the AldB gene. In order to know significance of functional switch of this promoter/origin region during cell differentiation, we tried to determine cis-elements required for initiation of DNA replication and to characterize their roles.
We found that, firstly. the promoter/origin region has an overlapping set of cis-elements for transcription and replication. In cells in which the AldB gene is actively transcribed, repliction initiates from a region other than the promoter region. Secondly, cis-elements for replication bind proteins in a cell cycle-dependent manner. Thirdly, DNA regions that associates with nuclear matrix differed between AldB-expressing and non-expressing cells, indicating different architecture of chromosomal domain. The promoter/origin region in AldB non-expressing cells, the origin region associates with nuclear matrix, while it does not in AldB-expressing cells.
These results do not argue against our model where an array of firing origins on the chromosome tightly links the pattern of genes being transcribed, and the positional change of the firing origins are involved in changes of specific gene expression during cell differentiation. To ascertain the above possibility, positioning of firing origins should be determined within a broad range of chromosomal region encompassing the AldB promoter/origin, with respect to distribution of genes that are actively transcribed. It is also interesting to consider that association of replication origins with nuclear matrix causes alteration of chromosomal domains that leads to transcriptional regulation.

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (7 results)

All Other

All Publications (7 results)

  • [Publications] 堤 賢一: "Initiation of DNA replication at the rat aldolase B locus" Gene Therapy and Moleculer Biology. 1. 599-608 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 堤 賢一: "Sequence requirement for replication initiation at the rat aldolase Blocis impticated in its functional correlation with transcriptional regulation" Biochem.Biophys.Res.Commun.237. 707-713 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] K.Tsutsumi, and Zhao, Y.: "Initiation of DNA replication at the rat aldolase B locus-an overlapping set of DNA elements regulates transcription and replication?" Gene Ther.Mol.Biol.1. 599-608 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Y.Zhao, S.Miyagi, T.Kikawad and K.Tsutsumi: "Sequence requirement for replication initiation at the rat aldolase B locus implicated in its functional correlation with transcriptional regulation." Biochem.Biophys.Res.Commun.237. 707-713 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 堤 賢一: "Initiation of DNA replication at the rat aldolase B locus" Gene Therapy and Molecular Biology. 1. 599-608 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 堤賢一: "Sequence requirement for replication at the rat aldolase B locus implicated mlts fermtianal cerrelation ceith transcriptional regulation" Biochem.Biophys.Res.Commun.237. 707-713 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 堤賢一: "Initiation of DNA replication at the rat aldolase B locus" Gene Therapy and Molecular Biology. 1. 599-608 (1998)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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