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Study of the cytoskeleton and lipid biosynthetic system of an archaeon Thermoplasma

Research Project

Project/Area Number 09839033
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 自然史科学
Research InstitutionTOKYO UNIVERSITY OF PHARMACY AND LIFE SCIENCE

Principal Investigator

YAMAGISHI Akihiko  Tokyo University of Pharmasy and Life Science, School of Life Science, Associate professor, 生命科学部, 助教授 (50158086)

Co-Investigator(Kenkyū-buntansha) ARAKAWA Hideo  Tokyo Institute of Technology, Department of Life Science, 生命理工学部, 助手 (80211704)
Project Period (FY) 1997 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥2,700,000 (Direct Cost: ¥2,700,000)
Fiscal Year 1999: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 1998: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1997: ¥1,200,000 (Direct Cost: ¥1,200,000)
KeywordsThermoplasma / cytoskeleton / Archaea / archaebacteria / etherlipid / terbinafine / tetraetherlipid / Thermoplasma / 原子間力顕微鏡 / テルビナフィン / テトラエーテル / ジエーテル / 好熱好酸古細菌
Research Abstract

(1) Cytoskeleton-like structures of Thermoplasma were biochemically analyzed. Cells of Thermoplasma were treated by non-ionic detergent Triton X-100. The solubilized proteins were fractionated by the combination of anion-exchange-column chromatography and gel-exclusion chromatography. Several fractions of proteins that can reversibly polymerize were recovered. Tubular structures and net-like structures were found in some of those fractions by electron microscopic inspection. Peptide composition of the fractions was analyzed by SDS-polyacrylamide gel electophoresis.
(2) Carbon 14-labeled mevalonic acid was used to trace the biosynthetic pathway of ether-membrane lipids in Thermoplasma. Polar ether-lipid fraction of Thermoplasma was extracted from the cells grown in the presence of C14-mevalonic acid. The extracted ether-lipids were analyzed by two-dimensional thin layer chromatography. Lipids were recovered from respective spot of TLC plates and the structures of the lipids were analyzed and estimated. After 2-h incubation, major polar tetraetherlipid, which has phosphatidylglycerol and a sugar molecule, was accumulated in the cells. In the presence of the inhibitor terbinafine, biosynthesis of the major polar lipid was inhibited and a diether lipid was accumulated. After the removal of the inhibitor, biosynthesis of polar lipids was analyzed by thin layer chromatography. The model of the biosynthetic pathway of the tetra-lipids was proposed.

Report

(4 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • 1997 Annual Research Report
  • Research Products

    (26 results)

All Other

All Publications (26 results)

  • [Publications] Motono, C.,: "Urea-induced unfolding and conformational stability of 3-isopropylmalate dehydrogenase from the thermophile Thermus thermophilus and its mesophilic counterpart from Escherichia coli."Biochemistry. 38. 1332-1337 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tamakoshi, M: "An efficient gene replacement and deletion system for an extreme thermophile, Thermus thermophilus."FEMS Microbiol. Lett.. 173. 431-437 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Akanuma S.: "Further improvement of the thermal stability of a partially stabilized Bacillus subtilis 3-isopropylmalatedehydrogenase variant by random and site-directed mutagenesis."Eur. J. Biochem.. 260. 499-504 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 山岸明彦: "進化分子工学を利用した蛋白質分子育種の実例 3)耐熱性酵素の低温適応"化学と生物. 38. 118-121 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] 第13回「大学と科学」公開シンポジウム組織委員会編: "生きている地球の新しい見方 : 地球・生命・環境の共進化"クバプロ. 202 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Motono, C., A. Yamagishi, and T. Oshima: "Urea-induced unfolding and conformational stability of 3-isopropylmalate dehydrogenase from the thermophile Thermus thermophilus and its nesophilic counterpart from Escherichia coli."Biochemistry. 38. 1332-1337 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tamakoshi, M., Yaoi T., Oshima, T., and Yamagishi, A.: "An efficient gene replacement and deletion system for an extreme thermophile, Thermus thermophilus."FEMS Microbiol. Lett.. 173. 431-437 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Akanuma S., Yamagishi A., Tanaka N., Oshima T.: "Further improvement of the thermal stability of a partially stabilized Bacillus subtilis 3-isopropylmalatedehydrogenase variant by random and site-directed mutagenesis."Eur J Biochem.. 260. 499-504 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Motono,C.,: "Urea-induced unfolding and conformational stability of 3-isopropylmalate dehydrogenase from the thermophile Thermus thermophilus and its mesophilic counterpart from Escherichia coli"Biochemistry. 38. 1332-1337 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Tamakoshi,M.: "An efficient gene replacement and deletion system for an extreme thermophile, Thermus thermophilus"FEMS Microbiol.Lett.. 173. 431-437 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Akanuma S.: "Further improvement of the thermal stability of a partially stabilized Bacillus subtilis 3-isopropylmalatedehydrogenase variant by random and site-directed mutagenesis"Eur.J.Biochem.. 260. 499-504 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 山岸明彦: "進化分子工学を利用した蛋白質分子育種の実例3)耐熱性酵素の低温適応"化学と生物. 38. 118-121 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] 第13回「大学と科学」公開シンポジウム組織委員会編: "「生きている地球の新しい見方:地球・生命・環境の共進化"クバプロ. 202 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 山岸明彦: "遺伝子分析による脂質合成系の進化の解析" 日本油化学会誌. 47. 79-85 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 山岸明彦: "生命史を語る古細菌" Microb.Environm.13. 237-243 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 磯崎行雄: "初期生命の実像:野外地質学と分子生物学からのアプローチ" 化学(岩波). 68. 821-828 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Shinzato, N.: "Phylogenetic diversity of symbiotic methanogens living in the hindgut of the lower termite Reticulitermes speratus analyzed by PCR and in situ hybridization." Appl.Environ.Microbiol.65. 837-840 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] 古賀洋介 編: "古細菌の生物学" 東京大学出版会, 302 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] J.Wiegel 編: "Thermophiles: The key to molecular evolution and the origin of life?" Taylor & Francis Ltd., London, 346 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Suzuki,T.: "Molecular and phylogenetic characterization of isopropylmalate dehydrogenase of a thermoacidophilic archaeon,Sulfolobus sp.strain 7" J.Bacteriol.179. 1174-1179 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Wallon,G.: "Purification,catalytic properties and thermostability of 3-isopropylmalate dehydrogenase from Escherichia coli" Biochim.Biophys.Acta,. 1337. 105-112 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Tamakoshi,M.: "A new Thermus-Escherichia coli shuttle integration vector system" J.Bacteriol.179. 4811-4814 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Suzuki,T.: "Screening of a mutant plasmid with high expression efficiency of GC-rich leuB gene of an extreme thermophile,Thermus thermophilus,in Eschericha coli" J.Biochem.121. 1031-1034 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Akanuma,S.: "Effect of polar side chains at position 172 on thermal stability of 3-isopropylmalate degydrogenase from Thermus thermophilus" FEBS Lett.410. 141-144 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 山岸明彦: "古細菌Methanococcus jannaschiiの全塩基配列の意義" 蛋白質・核酸・酵素. 42(2). 76-79 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] deBruijn,F.,J.: "Bcterial Genomes : Physical Structure and Analysis" Chapman & Hall,New York, 793 (1997)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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