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Proteins as functional elements of the machinery for the post-Golgi transport network

Research Project

Project/Area Number 10215208
Research Category

Grant-in-Aid for Scientific Research on Priority Areas (B)

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionOKAZAKI NATIONAL RESEACH INSTITUTES (2001)
Okazaki National Research Institutes (1998-2000)

Principal Investigator

YOSHIMORI Tamotsu  National Institute of Genetics, Professor, 細胞遺伝研究部門, 教授 (60191649)

Co-Investigator(Kenkyū-buntansha) HORIUCHI Hisanori  Graduate School of Medicine Kyoto University, Assistant Professor, 医学研究科, 助手 (90291426)
Project Period (FY) 1998 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥58,000,000 (Direct Cost: ¥58,000,000)
Fiscal Year 2001: ¥13,500,000 (Direct Cost: ¥13,500,000)
Fiscal Year 2000: ¥16,200,000 (Direct Cost: ¥16,200,000)
Fiscal Year 1999: ¥15,300,000 (Direct Cost: ¥15,300,000)
Fiscal Year 1998: ¥13,000,000 (Direct Cost: ¥13,000,000)
KeywordsAutophagy / Autophagosomes / Apg proteins / ES cells / Accumulation of abnormal proteins / Platelet / Granule release / PKCα / エンドソーム / SKD1 / Beclin / Rab4 / 小胞輸送 / 優性阻害変異体 / 輸送再構成形 / 顆粒放出反応 / RabGTPase / AAA型ATPase / GFP / 受容体再循環 / Rab蛋白質 / Aab5 overlay法 / Aab5結合蛋白質
Research Abstract

1) Autophagy : We found that binding of the Apg12-Apg5 conjugate to the precursor membranes is required for formation of autophagosomes. Furthermore, we showed that the conjugate forms a large complex (about 700kDa) together with other proteins. We purified one component of the complex and determined its amino acids sequence; it is a 63kDa novel protein, which binds to Apg5 at its N-terminal region. We also demonstrate that GATE 16 and GABARAP, homologues of the autophagosome peripheral membrane protein LC3, are processed in the same way as LC3 and localize to the autophagosomal membranes. Finally, we found that the unfolded protein accumulation is accelerated in the Apg5-deficient cells, suggesting that autophagy is involved in exclusion of abnormal proteins.
2) Secretion in platelet : We established a in vitro reconstitution system for assaying release of serotonin stored in the dense-core granules and von Willebrand factor stored in the α granules by using the platelet whose plasma membrane are permeabilized by Streptolysin-O. Their secretion was dependent on ATP and cytosol. We purified the cytosolic factor required for the secretion and identified it as PKCα. Since PKCα was not sufficient to reconstitute the release, we are trying to identify other factors necessary for the release.

