• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Transposition and gene regulation of DNA transposable elements in plants

Research Project

Project/Area Number 10216208
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionOkazaki National Research Institutes

Principal Investigator

IIDA Shigeru  National Institute for Basic Biology, Professor, 基礎生物学研究所, 教授 (30012777)

Co-Investigator(Kenkyū-buntansha) TERADA Rie  National Institute for Basic Biology, Research associate, 基礎生物学研究所, 助手 (30137799)
Project Period (FY) 1998 – 2002
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥46,200,000 (Direct Cost: ¥46,200,000)
Fiscal Year 2002: ¥9,500,000 (Direct Cost: ¥9,500,000)
Fiscal Year 2001: ¥9,500,000 (Direct Cost: ¥9,500,000)
Fiscal Year 2000: ¥8,900,000 (Direct Cost: ¥8,900,000)
Fiscal Year 1999: ¥8,800,000 (Direct Cost: ¥8,800,000)
Fiscal Year 1998: ¥9,500,000 (Direct Cost: ¥9,500,000)
KeywordsHigher plants / Transposon / Japanese morning glory / Common morning glory / Rice / Mutable allel / Genetic recombination / Gene targeting / 自然突然変異 / 遺伝子発現調節 / 転移調節因子 / 花弁液胞 / トランスポゾンディスプレイ / 液胞型Na+ / H+交換輸送体 / 自律性転移調節因子 / 非自律性転移調節因子 / Tpn1 / Tip100
Research Abstract

The major DNA-based controlling transposable elements in higher plants can be classified into three groups : the Ac/Ds (or hAT) superfamily, the En/Spm (or CACTA) superfamily, and the Mu family. As floricultural plants, spontaneous mutants of the common morning glory (I. purpurea) displaying either white or reddish flowers were obtained while various spontaneous mutants of the Japanese morning glory (I. nil) exhibiting many different flower colorations were generated. We are trying to identify these spontaneous mutants including mutable alleles conferring variegated flowers. In addition, we also attempted gene targeting by homologous recombination in rice.
The mutable flecked, speckled, r-1, and purple alleles in I. nil were caused by insertions of Tpn1 and its relatives in the En/Spm superfamily, Tpn2, Tpn3, and Tpn4, into the genes for anthocyanin coloration in wers, i.e., DFR-B. CHI, CHS-D, and InNHX1, respectively. Similarly, the flaked and pink mutants of I. purpurea have distantly related elements, Tip1OO and Tip201, in the Ac/Ds superfamily inserted into the CHS-D and F3'H genes, respectively. Concerning gene targeting in rice, an important staple food and a model plant for other cereal species, we have developed a large-scale Agrobacterium-mediated transformation procedure with a strong positive-negative selection and succeeded a reproducible targeting of the Waxy gene by homologous recombination without concomitant occurrence of undesirable ectopic events.

Report

(6 results)
  • 2003 Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (45 results)

All Other

All Publications (45 results)

