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Photobiological significance of DNA photolgase/Blue-light photoreceptor family

Research Project

Project/Area Number 09833003
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 光生物学
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

TODO Takeshi  Radiation Biologg Center, Associate Professor, KYOTO UNIVERSITY, 放射線生物研究センター (90163948)

Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥2,300,000 (Direct Cost: ¥2,300,000)
Fiscal Year 1998: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1997: ¥1,500,000 (Direct Cost: ¥1,500,000)
KeywordsDNA Repair / UV damage / (6-4)Photolyase / Cryptochrome / CRY / Blue light photoreceptor / Circadian Rhythm / 光回復酵素
Research Abstract

We report isolation of a Xenopus laevis (6-4)photolyase gene, and show that the (6-4)photolyase binds noncovalently to stoichiometric amounts of FAD.Xenopus (6-4) photolyase binds with high affinity to DNA bearing a (6-4) photoproduct and repairs it in a light-dependent reaction. To clarify its repair mechanism of (6-4) photolyase, we determined its binding and catalytic properties using synthetic DNA substrate which carries a photoproduct at a single location. The (6-4)photolyase binds to T[6-4]T in double stranded DNA with high affinity (kD = 10_<-9>) and to T[6-4]T in single stranded DNA and T[Dewar]T in double- and single-stranded DNA although with slightly lower affinity (k_D = -2 x 10_<-8>). Majority of the T[6-4]T (6-4) photolyase-complex dissociates very slowly (koff = 2.9 x 10_<-5 S-1>). Its absolute action spectrum without a second chromophore in the 350-600 nm region closely matches the absorption spectrum of the enzyme. The quantum yield (f) of repair is approximately 0.11. … More The fully reduced form (E-FADH-) of (6-4)photolyase is catalytically active. Direct analysis of the photoreactivated product showed that (6-4) photolyase restores the original pyrimidines. These findings demonstrate that CPD photolyase and (6-4)photolyase are quite similar, but they are different with regard to the binding properties.
Light is the major environmental signal for the entrainment of circadian rhythms. Light signals can entrain these rhythms by shifting their phases. However, little is known about the molecular mechanism for the perception and transduction of the light signal. The members of the photolyase/cryptochrome family contain flavin adenine dinucleotide (FAD) as chromophore and are involved in two diverse functions, DNA repair and photoreception of environmental light signals. We report the cloning of a new member of this family, dcry, from Drosophila. Northern blot analysis shows that this gene is expressed in various tissues. . The dcry mRNA is expressed in a circadian manner in adult heads, while such rhythmic fluctuation is abolished in the clock-defective per0 and tim0 mutants. The circadian expression damps in constant darkness. Over-expression of the dcry gene alters the light-induced phase delay in the locomotor activity rhythms of flies. These results suggest that DCRY is a circadian photoreceptor and its expression is regulated by circadian clock genes.. Less

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (31 results)

All Other

All Publications (31 results)

  • [Publications] T., Todo et al.: "Flavin adenine dinucleotide as a chromophore of the Xenopus(6-4)photolyase." Nucleic Acids Res.25. 764-768 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] N.Uchida et al.: "Photoreactivating enzyme for (6-4) photoproducts in the cultured goldfish cells." Photochem. Photobiol.65. 964-968 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] S., Kanai et al.: "Molecular evolution of the photolyase-blue light photoreceptor family." J.Molecular Evolution. 45. 535-548 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T.,Todo et al.: "Characterization of a human homolog of(6-4)photolyase." Mutat. Res.384. 195-204 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T., Todo et al.: "Non-mutagenic repair of(6-4)photo products by (6-4) photolyase purified from Drosophila melanogaster." Mutat. Res.385. 83-93 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] K., Hitomi et al.: "Binding and catalytic properties of Xenopus(6-4)photolyase." J.Biol.Chem.272. 32591-32598 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] S., Nakajima et al.: "Cloning and characterization of a gene(UVR3)required for photorepair of 6-4 photoproducts in Arabidopsis thaliana." Nucleic Acids Res.26. 638-644 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M., Kai et al.: "A new Drosophila ultraviolet light-damaged DNA recognition endonuclease that selectively nicks a(6-4)photoproduct site." Biochim. Biophys. Acta. 1397. 180-188 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T., Mizukoshi et al.: "Studies on the Chemical Synthesis of Oligonucleotides Containing the(6-4)Photoproduct of Thymine-Cytosine and Its Repair by(6-4)Photolyase" J.Am.Chem. Soc.120. 10634-10642 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T., Ishikawa et al.: "DCRY is a Drosophila photoreceptor protein implicated in light entrainment for circadian rhythm." Genes to Cells. 4. 57-66 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T,Todo, S.-T.Kim, K.Hitomi, E.Otoshi, T.Inui, H.morikawa, H.Kobayashi, E.Ohtsuka, H.Toh and M.Ikenaga: "Flavin adenine dinucleotide as a chromophore of the Xenopus (6-4) photolyase." Nucleic Acids Res.25. 764-768 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] N.Uchida, H.Mitani, T.Todo, M.Ikenaga and A.shima: "Photoreactivating enzyme for (6-4) photoproducts in the cultured goldfish cells." Photochem.Photobiol. 65. 964-968 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] S.Kanai, R.Kikuno, H.Toh, H.Ryo and T.Todo: "Molecular evolution of the photolyase-blue light photoreceptor family." J.Molecular Evolution. 45. 535-548 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T.Todo, H.Tsuji, E.Otoshi, K.Hitomi, S.-T.Kim and M.Ikenaga: "Characterization of a human homolog of(6-4)photolyase." Mutat.Res.384. 195-204 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T.Todo, H.Ryo, A.borden, C.Lawrence, K.Sakaguchi, H.Hirata and T.Nomura: "Non-mutagenic repair of (6-4) photoproducts by (6-4) photolyase purified from Drosophila melanogaster." Mutat.Res.385. 83-93 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] K.Hitomi, S.-T.Kim, S.Iwai, N.Harima, E.Otoshi, M.Ikenaga and T.Todo: "Binding and catalytic properties of Xenopus (6-4) photolyase." J.Biol.Chem.272. 32591-32598 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] S.Nakajima, M.Sugiyama, S.Iwai, K.Hitomi, E.Otoshi, S-T.Kim, C-Z.Jiang, T.Todo, A.B.Britt and K.Yamamoto: "Cloning and characterization of a gene(UVR3) required for photorepair of 6-4 photoproducts in Arabidopsis thaliana." Nucleic Acids Res. 26. 638-644 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] M.Kai, T.Todo, M.Wada, H.Ryo, C.Masutani, H.kobayashi, H.Morioka, E.Ohtsuka, F.Hanaoka, K.Sakaguchi: "A new Drosophila ultraviolet light-damaged DNA recognition endonuclease that selectively nicks a (6-4) photoproduct site." Biochim.Biophys.Acta. 139 7. 180-188 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T.Mizukoshi, K.Hitomi, T.Todo, and S.Iwai: "Studies on the Chemical Synthesis of Oligonucleotides Containing the(6-4)Photoproduct of Thymine-Cytosine and Its Repair by (6-4) Photolyase" J.Am.Chem.Soc.120(41). 10634-10642 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] T.Ishikawa, A.Matsumoto, T.Kato Jr., S.Togashi, H.Ryo, M.Ikenaga, T.Todo, R.Ueda, T.Tanimura: "DCRY is a Drosophila photoreceptor protein implicated in light entrainment for circadian rhythm." Genes to Cells. 4. 57-66 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] 藤堂 剛: "青色光受容タンパク質としての光回復酵素" 実験医学. 16巻8号. 1062-1068 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] S.Nakajima et al.: "Cloning and characterization of a gene (UVR3) required for photorepair of 6-4 photoproducts in Arabidopsis thaliana." Nucleic Acids Res.26. 638-644 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] M.Kai et al.: "A New Drosophila ultraviolet light-damaged DNA recognition endonuclease that selectively nicks a (6-4) photoproduct site." Biochim.Biophys.Acta. 1397. 180-188 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Mizukoshi et al.: "Studies on the Chemical Synthesis of Oligonucleotides Containing the (6-4) Photoproduct of Thymine-Cytosine and Its Repair by (6-4) Phytolyase" J.Am.Chem.Soc.120(41). 10634-10642 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Ishikawa et al.: "DCRY is a Drosophila photoreceptor protein implicated in light entrainment for circadian rhythm." Genes to Cells. 4. 57-66 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] T.Todo et al.: "Flavin adenine dinucleotide as a chromophore of the Xenopus(6-4)photolgase." Nucleic Acids Res.25. 764-768 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] N.Uchida.et al.: "Photoreactivating enzyme for(6-4)photoproducts in the cultured gold fish cells." Photochem.Photokiol.65. 964-968 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] S.Kanai et al.: "Molecular evalution of the photolyase-blue light photoreceptor family." J.Molecular Evolation. 45. 535-548 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] T.Todo et al.: "Characterization of a human homolog of(6-4)photolyase." Mutat.Res.384. 195-204 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] T.Todo et al.: "Non-mutagenic repair of(6-4)photopraducts by(6-4)photolyase parified from Drosuphila melahogatder." Matat.Res.385. 83-93 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] K.Hitomi et al.: "Binding and catalytic properties of Xemopus(6-4)photolyase." J.Biol.Chem.272. 32591-32598 (1997)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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