Report

(5 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] Kihara A, et al.: "Beclin-phosphatidylinositol 3-kinase complex functions at the trans-Golgi network"EMBO Reports. 2. 330-335 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ishihara N, et al.: "Autophagosome requires specific early Sec proteins for its formation and NSF/SNARE for vacuolar fusion"Mol. Biol. Cell. 12. 3690-3702 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yoshioka, A. et al.: "Identification of protein kinase Cα as an essential, but not sufficient, cytosolic factor for Ca^<2+>-induced α-and dense-core granule secretion in platelets"J. Biol. Chem. 276. 39379-39385 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nishioka, H. et al.: "Small GTPase Rho regulates thrombin-induced platelet aggregation"Biochem. Biophys. Res. Commun.. 280. 970-975 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Lippe R, et al.: "Expression, purification, and characterization of Rab5 effector complex, Rabaptin-5/Rabex-5"Methods Enzymol.. 329. 132-145 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nara A, et al.: "SKD1 AAA ATPase-dependent endosomal transport is involved in autolysosome formation"Cell Struct. Funct.. 27. 29-37 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kihara A, et al.: "Beclin-phosphatidylinositol 3-kinase complex functions at the trans-Golgi network"EMBO Reports. 2. 330-335 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ishihara N, et al.: "Autophagosome requires specific early Sec proteins for its formation and NSF/SNARE for vacuolar fusion"Mol. Biol Cell. 12. 3690-3702 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] A. Yoshioka, et al.: "Identification of protein kinase Cα as an essential, but not sufficient, cytosolic factor for Ca^<2+>-induced α-and dense-core granule secretion in platelets"J. Biol. Chem.. 276. 39379-39385 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Nishioka, et al.: "Small GTPase Rho regulates thrombin induced platelet aggregation"Biochem. Biophys. Res. Commun.. 280. 970-975 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Lippe R, et al.: "Expression, purification, and characterization of Rab5 effector complex, Rabaptin-5/Rabex-5"Methods Enzymol.. 329. 132-145 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Nara A, et al.: "SKD1 AAA ATPase-dependent endosomal transport is involved in autolysosome formation"Cell Struct. Funct.. 27. 29-37 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kihara, A. et al.: "Beclin-phosphatidylinositol 3-kinase complex functions at the trans-Golgi network"EMBO Reports. 2. 330-335 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Ishihara, N. et al.: "Autophagosome requires specific early Sec proteins for its formation and NSF/SNARE for vacuolar fusion"Mol. Biol. Cell. 12. 3690-3702 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yoshioka, A. et al: "Identification of protein kinase Cα as an essential, but not sufficient, cytosolic factor for Ca^<2+>-induced α-and dense-core granule secretion in platelets"J. Biol. Chem.. 276. 39379-39385 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Nishioka, H. et al: "Small GTPase Rho regulates thrombin-induced platelet aggregation"Biochem. Biophys. Res. Commun.. 280. 970-975 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Lippe R. et al: "Expression, purification, and characterization of Rab5 effector complex, Rabaptin-5/Rabex-5"Methods Enzymol.. 329. 132-145 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Nara, A. et al: "SKD1 AAA ATPase-dependent endosomal transport is involved in autolysosome formation"Cell Struct. Funct.. (In press). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kirisako T, et al.: "The reversible modification regulates the membrane-binding state of Apg8/Aut7 essential for autophagy and the cytoplasm to vacuole targetting pathway"J.Cell Biol.. 151. 263-275 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kabeya Y, et al.: "LC3, a mammalian homolog of yeast Apg8p, is localized in autophagosome membranes after processing"EMBO J.. 19. 5720-5728 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Shirakawa R., et al.: "Small GTPase Rab4 regulates Ca2+-induced a-granule secretion in platelets."J.Biol.Chem.. 275. 33844-33849 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Murayama T, et al.: "Overexpression of low density lipoprotein receptor eliminates apolipoprotein B100-containing lipoproteins from circulation and markedly prevents atherogenesisi in apolipoprotein E-deficient mice."Atherosclerosis. 153. 295-302 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Ozaki H., et al.: "Junctional adhesion molecule (JAM) is phosphorylated by protein kinase C upon platelet activation."Biochem.Biophys.Res.Commun.. 276. 873-878 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Mizushima N, et al.: "Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells"J.Cell Biol.. 152. 657-667 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Kihara A, et al.: "Beclin-phosphatidylinositol 3-kinase complex functions at the trans-Goligi network"EMBO reports. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Nishioka H., et al.: "Small GTPase Rho regulates thrombin-induced platelet aggregation."Biochem.Biophys.Res.Commun.. 280. 970-975 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Lippe R, et al.: "Methods Enzymol."Expression, purification, and characterization of Rab5 effector complex, Rabaptin-5/Rabex-5.. 14 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Yoshimori,T. et al.: "The Mouse SKD1, a homologue of Yeast Vps4p, Is Required for Normal Endosomal Trafficking and Morphology in Mammalian Cells"Molecular Biology of the Cell. 11. 747-763 (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] Ozaki,H. et al.: "Combined treatment of TNF-a and INF-g causes redistribution of junctional adhesion molecule in human endothelial cells."J.Immunol.. 163. 553-557 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Yoshida,H. et al.: "Copensated endocytosis of LDL by hamster cells co-expredding the two distinct mutant LDL receptors defective in endocyctosis and ligand binding."J.Lipid.Res.. 40. 814-823 (1999)

    • Related Report
      1999 Annual Research Report

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Published: 1998-04-01   Modified: 2018-03-28  

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