  • [Publications] S.Iida: "Floricultural traits and transposable elements in the Japanese and common glories."Annals of the New York Academy of Sciences. 870. 265-274 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.Fukada-Tanaka: "Colour-enhancing protein in blue petals."Nature. 407. 581 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] A.Hoshino: "Gene duplication and mobile genetic elements in the morning glories."Gene. 265. 1-10 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] N.Ishikawa: "The transposable element Tip 100 found at the mutable flaked allele for flower variegation of the common morning glory."Molecular General Genomics. 266. 732-739 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] R.Terada: "Efficient gene targeting by homologous recombination in rice."Nature Biotechnology. 20. 1030-1034 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] A.Hoshino: "Spontaneous mutations of the flavonoid 3'-hydroxylase gene conferring reddish flowers in the three morning glory species."Plant and cell Physiology. 44. 990-1001 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 星野 敦: "エピジェネティックス"シュプリンガー・フェアラーク(印刷中). (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.Iida: "Floricultural traits and transposable elements in the Japanese and common glories."Annals of the New York Academy of Sciences. 870. 265-274 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S/Filada-Tamala: "Colour-enhancing protein in blue petals."Nature. 407. 581-3 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] A.Hoshino: "Gene duplication and mobile genetic elements in the morning glories."Gene. 265. 1-10 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] N.Ishikawa: "The transposable element Tip100 found at the mutable flaked allele for flower variegation of the common morning glory."Molecular General Genomics. 266. 732-739 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] R.Terada: "Efficient gene targeting by homologous recombination in rice."Nature Biotechnology. 20. 1030-1035 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hoshino: "Spontaneous mutation of the flavonoid 3'-hydroxylase gene conferring reddish flowers in the three morning glory species."Plant and cell Physiology. 44. 990-1001 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] R.Terada: "Efficient gene targeting by homologous recombination in rice"Nature Biotechnology. 20. 1030-1034 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 石川直子: "アサガオ:園芸植物からモデル植物へ"遺伝(別冊、遺伝学はゲノム情報でどう変わるか). 15. 32-41 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 星野 敦: "アサガオ花弁の液胞pH上昇と青色化"細胞工学別冊、植物細胞工学シリーズ. 17. 85-87 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 星野 敦: "転写調節遺伝子と液胞内pHによる花色の制御"蛋白質・核酸・酵素(増刊号:植物の形づくり). 47. 1745-1752 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 飯田 滋: "特集にあたって"蛋白質・核酸・酵素. 47. 197-199 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 星野 敦: "花を彩る遺伝子"蛋白質・核酸・酵素. 47. 210-216 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] A. Hoshino: "Gene duplication and mobile genetic elements in the morning glories"Gene. 265. 1-10 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] S. Fukada, Tanaka: "Simplified transposon display (STD) : a new procedure for isolation of a gene tagged by a transposable element belonging to the Tpn1 family in the Japanese morning glory"Plant Biotech.. 18. 143-149 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T. Yamaguchi: "Genes encoding the vacuolar Na^+/H^+ exchanger and flower coloration"Plant Cell Physiol.. 42. 451-461 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] K. Toki: "Acylated pelargonidin 3-sophoroside-5-glucosides from the flowers of the Japanese morning glory cultivar 'Violet'"Heterocycles. 55. 1241-1248 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] K. Toki: "A novel acylated pelargonidin 3-sophoroside-5-glucosides from greyish-purple flowers of the Japanese morning glory"Heterocycles. 55. 2261-2267 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] N. Ishikawa: "The transposon Tip100 from the common morning glory is an autonomous element that can transpose in tobacco plants"Mol. Gen. Genet.. 266. 732-739 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] 飯田 滋 他: "植物学が判る。アエラムック(AERA MOOK)"朝日新聞社. 176 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] S.Fukada-Tanaka: "Colour-enhancing protein in blue petals."Nature. 407. 581 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] T.Kojima: "Direct isolation of differentially expressed genes from a specific chromosome region of common wheat Application of the amplified fragment length polymorphism-based mRNA fingerprinting (AMF) method in combination with a deletion line of wheat."Mol.Gen.Genet.. 263. 635-641 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] A.Hasebe: "The novel insertion sequences IS1417,IS1418 and IS1419 from Burkholderia glumae and their strain distribution."Plasmid. 44. 44-53 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] K.Shiokawa: "The functional expression of the CHS-D and CHS-E genes of the common moming glory (lpomoea purpurea) an Escherichia coli and characterization of their gene products."Plant Biotech.. 17. 203-210 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] A.Hoshino: "Gene duplication and mobile genetic elements in the morning glories."Gene. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Fukada-Tanaka: "Simplified transposon display (STD) : a new procedure for isolation of a gene tagged by a transposable element belonging to the Tpn1 family in the Japanese morning glory."Plant Biotech.. (in press). (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] Y. Inagaki: "Genomic organization of the genes encoding dihydroflavonol 4-reductase for flower pigmentation in the Japanese and common morning glories"Gene. 226. 181-188 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] S. Takahashi: "Capturing of a genomic HMG domain sequence by an En/Spm related transposable element Tpnl in the Japanese morning glory"Mol. Gen. Genet. 261. 447-451 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] S. Iida: "Floricultural traits and transposable elements in the Japanese and common morning glories"Annal. New York Acad. Sci.. 870. 265-274 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Y. Johzuka-Hisatomi: "Characterization of the chalcone synthase genes expressed in flowers of the common and Japanese morning glories"Genes Genet. Syst.. 74. 141-147 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] K. Shiokawa: "The functional expression of the CHS-D and CHS-E genes of the common morning glory (Ipomoea purpurea) in Escherichia coli and characterization of their gene products"Plant Biotech. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] S. Iida: "Spontaneous mutagenesis and transposable elements in the Japanese morning glory"Gamma Field Symposia. (in press). (2000)

    • Related Report
      1999 Annual Research Report
  • [Publications] K.Nakai: "Molecular characterization of the gene for dihydroflavonol 4-reductase of Japonicarice varieties." Plant Biotech.15. 221-225 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Habu: "AFLP(amplified restriction fragment length polymorphism)-based mRNA fingerprinting." Plant Biotech.15. 249-251 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Habu: "Molecular characterization of the mutable flaked allele for flower variegation in the common morning glory." Plant J.16. 371-376 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Y.Inagaki: "Genomic organization of the genes encoding dihydroflavonol 4-reductase for flower pigmentation in the Japanese and common morning glories." Gene. 226. 181-188 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] S.Takahashi: "Capturing of a genomic HMG domain sequence by an En/Spm related transposable element Tpnl in the Japanese morning glory." Mol.Gen.Genet.(in press).

    • Related Report
      1998 Annual Research Report
  • [Publications] S.Iida: "Floricultural traits and transposable elements in the Japancse and common morning glories." Annal.New York Acad.Sci.(in press).

    • Related Report
      1998 Annual Research Report
  • [Publications] 飯田 滋: "植物の成長、遺伝子から何が見えるか。" クバプロ, 169 (1998)

    • Related Report
      1998 Annual Research Report

URL: 

Published: 1998-04-01   Modified: 2018-03-28  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi